| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yedK [H]
Identifier: 194736810
GI number: 194736810
Start: 691458
End: 692129
Strand: Reverse
Name: yedK [H]
Synonym: SeSA_A0715
Alternate gene names: 194736810
Gene position: 692129-691458 (Counterclockwise)
Preceding gene: 194736267
Following gene: 194737334
Centisome position: 14.7
GC content: 54.61
Gene sequence:
>672_bases ATGTGTGGACGCTTTGCACAATCACAGACCCGCGAAGAATACTTGGCTTATCTGGCCGATAAAGCCGATCGTAACATCGC ATACGATCCAGAGCCTATTGGTCGGTACAACGTGGCGCCCGGTACCAAAGTTCTGCTGCTCAGTGAACGCGACGAGCAAC TGCATCTGGATCCGGTGTTCTGGGGATTTGCGCCCGGATGGTGGGATAAACCACCGCTGATTAATGCACGGGTTGAGGCT GCGGCCACCAGCAGAATGTTTAAACCGCTATGGCAACATGGCCGAGCTATCGTGTTTGCTGATGGTTGGTTTGAGTGGAA GAAGGAAGGCGACAAGAAACAGCCATACTTCATCCACCGGGCTGACGGCCAGCCAATATTCATGGCGGCGATCGGCAGCA TACCGTTCGAACGCGGTGATGATGCCGAAGGATTCCTGATTATCACCGCTGCAGCCGATAAAGGTCTGGTAGACATTCAC GACCGCCGCCCTCTCGTTCTGTCACCTGAAGCAGCGCGGGAATGGATGCGGCAGGGCATAAGCGGGAAGGAGGTAGAGGA GATAATTACTGATGGTGCCGTGCCGACAGATAAATTTGCCTGGCACGCCGTGACGCGCGCCGTTGGCAATGCAAAAAATC AAGGGGAAGAGCTGATCAAACCCGTTACCTGA
Upstream 100 bases:
>100_bases CTGGGGAGTTATGGGGGAATTACCCCGACATAAGCTCTCCCGGAACAGCCATTCGCATATCCTCTTCTATACTTTCAGTC TGACCGACTGGAGGTTTCAT
Downstream 100 bases:
>100_bases CTACTGGCAGCTCGGAAAATCTGGTCGTATACCGAGGCGAAAGCATTTCTCGCTTCATAGCCCACTTCTGCGGTATCCCC TGCCCGGCGATTTTCTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MCGRFAQSQTREEYLAYLADKADRNIAYDPEPIGRYNVAPGTKVLLLSERDEQLHLDPVFWGFAPGWWDKPPLINARVEA AATSRMFKPLWQHGRAIVFADGWFEWKKEGDKKQPYFIHRADGQPIFMAAIGSIPFERGDDAEGFLIITAAADKGLVDIH DRRPLVLSPEAAREWMRQGISGKEVEEIITDGAVPTDKFAWHAVTRAVGNAKNQGEELIKPVT
Sequences:
>Translated_223_residues MCGRFAQSQTREEYLAYLADKADRNIAYDPEPIGRYNVAPGTKVLLLSERDEQLHLDPVFWGFAPGWWDKPPLINARVEA AATSRMFKPLWQHGRAIVFADGWFEWKKEGDKKQPYFIHRADGQPIFMAAIGSIPFERGDDAEGFLIITAAADKGLVDIH DRRPLVLSPEAAREWMRQGISGKEVEEIITDGAVPTDKFAWHAVTRAVGNAKNQGEELIKPVT >Mature_223_residues MCGRFAQSQTREEYLAYLADKADRNIAYDPEPIGRYNVAPGTKVLLLSERDEQLHLDPVFWGFAPGWWDKPPLINARVEA AATSRMFKPLWQHGRAIVFADGWFEWKKEGDKKQPYFIHRADGQPIFMAAIGSIPFERGDDAEGFLIITAAADKGLVDIH DRRPLVLSPEAAREWMRQGISGKEVEEIITDGAVPTDKFAWHAVTRAVGNAKNQGEELIKPVT
Specific function: Unknown
COG id: COG2135
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To yeast YMR114C [H]
Homologues:
Organism=Escherichia coli, GI48994894, Length=222, Percent_Identity=84.6846846846847, Blast_Score=398, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6323761, Length=197, Percent_Identity=33.502538071066, Blast_Score=92, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003738 [H]
Pfam domain/function: PF02586 DUF159 [H]
EC number: NA
Molecular weight: Translated: 25103; Mature: 25103
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGRFAQSQTREEYLAYLADKADRNIAYDPEPIGRYNVAPGTKVLLLSERDEQLHLDPVF CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEEECCCCEEEECEEE WGFAPGWWDKPPLINARVEAAATSRMFKPLWQHGRAIVFADGWFEWKKEGDKKQPYFIHR ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCCCCEEEEE ADGQPIFMAAIGSIPFERGDDAEGFLIITAAADKGLVDIHDRRPLVLSPEAAREWMRQGI CCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEECCHHHHHHHHCCC SGKEVEEIITDGAVPTDKFAWHAVTRAVGNAKNQGEELIKPVT CHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCC >Mature Secondary Structure MCGRFAQSQTREEYLAYLADKADRNIAYDPEPIGRYNVAPGTKVLLLSERDEQLHLDPVF CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEEECCCCEEEECEEE WGFAPGWWDKPPLINARVEAAATSRMFKPLWQHGRAIVFADGWFEWKKEGDKKQPYFIHR ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCCCCEEEEE ADGQPIFMAAIGSIPFERGDDAEGFLIITAAADKGLVDIHDRRPLVLSPEAAREWMRQGI CCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEECCHHHHHHHHCCC SGKEVEEIITDGAVPTDKFAWHAVTRAVGNAKNQGEELIKPVT CHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8371104; 9278503 [H]