| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is cpsG [H]
Identifier: 194737286
GI number: 194737286
Start: 2208563
End: 2209933
Strand: Reverse
Name: cpsG [H]
Synonym: SeSA_A2337
Alternate gene names: 194737286
Gene position: 2209933-2208563 (Counterclockwise)
Preceding gene: 194736911
Following gene: 194738330
Centisome position: 46.93
GC content: 62.07
Gene sequence:
>1371_bases ATGACAAAATTAACCTGTTTCAAGGCCTACGACATTCGCGGCAGGCTGGGCGAAGAGCTCAATGAAGATATCGCGTGGCG GATTGGCCGCGCTTACGGCGAATATTTAAAACCGAAAACCATCGTGCTGGGCGGCGACGTGCGCCTGACCAGCGAGGCGC TGAAGCTGGCGCTGGCGAAAGGGTTACAGGACGCGGGCGTCGACGTGCTGGATATCGGTATGTCCGGCACCGAAGAGATT TACTTCGCCACCTTCCACCTCGGCGTGGACGGCGGTATTGAAGTGACCGCCAGCCATAACCCGATGGACTACAACGGTAT GAAGCTGGTGCGCGAGGGCGCCCGCCCGATAAGCGGCGACACCGGTCTGCGCGACGTTCAGCGTCTGGCGGAAGCGGGCG ATTTCCCGCCGGTGAACGACGCCGCGCGCGGCAGCTACAGACAAATCAGCCTGCGCGACGCCTACATCGACCACCTGCTC GCCTACATCAGTGTTAACAATCTCACCCCGCTGAAGCTGGTGGTGAATTCCGGCAACGGGGCGGCGGGGCCGGTCATTGA CGCCATCGAAGCGCGTCTGAAGGCGCTGGGCGCGCCGGTGGAGTTCATCAAAATCCACAACACCCCGGACGGCACCTTCC CGAACGGCATTCCCAACCCGTTGCTGCCGGAGTGTCGCGACGACACCCGCAAGGCCGTTATTGAACACGGGGCGGACATG GGCATCGCCTTTGACGGCGACTTCGACCGCTGCTTCCTGTTCGATGAGAAAGGGCAGTTTATCGAGGGGTACTACATCGT CGGGCTGCTGGCGGAAGCGTTTCTGGAAAAACACCCGGGGGCGAAGATTATCCACGACCCGCGCCTGACCTGGAACACGG AGGCAGTGGTGACGGCGGCGGGCGGGACGCCGGTGATGTCAAAAACCGGGCACGCCTTTATCAAGGAGCGGATGCGTACG GAGGATGCCATTTATGGCGGGGAAATGAGCGCGCATCACTATTTTCGTGATTTTGCCTACTGTGACAGCGGAATGATCCC GTGGCTGCTGGTGGCGGAGCTGGTGTGCCTGAAGGGACAGTCGCTGGGTGAACTGGTCCGCGACCGGATGGCGGCGTTCC CGGCGAGCGGGGAAATCAACAGCAGGCTGGCGGAGCCGGCAGCGGCCATCGCGCGGGTGGAAGCGCACTTCGCGGAAGAG GCGCAGGCGGTGGACCGCACGGACGGACTCAGCATGTCGTTCGCCGACTGGCGTTTCAACCTGCGCTCGTCGAACACCGA ACCGGTGGTGCGCCTGAATGTGGAATCACGCGGCGATATTCCGCTGATGGAAGCGCGAACACGCACTCTGCTGGCGCTGC TGAATCAGTAA
Upstream 100 bases:
>100_bases GGTGCCCGGTAAGCGCAACGCGCCATCCGGCAATGAACAACAATAACGATGTTGGCCATTTACGGTCAGGGCTAACTGTT GCCTGAAGAAGGGTAAGAAC
Downstream 100 bases:
>100_bases CGTCAGATCTCCCCTTACCGCCTGCGGGTAAGGGGCCAATCACAGGAACAACGATGACAAATCTAAAAAAGCGCGAACGA GCCAAAACCAATGCATCGTT
Product: phosphomannomutase
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MTKLTCFKAYDIRGRLGEELNEDIAWRIGRAYGEYLKPKTIVLGGDVRLTSEALKLALAKGLQDAGVDVLDIGMSGTEEI YFATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGDTGLRDVQRLAEAGDFPPVNDAARGSYRQISLRDAYIDHLL AYISVNNLTPLKLVVNSGNGAAGPVIDAIEARLKALGAPVEFIKIHNTPDGTFPNGIPNPLLPECRDDTRKAVIEHGADM GIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKHPGAKIIHDPRLTWNTEAVVTAAGGTPVMSKTGHAFIKERMRT EDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKGQSLGELVRDRMAAFPASGEINSRLAEPAAAIARVEAHFAEE AQAVDRTDGLSMSFADWRFNLRSSNTEPVVRLNVESRGDIPLMEARTRTLLALLNQ
Sequences:
>Translated_456_residues MTKLTCFKAYDIRGRLGEELNEDIAWRIGRAYGEYLKPKTIVLGGDVRLTSEALKLALAKGLQDAGVDVLDIGMSGTEEI YFATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGDTGLRDVQRLAEAGDFPPVNDAARGSYRQISLRDAYIDHLL AYISVNNLTPLKLVVNSGNGAAGPVIDAIEARLKALGAPVEFIKIHNTPDGTFPNGIPNPLLPECRDDTRKAVIEHGADM GIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKHPGAKIIHDPRLTWNTEAVVTAAGGTPVMSKTGHAFIKERMRT EDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKGQSLGELVRDRMAAFPASGEINSRLAEPAAAIARVEAHFAEE AQAVDRTDGLSMSFADWRFNLRSSNTEPVVRLNVESRGDIPLMEARTRTLLALLNQ >Mature_455_residues TKLTCFKAYDIRGRLGEELNEDIAWRIGRAYGEYLKPKTIVLGGDVRLTSEALKLALAKGLQDAGVDVLDIGMSGTEEIY FATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGDTGLRDVQRLAEAGDFPPVNDAARGSYRQISLRDAYIDHLLA YISVNNLTPLKLVVNSGNGAAGPVIDAIEARLKALGAPVEFIKIHNTPDGTFPNGIPNPLLPECRDDTRKAVIEHGADMG IAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKHPGAKIIHDPRLTWNTEAVVTAAGGTPVMSKTGHAFIKERMRTE DAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKGQSLGELVRDRMAAFPASGEINSRLAEPAAAIARVEAHFAEEA QAVDRTDGLSMSFADWRFNLRSSNTEPVVRLNVESRGDIPLMEARTRTLLALLNQ
Specific function: Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS O antigen [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1788361, Length=456, Percent_Identity=89.4736842105263, Blast_Score=860, Evalue=0.0, Organism=Escherichia coli, GI1789566, Length=466, Percent_Identity=27.0386266094421, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 49885; Mature: 49754
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLTCFKAYDIRGRLGEELNEDIAWRIGRAYGEYLKPKTIVLGGDVRLTSEALKLALAK CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEHHHHHHHHHHH GLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGD CHHHCCCCEEEECCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHCCCCCCCC TGLRDVQRLAEAGDFPPVNDAARGSYRQISLRDAYIDHLLAYISVNNLTPLKLVVNSGNG CCHHHHHHHHHCCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCC AAGPVIDAIEARLKALGAPVEFIKIHNTPDGTFPNGIPNPLLPECRDDTRKAVIEHGADM CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC GIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKHPGAKIIHDPRLTWNTEAVVTAA EEEECCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCEEECCCCEECCCEEEEEC GGTPVMSKTGHAFIKERMRTEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKGQ CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC SLGELVRDRMAAFPASGEINSRLAEPAAAIARVEAHFAEEAQAVDRTDGLSMSFADWRFN HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHEEEE LRSSNTEPVVRLNVESRGDIPLMEARTRTLLALLNQ ECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TKLTCFKAYDIRGRLGEELNEDIAWRIGRAYGEYLKPKTIVLGGDVRLTSEALKLALAK CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEHHHHHHHHHHH GLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGD CHHHCCCCEEEECCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHCCCCCCCC TGLRDVQRLAEAGDFPPVNDAARGSYRQISLRDAYIDHLLAYISVNNLTPLKLVVNSGNG CCHHHHHHHHHCCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCC AAGPVIDAIEARLKALGAPVEFIKIHNTPDGTFPNGIPNPLLPECRDDTRKAVIEHGADM CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC GIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKHPGAKIIHDPRLTWNTEAVVTAA EEEECCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCEEECCCCEECCCEEEEEC GGTPVMSKTGHAFIKERMRTEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKGQ CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC SLGELVRDRMAAFPASGEINSRLAEPAAAIARVEAHFAEEAQAVDRTDGLSMSFADWRFN HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHEEEE LRSSNTEPVVRLNVESRGDIPLMEARTRTLLALLNQ ECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1383393 [H]