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The map label for this gene is vasA

Identifier: 194736842

GI number: 194736842

Start: 308722

End: 310605

Strand: Reverse

Name: vasA

Synonym: SeSA_A0298

Alternate gene names: NA

Gene position: 310605-308722 (Counterclockwise)

Preceding gene: 194737470

Following gene: 194736246

Centisome position: 6.6

GC content: 59.18

Gene sequence:

>1884_bases
ATGGATCCACGGCTACTGGAGTATTACAACCGCGAACTGAGCTACCTGCGGGAGACTGGTGCTGAGTTCGCCACCCTCCA
TCCCAAAATTGCCGCCCGACTGGGGATGCAGGGAACCGATATTGCCGACCCGTATGTGGAACGCATGATCGAGGCGTTCA
GCTTTCTGAGCGCCCGTACTCAGCTAAAAATTGACGCCGAGTTTCCCCGCTTCACACAGCGGTTACTGGAAGTCGTCAGC
CCCAATTACGTCACCCCCACGCCATCGATGGCAGTGGTAAAGCTGTATCCCGATACGCAGGAAGGCGACCTGGCGAAAGG
GGTCACCGTGCCGCGCGATACCGCGTTCGTTTCCCCTATCCCGGAAGGCGAAAATACCGCCTGCCAGTTTCGCAGCAGCC
AGGACGTCACGCTGTGGCCGCTGTCCATCGAGGAGGTACGCCTGACCGCCGCGCCACCGGATATGCCCGCCCTGCACCGC
TATCTGCCGCCTAATATTCATGTCGCCGGGGCATTGCGCATCACCCTGCGAACCTTCGGGGAACTGACTTTCAGCGAGCT
GGCCGGTCCGGCACGGCTGCCCTTTTACCTCTGCGGCGAAGAACGCATTGCGTCACACCTGTTTGAGCTGCTGCATACCA
GCGCCGTCGCCACACTGGCCGGTGAACCCGGTCACTTTGACGGCGAACTGAATGTGAATCTTCAACACCCGGTGGCGCAC
GAAGGGCTGGAGCCAGGGCAGGGGCTGCTGCCGCTCGCCTGGAACGTGTTTCACGGCCATAATCTGCTGCATGAATTTTT
CGCCTGTCCGGAACGGTTTTACTTCTTCACCCCGACCGGATTGTCTGCCGGGTTACAAAAGGTGCAGGGCAATGTGGCGG
AAATTGTCATACTGCTTAATCGCCTGCCGCCGGACTGGCTGATTCATCAGACGGACGCTGCACAGTTCAGCCTGTTCTGT
ACGCCGGTGATCAACCTGTTTCCCCGCACCACCACCCGGATTGAAGTCACTCACAGCGTGACGGAACAGCATCTGGTGGT
AGATCGTACCCGTCCGCTGGATTACGAGGTGTTTTCTGTTCAGGAAGTCGAAGGCCTGGAAGCGGAAACCACACGGAAGA
TGATTTTTCGTCCGCTGTATCACACCCGTAATAATGACGAAGGCAACCACGGGCGTTATTTTTCACTGCGTCGTGAACCG
CGCCGCTCGTCAGAAAATGCCCGCCGCTATGGCACCCGAACCCCCTATACCGGCTCGGAAATCTTCCTGTCGCTGGTTGA
TCAGCATGAAGCGCCCTACCCGGAAAATCTGCGCCATATCACCGTCACGGCAATGGTGACTAACCGCGATCTGCCCTGTC
TTATTCCACGTAATGGCCGGGATGATCTGACCGTAGATGCGGCGATCCCGGTGGCGGGCGTGGGTCTTATCAGACCGCCG
CGCCCGCCGCAGCCGCCGCTGGCTGAACGCGAAATGGCCTGGCGGCTGATCCGGCAGTTGTCGTTTAATTATCTGCCGCT
GGCCGATCTGGATCACCGCACCGGCGGCCAGGCGCTGCGCGATCTGCTGAATCTGTTTATTCCGGCTCACGACAGCCCGC
AGTCGCGCCAGGTGCGCAGCCTGATTGGCTGCAAAACCACCCCAGTAACCCGCCGCCTGCCCGGCTCCGGTCTGTTGGTC
TATGGCCGGGGCGTCAGTTGCGAACTGACCGTGGACGAAGAAGGATTTTCCGGTATCAGTCCTTACCTGTTCGGTCTGGT
GCTGGAACACTATATTGCCCGCCATGTTTCCATTAATACCTTCTCACAGATGACGCTGCACTCGATGCAACGCGGGCATG
TCATGACCTGGCCGGTAAGAACCGGGCAACGGGGGAGCGTATGA

