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The map label for this gene is rfbN [H]

Identifier: 194736822

GI number: 194736822

Start: 2184571

End: 2185515

Strand: Reverse

Name: rfbN [H]

Synonym: SeSA_A2313

Alternate gene names: 194736822

Gene position: 2185515-2184571 (Counterclockwise)

Preceding gene: 194737305

Following gene: 194736193

Centisome position: 46.41

GC content: 37.57

Gene sequence:

>945_bases
ATGAAGATAACATTAATTATTCCCACATATAATGCAGGGTCGCTTTGGCCTAATGTTCTGGATGCGATTAAGCAGCAAAC
TATATATCCGGATAAATTGATTGTTATAGACTCAGGTTCTAAAGATGAAACGGTTCCGTTAGCCTCAGACCTGAAAAATA
TATCAATATTTAATATTGACTCTAAAGATTTTAATCATGGAGGAACCAGGAATTTAGCAGTTGCAAAAACTCTGGACGCT
GATGTTATAATTTTTCTAACGCAAGATGCAATTCTTGCGGATTCGGATGCAATTAAAAATTTAGTTTATTATTTTTCAGA
TCCATTGATAGCAGCGGTTTGTGGTAGACAACTTCCTCATAAAGATGCTAATCCTCTTGCAGTGCATGCCAGAAAATTTA
ATTATAGTTCAAAATCTATTGTTAAAAGTAAGGCAGATATAGAAAAATTGGGTATTAAAACTGTATTTATGTCCAATTCT
TTTGCTGCCTATCGCCGTTCCGTTTTTGAAGAGTTAAGTGGGTTTCCTGAACATACAATTCTTGCCGAGGATATGTTTAT
GGCGGCTAAGATGATTCAGGCGGGTTATAAGGTCGCCTACTGCGCTGAAGCGGTGGTAAGACACTCCCATAATTATACCC
CGCGAGAAGAGTTTCAACGATATTTTGATACTGGTGTATTTCATGCTTGTTCTCCGTGGATTCAGCGTGACTTTGGCGGA
GCCGGTGGTGAGGGTTTCCGCTTCGTAAAATCAGAGATTCAATTCCTGCTTAAAAATGCACCGTTCTGGATTCCAAGAGC
GTTATTAACAACTTTTGCTAAATTCCTGGGTTACAAATTAGGCAAGCATTGGCAATCTTTACCGTTGTCTACATGTCGCT
ATTTTAGCATGTACAAGAGTTATTGGAATAATATCCAGTATTCTTCGTCAAAAGAGATAAAATAA

Upstream 100 bases:

>100_bases
GTTGCCTGATGCAATTTCCCGATTTAACAACTATGTCGCACGGTATGACTTTGATAATATGAAGCAGATGGTTGGCAATT
GGTTGGCGGAATCAAAATAA

Downstream 100 bases:

>100_bases
ATGTCTGTTCTTCCCGTAATTATGGCTGGCGGCACAGGTAGCCGTTTATGGCCGCTTTCACGCGAATATCATCCGAAGCA
GTTTCTAAGCGTTGAAGGTA

Product: putative O antigen biosynthesis rhamnosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKITLIIPTYNAGSLWPNVLDAIKQQTIYPDKLIVIDSGSKDETVPLASDLKNISIFNIDSKDFNHGGTRNLAVAKTLDA
DVIIFLTQDAILADSDAIKNLVYYFSDPLIAAVCGRQLPHKDANPLAVHARKFNYSSKSIVKSKADIEKLGIKTVFMSNS
FAAYRRSVFEELSGFPEHTILAEDMFMAAKMIQAGYKVAYCAEAVVRHSHNYTPREEFQRYFDTGVFHACSPWIQRDFGG
AGGEGFRFVKSEIQFLLKNAPFWIPRALLTTFAKFLGYKLGKHWQSLPLSTCRYFSMYKSYWNNIQYSSSKEIK

Sequences:

>Translated_314_residues
MKITLIIPTYNAGSLWPNVLDAIKQQTIYPDKLIVIDSGSKDETVPLASDLKNISIFNIDSKDFNHGGTRNLAVAKTLDA
DVIIFLTQDAILADSDAIKNLVYYFSDPLIAAVCGRQLPHKDANPLAVHARKFNYSSKSIVKSKADIEKLGIKTVFMSNS
FAAYRRSVFEELSGFPEHTILAEDMFMAAKMIQAGYKVAYCAEAVVRHSHNYTPREEFQRYFDTGVFHACSPWIQRDFGG
AGGEGFRFVKSEIQFLLKNAPFWIPRALLTTFAKFLGYKLGKHWQSLPLSTCRYFSMYKSYWNNIQYSSSKEIK
>Mature_314_residues
MKITLIIPTYNAGSLWPNVLDAIKQQTIYPDKLIVIDSGSKDETVPLASDLKNISIFNIDSKDFNHGGTRNLAVAKTLDA
DVIIFLTQDAILADSDAIKNLVYYFSDPLIAAVCGRQLPHKDANPLAVHARKFNYSSKSIVKSKADIEKLGIKTVFMSNS
FAAYRRSVFEELSGFPEHTILAEDMFMAAKMIQAGYKVAYCAEAVVRHSHNYTPREEFQRYFDTGVFHACSPWIQRDFGG
AGGEGFRFVKSEIQFLLKNAPFWIPRALLTTFAKFLGYKLGKHWQSLPLSTCRYFSMYKSYWNNIQYSSSKEIK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 35523; Mature: 35523

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITLIIPTYNAGSLWPNVLDAIKQQTIYPDKLIVIDSGSKDETVPLASDLKNISIFNID
CEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCCCEEEECC
SKDFNHGGTRNLAVAKTLDADVIIFLTQDAILADSDAIKNLVYYFSDPLIAAVCGRQLPH
CCCCCCCCCCCEEEEEECCCCEEEEEECCCHHCCHHHHHHHHHHHCCHHHHHHHCCCCCC
KDANPLAVHARKFNYSSKSIVKSKADIEKLGIKTVFMSNSFAAYRRSVFEELSGFPEHTI
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCCCCHHH
LAEDMFMAAKMIQAGYKVAYCAEAVVRHSHNYTPREEFQRYFDTGVFHACSPWIQRDFGG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHCCHHHHHHCCC
AGGEGFRFVKSEIQFLLKNAPFWIPRALLTTFAKFLGYKLGKHWQSLPLSTCRYFSMYKS
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YWNNIQYSSSKEIK
HHCCCCCCCCCCCC
>Mature Secondary Structure
MKITLIIPTYNAGSLWPNVLDAIKQQTIYPDKLIVIDSGSKDETVPLASDLKNISIFNID
CEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCCCEEEECC
SKDFNHGGTRNLAVAKTLDADVIIFLTQDAILADSDAIKNLVYYFSDPLIAAVCGRQLPH
CCCCCCCCCCCEEEEEECCCCEEEEEECCCHHCCHHHHHHHHHHHCCHHHHHHHCCCCCC
KDANPLAVHARKFNYSSKSIVKSKADIEKLGIKTVFMSNSFAAYRRSVFEELSGFPEHTI
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCCCCHHH
LAEDMFMAAKMIQAGYKVAYCAEAVVRHSHNYTPREEFQRYFDTGVFHACSPWIQRDFGG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHCCHHHHHHCCC
AGGEGFRFVKSEIQFLLKNAPFWIPRALLTTFAKFLGYKLGKHWQSLPLSTCRYFSMYKS
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YWNNIQYSSSKEIK
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]