| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is pldB [H]
Identifier: 194736470
GI number: 194736470
Start: 4044250
End: 4045266
Strand: Direct
Name: pldB [H]
Synonym: SeSA_A4169
Alternate gene names: 194736470
Gene position: 4044250-4045266 (Clockwise)
Preceding gene: 194735958
Following gene: 194738289
Centisome position: 85.88
GC content: 54.47
Gene sequence:
>1017_bases ATGTTTCAGCAGCAAAATGACTGGGAAACAAGAGAAAATGCGTTTGCCGCTTTTGCTATGGGGCCGCTGACCGATTTCTG GCGTCAGCGGGAAGAGGCGGAGTTTATCGGCGTGGGTAACATTCCGGTGCGCTTTGTCCGTTTTCGGAATGATTCTAACG ATCGGACGATCGTCATTTGTCCTGGCCGCATTGAGAGTTATGTAAAATACGCTGAACTGGCGTATGACCTTTTTCATCTC GGTTTTGATATCTTCATCATCGACCACCGTGGTCAAGGGCGCTCCGGGCGGATGTTATCGGACCCGCATCGGGGTCACGT TGATCATTTTAACGATTATGTTGAGGACTTAGCGGCGTTCTGGCAGCAGGAAATTGAGCCGGGGCCGTGGCGTAAGCGTT ATATCCTGGCGCACTCAATGGGGGGCGCGATAGCCACCCTGTTCCTGCAACGCCATCGTGTGCGGTGCGACGCTATTGCG CTCACTGCGCCGATGTTTGGTATTGTGATACGCTTGCCTTCCTTTATGGTGCGCCATATTCTCGACTGGGCCGAAGGGCA TCAGCGTATCCGTGAAGATTACGCTATTGGTACCGGTCAGTGGCGGGCGTTGCCGTTTGGGATGAATGCGCTGACCCACA GCCGCCAGCGTTATCAGCGCAACTTACGATTTTATGCCGACGAGCCGCAGCTGCGCGTTGGCGGCCCCACCTGGCATTGG GTACGCGAAGGCATTCTGGCGGGTGAGCAGGTACTGGCTGGGGCGAGCGATGACACGACGCCTACGCTACTGATTCAGGC GGAAGAAGAGCGGGTAGTGGATAACCGCACCCACGATCGTTTTTGTGAAATTCGCGCCGCGGCGGGATACCCTTGTGAAG GGGGAAAACCGCTGGTTATCAAAGGCGCGTACCATGAGATCCTTTTTGAAAAGGACGCCATGCGCTCAGTCGCGCTTAAC GCCATTGTTGAATTTTTCAACAAGCCTAATTTATCCAGCGGAAATCGCTTTGCTTAG
Upstream 100 bases:
>100_bases CTGGTTGTCTGTTTTTGTGCCACAATACGCTACTGCCGCTGTGTTGTGTCAGGCACGACGCAAAAAACGATTTTACCTGG TAAACGAGGCCGAAAACCCG
Downstream 100 bases:
>100_bases AGGTTAAATTTTATTATGTATCAGGTTGTTGCGTCTGATTTAGATGGCACGCTGCTCTCCCCCGACCATACGTTGTCCCC TTATGCCAAAGAGACTCTGA
Product: lysophospholipase L2
Products: NA
Alternate protein names: Lecithinase B [H]
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MFQQQNDWETRENAFAAFAMGPLTDFWRQREEAEFIGVGNIPVRFVRFRNDSNDRTIVICPGRIESYVKYAELAYDLFHL GFDIFIIDHRGQGRSGRMLSDPHRGHVDHFNDYVEDLAAFWQQEIEPGPWRKRYILAHSMGGAIATLFLQRHRVRCDAIA LTAPMFGIVIRLPSFMVRHILDWAEGHQRIREDYAIGTGQWRALPFGMNALTHSRQRYQRNLRFYADEPQLRVGGPTWHW VREGILAGEQVLAGASDDTTPTLLIQAEEERVVDNRTHDRFCEIRAAAGYPCEGGKPLVIKGAYHEILFEKDAMRSVALN AIVEFFNKPNLSSGNRFA
Sequences:
>Translated_338_residues MFQQQNDWETRENAFAAFAMGPLTDFWRQREEAEFIGVGNIPVRFVRFRNDSNDRTIVICPGRIESYVKYAELAYDLFHL GFDIFIIDHRGQGRSGRMLSDPHRGHVDHFNDYVEDLAAFWQQEIEPGPWRKRYILAHSMGGAIATLFLQRHRVRCDAIA LTAPMFGIVIRLPSFMVRHILDWAEGHQRIREDYAIGTGQWRALPFGMNALTHSRQRYQRNLRFYADEPQLRVGGPTWHW VREGILAGEQVLAGASDDTTPTLLIQAEEERVVDNRTHDRFCEIRAAAGYPCEGGKPLVIKGAYHEILFEKDAMRSVALN AIVEFFNKPNLSSGNRFA >Mature_338_residues MFQQQNDWETRENAFAAFAMGPLTDFWRQREEAEFIGVGNIPVRFVRFRNDSNDRTIVICPGRIESYVKYAELAYDLFHL GFDIFIIDHRGQGRSGRMLSDPHRGHVDHFNDYVEDLAAFWQQEIEPGPWRKRYILAHSMGGAIATLFLQRHRVRCDAIA LTAPMFGIVIRLPSFMVRHILDWAEGHQRIREDYAIGTGQWRALPFGMNALTHSRQRYQRNLRFYADEPQLRVGGPTWHW VREGILAGEQVLAGASDDTTPTLLIQAEEERVVDNRTHDRFCEIRAAAGYPCEGGKPLVIKGAYHEILFEKDAMRSVALN AIVEFFNKPNLSSGNRFA
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cell inner membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994980, Length=336, Percent_Identity=82.1428571428571, Blast_Score=587, Evalue=1e-169,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.5 [H]
Molecular weight: Translated: 38925; Mature: 38925
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQQQNDWETRENAFAAFAMGPLTDFWRQREEAEFIGVGNIPVRFVRFRNDSNDRTIVIC CCCCCCCCCHHHHHEEEHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCCCEEEEE PGRIESYVKYAELAYDLFHLGFDIFIIDHRGQGRSGRMLSDPHRGHVDHFNDYVEDLAAF CHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH WQQEIEPGPWRKRYILAHSMGGAIATLFLQRHRVRCDAIALTAPMFGIVIRLPSFMVRHI HHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH LDWAEGHQRIREDYAIGTGQWRALPFGMNALTHSRQRYQRNLRFYADEPQLRVGGPTWHW HHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEECCCCEEECCCHHHH VREGILAGEQVLAGASDDTTPTLLIQAEEERVVDNRTHDRFCEIRAAAGYPCEGGKPLVI HHHHHHCCHHHCCCCCCCCCCEEEEEECHHHHHCCCCHHHHHEEEECCCCCCCCCCEEEE KGAYHEILFEKDAMRSVALNAIVEFFNKPNLSSGNRFA ECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MFQQQNDWETRENAFAAFAMGPLTDFWRQREEAEFIGVGNIPVRFVRFRNDSNDRTIVIC CCCCCCCCCHHHHHEEEHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCCCEEEEE PGRIESYVKYAELAYDLFHLGFDIFIIDHRGQGRSGRMLSDPHRGHVDHFNDYVEDLAAF CHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH WQQEIEPGPWRKRYILAHSMGGAIATLFLQRHRVRCDAIALTAPMFGIVIRLPSFMVRHI HHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH LDWAEGHQRIREDYAIGTGQWRALPFGMNALTHSRQRYQRNLRFYADEPQLRVGGPTWHW HHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEECCCCEEECCCHHHH VREGILAGEQVLAGASDDTTPTLLIQAEEERVVDNRTHDRFCEIRAAAGYPCEGGKPLVI HHHHHHCCHHHCCCCCCCCCCEEEEEECHHHHHCCCCHHHHHEEEECCCCCCCCCCEEEE KGAYHEILFEKDAMRSVALNAIVEFFNKPNLSSGNRFA ECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]