Upstream 100 bases:

>100_bases
ACAAATTCTGACGCAGCCGTATCCCACGGAGTTTCTGGTACGCAGCGCGCTGGATATGGAGCTGAGCCGCATTACGTTCT
TTTAATACAGGGCATTATTC

Downstream 100 bases:

>100_bases
CCGGCGCTCTCGACCAGGCGCAGAAAACCCCATGGCGTTACGGATTCCTGAACCTGATGCGGCGCGTGGATGCCCAGCTC
TGTGATACTCCGGCAGGCAG

Product: type VI secretion protein, family protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 627; Mature: 627

Protein sequence:

>627_residues
MDPRLLEYYNRELSYLRETGAEFATLHPKIAARLGMQGTDIADPYVERMIEAFSFLSARTQLKIDAEFPRFTQRLLEVVS
PNYVTPTPSMAVVKLYPDTQEGDLAKGVTVPRDTAFVSPIPEGENTACQFRSSQDVTLWPLSIEEVRLTAAPPDMPALHR
YLPPNIHVAGALRITLRTFGELTFSELAGPARLPFYLCGEERIASHLFELLHTSAVATLAGEPGHFDGELNVNLQHPVAH
EGLEPGQGLLPLAWNVFHGHNLLHEFFACPERFYFFTPTGLSAGLQKVQGNVAEIVILLNRLPPDWLIHQTDAAQFSLFC
TPVINLFPRTTTRIEVTHSVTEQHLVVDRTRPLDYEVFSVQEVEGLEAETTRKMIFRPLYHTRNNDEGNHGRYFSLRREP
RRSSENARRYGTRTPYTGSEIFLSLVDQHEAPYPENLRHITVTAMVTNRDLPCLIPRNGRDDLTVDAAIPVAGVGLIRPP
RPPQPPLAEREMAWRLIRQLSFNYLPLADLDHRTGGQALRDLLNLFIPAHDSPQSRQVRSLIGCKTTPVTRRLPGSGLLV
YGRGVSCELTVDEEGFSGISPYLFGLVLEHYIARHVSINTFSQMTLHSMQRGHVMTWPVRTGQRGSV

Sequences:

>Translated_627_residues
MDPRLLEYYNRELSYLRETGAEFATLHPKIAARLGMQGTDIADPYVERMIEAFSFLSARTQLKIDAEFPRFTQRLLEVVS
PNYVTPTPSMAVVKLYPDTQEGDLAKGVTVPRDTAFVSPIPEGENTACQFRSSQDVTLWPLSIEEVRLTAAPPDMPALHR
YLPPNIHVAGALRITLRTFGELTFSELAGPARLPFYLCGEERIASHLFELLHTSAVATLAGEPGHFDGELNVNLQHPVAH
EGLEPGQGLLPLAWNVFHGHNLLHEFFACPERFYFFTPTGLSAGLQKVQGNVAEIVILLNRLPPDWLIHQTDAAQFSLFC
TPVINLFPRTTTRIEVTHSVTEQHLVVDRTRPLDYEVFSVQEVEGLEAETTRKMIFRPLYHTRNNDEGNHGRYFSLRREP
RRSSENARRYGTRTPYTGSEIFLSLVDQHEAPYPENLRHITVTAMVTNRDLPCLIPRNGRDDLTVDAAIPVAGVGLIRPP
RPPQPPLAEREMAWRLIRQLSFNYLPLADLDHRTGGQALRDLLNLFIPAHDSPQSRQVRSLIGCKTTPVTRRLPGSGLLV
YGRGVSCELTVDEEGFSGISPYLFGLVLEHYIARHVSINTFSQMTLHSMQRGHVMTWPVRTGQRGSV
>Mature_627_residues
MDPRLLEYYNRELSYLRETGAEFATLHPKIAARLGMQGTDIADPYVERMIEAFSFLSARTQLKIDAEFPRFTQRLLEVVS
PNYVTPTPSMAVVKLYPDTQEGDLAKGVTVPRDTAFVSPIPEGENTACQFRSSQDVTLWPLSIEEVRLTAAPPDMPALHR
YLPPNIHVAGALRITLRTFGELTFSELAGPARLPFYLCGEERIASHLFELLHTSAVATLAGEPGHFDGELNVNLQHPVAH
EGLEPGQGLLPLAWNVFHGHNLLHEFFACPERFYFFTPTGLSAGLQKVQGNVAEIVILLNRLPPDWLIHQTDAAQFSLFC
TPVINLFPRTTTRIEVTHSVTEQHLVVDRTRPLDYEVFSVQEVEGLEAETTRKMIFRPLYHTRNNDEGNHGRYFSLRREP
RRSSENARRYGTRTPYTGSEIFLSLVDQHEAPYPENLRHITVTAMVTNRDLPCLIPRNGRDDLTVDAAIPVAGVGLIRPP
RPPQPPLAEREMAWRLIRQLSFNYLPLADLDHRTGGQALRDLLNLFIPAHDSPQSRQVRSLIGCKTTPVTRRLPGSGLLV
YGRGVSCELTVDEEGFSGISPYLFGLVLEHYIARHVSINTFSQMTLHSMQRGHVMTWPVRTGQRGSV

