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The map label for this gene is clpE [H]

Identifier: 194736277

GI number: 194736277

Start: 4458133

End: 4458930

Strand: Direct

Name: clpE [H]

Synonym: SeSA_A4580

Alternate gene names: 194736277

Gene position: 4458133-4458930 (Clockwise)

Preceding gene: 194733941

Following gene: 194736758

Centisome position: 94.67

GC content: 56.27

Gene sequence:

>798_bases
ATGACGATGAAACAGACCCAGAAAATGCGTTCTTTTTTCCGTAACAGAGTGACGAAGGCGCTGGGAATGACCCTGGCCCT
GATGATGGCGAGCCAGAGTGTGCTGGCTTCCCTAGCGGCGGACCAGACCCGCTATATTTTTCGCGGCGACAAGGACGCGC
TGACCATCACGGTGACCAACAATGACAAGGAGCGTACTTTCGGCGGCCAGGCGTGGGTGGACAATATTGTGGAGAAAGAC
ACCCGCCCGACGTTTGTGGTGACGCCCTCCTTCTTTAAGGTGAAACCGCAGGGGCAGCAGACGCTGCGTATCATCATGGC
CTCTGACCACCTGCCGAAGGATAAAGAGTCAGTGTACTGGCTGAACCTGCAGGATATTCCGCCGGCGCTGAAGGGCAGCG
GAATTGCCATTGCCCTGCGCACGAAGCTGAAGCTGTTCTACCGCCCGGAGGCGCTGCTGAAGGACCGTAAAGGCGCCGAG
GAAGGCATCAGCCTGCAGGTCCGTCCGGACGGGCGGACGATGCTGGTCAACACCACGCCGTATATCTACGCCATCGGCAG
CCTGCTGGATGCGAACGGTAAAAAAGTTGCGGTGGACAACGACACGGCTCAGAAACTGCTGATGTTTATGCCGGGGGATG
AGGTGCAGGTGAAGGGGAATGTGGTGAAGGTGGATTCCCTGAACGATTACGGCGAGCTGCAGACCTGGACCATCAACCAG
AAAAAAACGGCGACTTCTCCCAGGCAGAAGACATCTGATACGGCGGTTAATTCGTCTGATAAAGCAGGTAAAAAATAA

Upstream 100 bases:

>100_bases
GGCGATATCACGCTGGGACAGTGCCGGATACCTGCGGCGAAACTGCAGGAGACGGCGAAACTACAGGAAATTACGTGCGA
ATAAGCATAACCGGACAATG

Downstream 100 bases:

>100_bases
CCCTTTCCGGTCCTGCGGAATAAAGAGAAACCATGATGAAAAAAGCACTGATGGCGGTGGCCCTCTTCAGCGCCCTGCCG
GTCCTGGCGGCGGATTACAG

Product: chaperone protein ClpE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MTMKQTQKMRSFFRNRVTKALGMTLALMMASQSVLASLAADQTRYIFRGDKDALTITVTNNDKERTFGGQAWVDNIVEKD
TRPTFVVTPSFFKVKPQGQQTLRIIMASDHLPKDKESVYWLNLQDIPPALKGSGIAIALRTKLKLFYRPEALLKDRKGAE
EGISLQVRPDGRTMLVNTTPYIYAIGSLLDANGKKVAVDNDTAQKLLMFMPGDEVQVKGNVVKVDSLNDYGELQTWTINQ
KKTATSPRQKTSDTAVNSSDKAGKK

Sequences:

>Translated_265_residues
MTMKQTQKMRSFFRNRVTKALGMTLALMMASQSVLASLAADQTRYIFRGDKDALTITVTNNDKERTFGGQAWVDNIVEKD
TRPTFVVTPSFFKVKPQGQQTLRIIMASDHLPKDKESVYWLNLQDIPPALKGSGIAIALRTKLKLFYRPEALLKDRKGAE
EGISLQVRPDGRTMLVNTTPYIYAIGSLLDANGKKVAVDNDTAQKLLMFMPGDEVQVKGNVVKVDSLNDYGELQTWTINQ
KKTATSPRQKTSDTAVNSSDKAGKK
>Mature_264_residues
TMKQTQKMRSFFRNRVTKALGMTLALMMASQSVLASLAADQTRYIFRGDKDALTITVTNNDKERTFGGQAWVDNIVEKDT
RPTFVVTPSFFKVKPQGQQTLRIIMASDHLPKDKESVYWLNLQDIPPALKGSGIAIALRTKLKLFYRPEALLKDRKGAEE
GISLQVRPDGRTMLVNTTPYIYAIGSLLDANGKKVAVDNDTAQKLLMFMPGDEVQVKGNVVKVDSLNDYGELQTWTINQK
KTATSPRQKTSDTAVNSSDKAGKK

Specific function: Involved in the biogenesis of the CS31A capsule-like antigen [H]

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1790771, Length=222, Percent_Identity=31.981981981982, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789532, Length=218, Percent_Identity=28.4403669724771, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1786333, Length=248, Percent_Identity=29.4354838709677, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786936, Length=230, Percent_Identity=26.5217391304348, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI87082203, Length=227, Percent_Identity=26.431718061674, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786743, Length=219, Percent_Identity=27.3972602739726, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788677, Length=166, Percent_Identity=32.5301204819277, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787171, Length=222, Percent_Identity=26.1261261261261, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87081806, Length=240, Percent_Identity=26.25, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 29523; Mature: 29392

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMKQTQKMRSFFRNRVTKALGMTLALMMASQSVLASLAADQTRYIFRGDKDALTITVTN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEC
NDKERTFGGQAWVDNIVEKDTRPTFVVTPSFFKVKPQGQQTLRIIMASDHLPKDKESVYW
CCCCCCCCCHHHHHHHHHCCCCCEEEECCCEEEECCCCCCEEEEEEECCCCCCCCCCEEE
LNLQDIPPALKGSGIAIALRTKLKLFYRPEALLKDRKGAEEGISLQVRPDGRTMLVNTTP
EEECCCCCCCCCCCEEEEEEEEEEEEECCHHHHHCCCCCCCCCEEEECCCCCEEEEECCC
YIYAIGSLLDANGKKVAVDNDTAQKLLMFMPGDEVQVKGNVVKVDSLNDYGELQTWTINQ
CEEEEEHHHCCCCCEEEECCHHHHEEEEECCCCCEEEECCEEEEECCCCCCCEEEEEECC
KKTATSPRQKTSDTAVNSSDKAGKK
CCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TMKQTQKMRSFFRNRVTKALGMTLALMMASQSVLASLAADQTRYIFRGDKDALTITVTN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEC
NDKERTFGGQAWVDNIVEKDTRPTFVVTPSFFKVKPQGQQTLRIIMASDHLPKDKESVYW
CCCCCCCCCHHHHHHHHHCCCCCEEEECCCEEEECCCCCCEEEEEEECCCCCCCCCCEEE
LNLQDIPPALKGSGIAIALRTKLKLFYRPEALLKDRKGAEEGISLQVRPDGRTMLVNTTP
EEECCCCCCCCCCCEEEEEEEEEEEEECCHHHHHCCCCCCCCCEEEECCCCCEEEEECCC
YIYAIGSLLDANGKKVAVDNDTAQKLLMFMPGDEVQVKGNVVKVDSLNDYGELQTWTINQ
CEEEEEHHHCCCCCEEEECCHHHHEEEEECCCCCEEEECCEEEEECCCCCCCEEEEEECC
KKTATSPRQKTSDTAVNSSDKAGKK
CCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8097176 [H]