Click here to switch to the map view.

The map label for this gene is ybjT [H]

Identifier: 194736876

GI number: 194736876

Start: 1018025

End: 1019458

Strand: Reverse

Name: ybjT [H]

Synonym: SeSA_A1050

Alternate gene names: 194736876

Gene position: 1019458-1018025 (Counterclockwise)

Preceding gene: 194737433

Following gene: 194737926

Centisome position: 21.65

GC content: 58.16

Gene sequence:

>1434_bases
GTGGCGCAACGCATTCTGGTTCTCGGCGCCAGCGGCTATATCGGCCAGCACCTGGTCTGTGCGCTAAGTCAGCAAGGGCA
TCAGGTGCGGGCGGCGGCGCGGCGCGTCGAACGTCTGGAAAAACAGCGCCTCGCCAACGTCAGTTGTCATAAGGTCGATC
TGCACTGGCCGGAAAATTTACCCGCGCTGCTTCGCGACATTGATACCGTTTACTATCTGGTACACGGCATGGGCGAAGGC
GGCGATTTTATCGCCCATGAGCGTCAGGCAGCGCTCAACGTGCGCGACGCGCTGCGCCAGACGCCGGTTAAGCAACTTAT
TTTCCTCAGTTCACTGCAGGCACCGGCGCATGAGCAATCCGATCACCTGCGCGCCCGCCAGCTTACGGCTGACACGCTGC
GCGACGCAGGCGTGCCGGTGACGGAATTACGCGCCGGGATCATCGTCGGCGCAGGCTCCGCCGCCTTCGAAGTCATGCGT
GACATGGTTTACAACCTGCCAATACTCACACCGCCGCGCTGGGTGCGTTCGCGCACCACGCCCATCGCCCTGGAAAATTT
ACTCTACTACCTGGTCGGCTTACTGGAGCACCCTGCGCGCGAGCATCGGATTCTGGAAGCCGCCGGGCCGCAGGTATTAA
GCTATCAGCAGCAGTTTGAACATTTTATGGCCGTCAGCGGTAAACGGCGTCCGCTAATCTCGGTTCCTTTTCCGACCCGC
TGGATTTCGGTCTGGTTTTTAAACGTCATTACCTCCGTGCCGCCGACTACCGCAAAAGCCTTAATCCAGGGGTTAAGGCA
CGATTTGCTGGCCGATGACGCCGCGTTAAAAAAGTTGATCCCCCAAACGCTTATCACCTTTGATGACGCCGTTCGCCGCA
CGCTGAAAGAAGAAGAAAAACTGGTGAACTCCAGCGACTGGGGCTACGACGCGCTGGCCTTCGCCCGCTGGCATCCCGAA
TACGGCTATTTTCCAAAGCAGGCGGGCTTTACCGCGCAGACCCCGGCCAGCCTATCGGCGCTCTGGCAGGTCGTAAATCG
GCTGGGTGGCAAAGAGGGCTATTTTTTCGGCAATATTTTGTGGCAGACGCGCGCCGCGATGGATCGTCTGGTGGGGCATA
AACTGGCGAAAGGCCGCCCGTCGCATACCTTGCTCAAGCCTGGCGATACGGTAGATAGCTGGAAAGTGATCATTGTCGAA
CCAGAAAAACAGCTCACGCTCTTGTTTGGCATGAAAGCGCCGGGTCTGGGGCGGCTTAGCTTCACGCTGCACGATAAAGG
TTGCTACCGCGAAATTGACGTGCGCGCCTGGTGGCATCCACACGGAATGCCGGGCCTGATTTACTGGCTACTGATGATCC
CGGCGCACCTGTTTATTTTCCGGGGAATGGCAAGGCGTATTGCCCGACTTGCAGAACAAATCACAGAAAAATGA

Upstream 100 bases:

>100_bases
CCGATTGTGCGTCTGGTGACGCATCTGGATGTCTCTCGCGAACAGCTTGCCGACGTCGTCGCCCACTGGCGCGCCTTTTT
AGCCCGCTAAGGAGAGCAAC

Downstream 100 bases:

>100_bases
GAAAAAGTTGCTGTATTCTTTCGTGTTTCCCATTGCATACCGACGTAATTCACGGAAGAATGCGCACGACGGTTTATTAA
ACACAGTGGATTGATATGAA

Product: NAD dependent epimerase/dehydratase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MAQRILVLGASGYIGQHLVCALSQQGHQVRAAARRVERLEKQRLANVSCHKVDLHWPENLPALLRDIDTVYYLVHGMGEG
GDFIAHERQAALNVRDALRQTPVKQLIFLSSLQAPAHEQSDHLRARQLTADTLRDAGVPVTELRAGIIVGAGSAAFEVMR
DMVYNLPILTPPRWVRSRTTPIALENLLYYLVGLLEHPAREHRILEAAGPQVLSYQQQFEHFMAVSGKRRPLISVPFPTR
WISVWFLNVITSVPPTTAKALIQGLRHDLLADDAALKKLIPQTLITFDDAVRRTLKEEEKLVNSSDWGYDALAFARWHPE
YGYFPKQAGFTAQTPASLSALWQVVNRLGGKEGYFFGNILWQTRAAMDRLVGHKLAKGRPSHTLLKPGDTVDSWKVIIVE
PEKQLTLLFGMKAPGLGRLSFTLHDKGCYREIDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMARRIARLAEQITEK

Sequences:

>Translated_477_residues
MAQRILVLGASGYIGQHLVCALSQQGHQVRAAARRVERLEKQRLANVSCHKVDLHWPENLPALLRDIDTVYYLVHGMGEG
GDFIAHERQAALNVRDALRQTPVKQLIFLSSLQAPAHEQSDHLRARQLTADTLRDAGVPVTELRAGIIVGAGSAAFEVMR
DMVYNLPILTPPRWVRSRTTPIALENLLYYLVGLLEHPAREHRILEAAGPQVLSYQQQFEHFMAVSGKRRPLISVPFPTR
WISVWFLNVITSVPPTTAKALIQGLRHDLLADDAALKKLIPQTLITFDDAVRRTLKEEEKLVNSSDWGYDALAFARWHPE
YGYFPKQAGFTAQTPASLSALWQVVNRLGGKEGYFFGNILWQTRAAMDRLVGHKLAKGRPSHTLLKPGDTVDSWKVIIVE
PEKQLTLLFGMKAPGLGRLSFTLHDKGCYREIDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMARRIARLAEQITEK
>Mature_476_residues
AQRILVLGASGYIGQHLVCALSQQGHQVRAAARRVERLEKQRLANVSCHKVDLHWPENLPALLRDIDTVYYLVHGMGEGG
DFIAHERQAALNVRDALRQTPVKQLIFLSSLQAPAHEQSDHLRARQLTADTLRDAGVPVTELRAGIIVGAGSAAFEVMRD
MVYNLPILTPPRWVRSRTTPIALENLLYYLVGLLEHPAREHRILEAAGPQVLSYQQQFEHFMAVSGKRRPLISVPFPTRW
ISVWFLNVITSVPPTTAKALIQGLRHDLLADDAALKKLIPQTLITFDDAVRRTLKEEEKLVNSSDWGYDALAFARWHPEY
GYFPKQAGFTAQTPASLSALWQVVNRLGGKEGYFFGNILWQTRAAMDRLVGHKLAKGRPSHTLLKPGDTVDSWKVIIVEP
EKQLTLLFGMKAPGLGRLSFTLHDKGCYREIDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMARRIARLAEQITEK

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=476, Percent_Identity=84.2436974789916, Blast_Score=827, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 53850; Mature: 53719

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRILVLGASGYIGQHLVCALSQQGHQVRAAARRVERLEKQRLANVSCHKVDLHWPENL
CCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
PALLRDIDTVYYLVHGMGEGGDFIAHERQAALNVRDALRQTPVKQLIFLSSLQAPAHEQS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHH
DHLRARQLTADTLRDAGVPVTELRAGIIVGAGSAAFEVMRDMVYNLPILTPPRWVRSRTT
HHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCCC
PIALENLLYYLVGLLEHPAREHRILEAAGPQVLSYQQQFEHFMAVSGKRRPLISVPFPTR
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCHH
WISVWFLNVITSVPPTTAKALIQGLRHDLLADDAALKKLIPQTLITFDDAVRRTLKEEEK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNSSDWGYDALAFARWHPEYGYFPKQAGFTAQTPASLSALWQVVNRLGGKEGYFFGNIL
HCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHH
WQTRAAMDRLVGHKLAKGRPSHTLLKPGDTVDSWKVIIVEPEKQLTLLFGMKAPGLGRLS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEE
FTLHDKGCYREIDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMARRIARLAEQITEK
EEEECCCCCEEECEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AQRILVLGASGYIGQHLVCALSQQGHQVRAAARRVERLEKQRLANVSCHKVDLHWPENL
CCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
PALLRDIDTVYYLVHGMGEGGDFIAHERQAALNVRDALRQTPVKQLIFLSSLQAPAHEQS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHH
DHLRARQLTADTLRDAGVPVTELRAGIIVGAGSAAFEVMRDMVYNLPILTPPRWVRSRTT
HHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCCC
PIALENLLYYLVGLLEHPAREHRILEAAGPQVLSYQQQFEHFMAVSGKRRPLISVPFPTR
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCHH
WISVWFLNVITSVPPTTAKALIQGLRHDLLADDAALKKLIPQTLITFDDAVRRTLKEEEK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNSSDWGYDALAFARWHPEYGYFPKQAGFTAQTPASLSALWQVVNRLGGKEGYFFGNIL
HCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHH
WQTRAAMDRLVGHKLAKGRPSHTLLKPGDTVDSWKVIIVEPEKQLTLLFGMKAPGLGRLS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEE
FTLHDKGCYREIDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMARRIARLAEQITEK
EEEECCCCCEEECEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]