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The map label for this gene is sfmA [C]

Identifier: 194735954

GI number: 194735954

Start: 591168

End: 591725

Strand: Direct

Name: sfmA [C]

Synonym: SeSA_A0588

Alternate gene names: 194735954

Gene position: 591168-591725 (Clockwise)

Preceding gene: 194734068

Following gene: 194734453

Centisome position: 12.55

GC content: 54.3

Gene sequence:

>558_bases
ATGAAACATAAATTAATGACCTCTACTATTGCGAGTCTGATGTTTGTCGCTGGCGCAGCGGTTGCGGCTGATCCTACTCC
GGTGAGCGTGAGTGGCGGTACTATTCATTTCGAAGGTAAACTGGTTAATGCAGCCTGTGCCGTTAGCACTAAATCCGCCG
ATCAAACGGTGACGCTGGGTCAATACCGTACCGCCAGCTTTACGGCGATTGATGATACGACCGCGCAGGTGCCTTTCTCC
ATCGTCCTGAATGACTGCGATCCGAAAGTGGCGGCTACCGCTGCCGTGGCTTTCTCTGGTCAGGCAGATAACACCAACCC
TAATTTGCTGGCTGTCTCCTCTGCGGACAATAGCACTACCGCAACCGGCGTCGGGATTGAGATTCTTGATAACACCTCCT
CACCGTTGAAACCGGACGGCGCGACCTTCTCGGCGAAGCAGGCGCTGGTTGAAGGCACCAATACGCTGCGTTTTACCGCA
CGCTATAAGGCAACCGCCACCGCCACGACGCCAGGCCAGGCTAATGCCGACGCCACCTTTATCATGAAATACGAATAA

Upstream 100 bases:

>100_bases
CAGGATGCAGAGATAACTTTTCTGACATGCTATGTCGATAATAATTCAAACGGAGCCGACAGGATGCCGAAACCGGGTGT
GTGTAATTCAAGGGAAATCC

Downstream 100 bases:

>100_bases
TCCCGTCTGGGAACGCCAGGGAAGGGAGGCGCCTCAACGGAAGAGGCTATCGGGGATAAAAGAGAACATAGCAGATGATA
AGGAAAGGCGCGGCGCTAGT

Product: type-1 fimbrial protein, A chain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKHKLMTSTIASLMFVAGAAVAADPTPVSVSGGTIHFEGKLVNAACAVSTKSADQTVTLGQYRTASFTAIDDTTAQVPFS
IVLNDCDPKVAATAAVAFSGQADNTNPNLLAVSSADNSTTATGVGIEILDNTSSPLKPDGATFSAKQALVEGTNTLRFTA
RYKATATATTPGQANADATFIMKYE

Sequences:

>Translated_185_residues
MKHKLMTSTIASLMFVAGAAVAADPTPVSVSGGTIHFEGKLVNAACAVSTKSADQTVTLGQYRTASFTAIDDTTAQVPFS
IVLNDCDPKVAATAAVAFSGQADNTNPNLLAVSSADNSTTATGVGIEILDNTSSPLKPDGATFSAKQALVEGTNTLRFTA
RYKATATATTPGQANADATFIMKYE
>Mature_185_residues
MKHKLMTSTIASLMFVAGAAVAADPTPVSVSGGTIHFEGKLVNAACAVSTKSADQTVTLGQYRTASFTAIDDTTAQVPFS
IVLNDCDPKVAATAAVAFSGQADNTNPNLLAVSSADNSTTATGVGIEILDNTSSPLKPDGATFSAKQALVEGTNTLRFTA
RYKATATATTPGQANADATFIMKYE

Specific function: Fimbriae (Also Called Pili), Polar Filaments Radiating From The Surface Of The Bacterium To A Length Of 0.5-1.5 Micrometers And Numbering 100-300 Per Cell, Enable Bacteria To Colonize The Epithelium Of Specific Host Organs (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87081753, Length=156, Percent_Identity=70.5128205128205, Blast_Score=204, Evalue=4e-54,
Organism=Escherichia coli, GI1790769, Length=157, Percent_Identity=54.140127388535, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI87082421, Length=187, Percent_Identity=32.620320855615, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1790773, Length=187, Percent_Identity=33.6898395721925, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1786746, Length=185, Percent_Identity=32.972972972973, Blast_Score=81, Evalue=3e-17,
Organism=Escherichia coli, GI1787781, Length=153, Percent_Identity=33.9869281045752, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787174, Length=173, Percent_Identity=31.7919075144509, Blast_Score=74, Evalue=4e-15,
Organism=Escherichia coli, GI1789422, Length=186, Percent_Identity=29.5698924731183, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18929; Mature: 18929

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKLMTSTIASLMFVAGAAVAADPTPVSVSGGTIHFEGKLVNAACAVSTKSADQTVTLG
CCCCHHHHHHHHHHHHHCCCEECCCCCEEECCCEEEECCEEEEEEEEEECCCCCCEEEEC
QYRTASFTAIDDTTAQVPFSIVLNDCDPKVAATAAVAFSGQADNTNPNLLAVSSADNSTT
CEECEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCE
ATGVGIEILDNTSSPLKPDGATFSAKQALVEGTNTLRFTARYKATATATTPGQANADATF
EEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCCCEEE
IMKYE
EEEEC
>Mature Secondary Structure
MKHKLMTSTIASLMFVAGAAVAADPTPVSVSGGTIHFEGKLVNAACAVSTKSADQTVTLG
CCCCHHHHHHHHHHHHHCCCEECCCCCEEECCCEEEECCEEEEEEEEEECCCCCCEEEEC
QYRTASFTAIDDTTAQVPFSIVLNDCDPKVAATAAVAFSGQADNTNPNLLAVSSADNSTT
CEECEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCE
ATGVGIEILDNTSSPLKPDGATFSAKQALVEGTNTLRFTARYKATATATTPGQANADATF
EEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCCCEEE
IMKYE
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2890624 [H]