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70551; Mature: 70551

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPRLLEYYNRELSYLRETGAEFATLHPKIAARLGMQGTDIADPYVERMIEAFSFLSART
CCCHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC
QLKIDAEFPRFTQRLLEVVSPNYVTPTPSMAVVKLYPDTQEGDLAKGVTVPRDTAFVSPI
EEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCC
PEGENTACQFRSSQDVTLWPLSIEEVRLTAAPPDMPALHRYLPPNIHVAGALRITLRTFG
CCCCCCEEEECCCCCCEEEECCHHHEEEECCCCCCHHHHHHCCCCEEEEEEEEEEEHHHH
ELTFSELAGPARLPFYLCGEERIASHLFELLHTSAVATLAGEPGHFDGELNVNLQHPVAH
CHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHH
EGLEPGQGLLPLAWNVFHGHNLLHEFFACPERFYFFTPTGLSAGLQKVQGNVAEIVILLN
CCCCCCCCCCHHEEHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHH
RLPPDWLIHQTDAAQFSLFCTPVINLFPRTTTRIEVTHSVTEQHLVVDRTRPLDYEVFSV
CCCCCCEEECCCCCCEEEEEHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEE
QEVEGLEAETTRKMIFRPLYHTRNNDEGNHGRYFSLRREPRRSSENARRYGTRTPYTGSE
HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCHHH
IFLSLVDQHEAPYPENLRHITVTAMVTNRDLPCLIPRNGRDDLTVDAAIPVAGVGLIRPP
HHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCEEECCCCCCCEEEEECCCCCCCCCCCCC
RPPQPPLAEREMAWRLIRQLSFNYLPLADLDHRTGGQALRDLLNLFIPAHDSPQSRQVRS
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
LIGCKTTPVTRRLPGSGLLVYGRGVSCELTVDEEGFSGISPYLFGLVLEHYIARHVSINT
HHCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCH
FSQMTLHSMQRGHVMTWPVRTGQRGSV
HHHHHHHHHHCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MDPRLLEYYNRELSYLRETGAEFATLHPKIAARLGMQGTDIADPYVERMIEAFSFLSART
CCCHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC
QLKIDAEFPRFTQRLLEVVSPNYVTPTPSMAVVKLYPDTQEGDLAKGVTVPRDTAFVSPI
EEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCC
PEGENTACQFRSSQDVTLWPLSIEEVRLTAAPPDMPALHRYLPPNIHVAGALRITLRTFG
CCCCCCEEEECCCCCCEEEECCHHHEEEECCCCCCHHHHHHCCCCEEEEEEEEEEEHHHH
ELTFSELAGPARLPFYLCGEERIASHLFELLHTSAVATLAGEPGHFDGELNVNLQHPVAH
CHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHH
EGLEPGQGLLPLAWNVFHGHNLLHEFFACPERFYFFTPTGLSAGLQKVQGNVAEIVILLN
CCCCCCCCCCHHEEHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHH
RLPPDWLIHQTDAAQFSLFCTPVINLFPRTTTRIEVTHSVTEQHLVVDRTRPLDYEVFSV
CCCCCCEEECCCCCCEEEEEHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEE
QEVEGLEAETTRKMIFRPLYHTRNNDEGNHGRYFSLRREPRRSSENARRYGTRTPYTGSE
HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCHHH
IFLSLVDQHEAPYPENLRHITVTAMVTNRDLPCLIPRNGRDDLTVDAAIPVAGVGLIRPP
HHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCEEECCCCCCCEEEEECCCCCCCCCCCCC
RPPQPPLAEREMAWRLIRQLSFNYLPLADLDHRTGGQALRDLLNLFIPAHDSPQSRQVRS
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
LIGCKTTPVTRRLPGSGLLVYGRGVSCELTVDEEGFSGISPYLFGLVLEHYIARHVSINT
HHCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCH
FSQMTLHSMQRGHVMTWPVRTGQRGSV
HHHHHHHHHHCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA