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The map label for this gene is 194736246

Identifier: 194736246

GI number: 194736246

Start: 307730

End: 308725

Strand: Reverse

Name: 194736246

Synonym: SeSA_A0297

Alternate gene names: NA

Gene position: 308725-307730 (Counterclockwise)

Preceding gene: 194736842

Following gene: 194736484

Centisome position: 6.56

GC content: 59.94

Gene sequence:

>996_bases
ATGACCGGCGCTCTCGACCAGGCGCAGAAAACCCCATGGCGTTACGGATTCCTGAACCTGATGCGGCGCGTGGATGCCCA
GCTCTGTGATACTCCGGCAGGCAGTATCTGGCAGCCACGGATGGAAAAATTCCGTCTGGGACAGACGCCGACGATGACCT
TTGCGCCACGGGAAATCGCCCAGGTCAGCTGGCTGGATGGACGCCTGCACCTGAGCCTGTACAGCCTCGGACTGTGGGGG
CCAAACGGCCCGTTGCCGCTGCACTATACCGAGCTGGCGCTAAATCGCTCAGAGAGCCGTCACGATCCGACGCTGGTTCA
TTTTTCCAATATTTTTCACCACCGCTGGCTGACGCAGTTCTGGCAGGCATGGCGCAGCGGCCAGTCCGCTGGTGGCGGGC
TGGACAAACCGGAACACGACCGTTTTGCGTTTTATATCGCCAGTCTCAGCGGGCAGGATCTACGGGAAAGCGCCGAAAGC
CCGCTGTCAGATCATGTTCGCCTGGCAGCCTCCGCTCATCTGGTACGCGAATCGCGCAATCCTGACGGGCTGGCCGCCAC
GCTGGCGCACTATTTCAGCGTACCTTTTGCGGTGAAAGAGTTCGCCCTGCACTGGATAACGGTGGCGAACGATGAAATCA
CCCGTCTGGGCACGCCCGCGCAGTCTTCGGTGCTGGGCAACGGGGCGCTTATCGGCCAGGCCGTACCGGATATGCAGTAC
AAATTCCGGCTAATTATCGGCCCGCTCACGCTGGAGGATTACCTGCGTTTTCTGCCCGGCGGCAACAATTTGCCCGTGCT
GACAGAACTGGTGCGTACGTTCATCGGTTTTGAACATTGCTGGGAGATTGAACTGCAGTTAAAGCCTCATGCCGCACCGC
CTGCGGTGATCGGCGGCGCGCAGCAGCTTGGCTGGACGGCCTGGGCAGGTAAAGCCATGCATGACCGTCCGGTGACCGGC
ATGATTTTTGAACCTGAACACGGCTTAACCCACTGA

Upstream 100 bases:

>100_bases
GCCATGTTTCCATTAATACCTTCTCACAGATGACGCTGCACTCGATGCAACGCGGGCATGTCATGACCTGGCCGGTAAGA
ACCGGGCAACGGGGGAGCGT

Downstream 100 bases:

>100_bases
GAGTAATGATATGGACATGTCCCTGACTAAACCGGTAAGCGCGGAACAACCCTGCGGCCCCGATCCGGAGTACGATCCGG
AGTACCTGCTGCTGTTCAGC

Product: type VI secretion protein, family protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein ImpH; Type VI Secretion System Protein; Type VI Secretion Protein VasG; T6ss R; Type VI Secretion System Core Protein; Type VI Secretion System Protein EvpG; Periplasmic Chaperone Of Fimbral Assembly Machinery; Conserved Protein; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MTGALDQAQKTPWRYGFLNLMRRVDAQLCDTPAGSIWQPRMEKFRLGQTPTMTFAPREIAQVSWLDGRLHLSLYSLGLWG
PNGPLPLHYTELALNRSESRHDPTLVHFSNIFHHRWLTQFWQAWRSGQSAGGGLDKPEHDRFAFYIASLSGQDLRESAES
PLSDHVRLAASAHLVRESRNPDGLAATLAHYFSVPFAVKEFALHWITVANDEITRLGTPAQSSVLGNGALIGQAVPDMQY
KFRLIIGPLTLEDYLRFLPGGNNLPVLTELVRTFIGFEHCWEIELQLKPHAAPPAVIGGAQQLGWTAWAGKAMHDRPVTG
MIFEPEHGLTH

Sequences:

>Translated_331_residues
MTGALDQAQKTPWRYGFLNLMRRVDAQLCDTPAGSIWQPRMEKFRLGQTPTMTFAPREIAQVSWLDGRLHLSLYSLGLWG
PNGPLPLHYTELALNRSESRHDPTLVHFSNIFHHRWLTQFWQAWRSGQSAGGGLDKPEHDRFAFYIASLSGQDLRESAES
PLSDHVRLAASAHLVRESRNPDGLAATLAHYFSVPFAVKEFALHWITVANDEITRLGTPAQSSVLGNGALIGQAVPDMQY
KFRLIIGPLTLEDYLRFLPGGNNLPVLTELVRTFIGFEHCWEIELQLKPHAAPPAVIGGAQQLGWTAWAGKAMHDRPVTG
MIFEPEHGLTH
>Mature_330_residues
TGALDQAQKTPWRYGFLNLMRRVDAQLCDTPAGSIWQPRMEKFRLGQTPTMTFAPREIAQVSWLDGRLHLSLYSLGLWGP
NGPLPLHYTELALNRSESRHDPTLVHFSNIFHHRWLTQFWQAWRSGQSAGGGLDKPEHDRFAFYIASLSGQDLRESAESP
LSDHVRLAASAHLVRESRNPDGLAATLAHYFSVPFAVKEFALHWITVANDEITRLGTPAQSSVLGNGALIGQAVPDMQYK
FRLIIGPLTLEDYLRFLPGGNNLPVLTELVRTFIGFEHCWEIELQLKPHAAPPAVIGGAQQLGWTAWAGKAMHDRPVTGM
IFEPEHGLTH

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37052; Mature: 36920

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGALDQAQKTPWRYGFLNLMRRVDAQLCDTPAGSIWQPRMEKFRLGQTPTMTFAPREIA
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEECHHHHH
QVSWLDGRLHLSLYSLGLWGPNGPLPLHYTELALNRSESRHDPTLVHFSNIFHHRWLTQF
HHEECCCEEEEEEEEEEEECCCCCCCEEHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH
WQAWRSGQSAGGGLDKPEHDRFAFYIASLSGQDLRESAESPLSDHVRLAASAHLVRESRN
HHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDGLAATLAHYFSVPFAVKEFALHWITVANDEITRLGTPAQSSVLGNGALIGQAVPDMQY
CCHHHHHHHHHHCCCHHHHHHHHEEEEECCCCHHHCCCCHHHHHCCCCEEECCCCCCCCE
KFRLIIGPLTLEDYLRFLPGGNNLPVLTELVRTFIGFEHCWEIELQLKPHAAPPAVIGGA
EEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHCCCH
QQLGWTAWAGKAMHDRPVTGMIFEPEHGLTH
HHHCCHHHCCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
TGALDQAQKTPWRYGFLNLMRRVDAQLCDTPAGSIWQPRMEKFRLGQTPTMTFAPREIA
CCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEECHHHHH
QVSWLDGRLHLSLYSLGLWGPNGPLPLHYTELALNRSESRHDPTLVHFSNIFHHRWLTQF
HHEECCCEEEEEEEEEEEECCCCCCCEEHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH
WQAWRSGQSAGGGLDKPEHDRFAFYIASLSGQDLRESAESPLSDHVRLAASAHLVRESRN
HHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDGLAATLAHYFSVPFAVKEFALHWITVANDEITRLGTPAQSSVLGNGALIGQAVPDMQY
CCHHHHHHHHHHCCCHHHHHHHHEEEEECCCCHHHCCCCHHHHHCCCCEEECCCCCCCCE
KFRLIIGPLTLEDYLRFLPGGNNLPVLTELVRTFIGFEHCWEIELQLKPHAAPPAVIGGA
EEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHCCCH
QQLGWTAWAGKAMHDRPVTGMIFEPEHGLTH
HHHCCHHHCCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA