Click here to switch to the map view.

The map label for this gene is fimI [H]

Identifier: 194734453

GI number: 194734453

Start: 591839

End: 592333

Strand: Direct

Name: fimI [H]

Synonym: SeSA_A0589

Alternate gene names: 194734453

Gene position: 591839-592333 (Clockwise)

Preceding gene: 194735954

Following gene: 194737175

Centisome position: 12.57

GC content: 53.74

Gene sequence:

>495_bases
ATGTCGCCCGTTATTGCGCAGCCGGTAATGGTGGAGAGCGGGCGTATTCACCTGCGCGGACAACTGGTCAATGGCGGCTG
CGCTGTCGCCACTGAAAGCCAGGATTTGCGCGTACTGATGGGACAGTACCGCACGAATGCGTTTACCGGTCCTGGCAGCT
TCGCTCCCGTCAGCGTTCCATTTTCGTTACGGTTAATCTCTTGTAGCGCGGAGGTCTGGCGTCATGTCGGCATTGCGTTT
GCCGGCGTTACGCCTGCGGAAGATCCCCATGTTTTTCTGGCCAGCGGCGAGGGTATCGGTAATGCCGGAATCGGCCTGGC
ATTATTTGATGACCAGCAGCGGCAAATCATACCTAACACGTTACCGCTTCATTACACGCCCATTTTAACGTCAGAAATGA
CTTTGCATTTTACTGCCCGCTATCGGGCAATTTCAGAAAATATGACGCCGGGACGAATTCATTCAGAAGTGTGGTTTACG
CTGGTTTACCCATGA

Upstream 100 bases:

>100_bases
CGCCAGGGAAGGGAGGCGCCTCAACGGAAGAGGCTATCGGGGATAAAAGAGAACATAGCAGATGATAAGGAAAGGCGCGG
CGCTAGTGGGGCTTGTTTTG

Downstream 100 bases:

>100_bases
ATTTTCTTGCCGACGTGACTCAATGCAAAAGGTATTTTTTACCATGCTGAATAGTATAAAATTAGGCTTTATTGTTCTTC
TCACGTTATTTACTTCGCTG

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSPVIAQPVMVESGRIHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPVSVPFSLRLISCSAEVWRHVGIAF
AGVTPAEDPHVFLASGEGIGNAGIGLALFDDQQRQIIPNTLPLHYTPILTSEMTLHFTARYRAISENMTPGRIHSEVWFT
LVYP

Sequences:

>Translated_164_residues
MSPVIAQPVMVESGRIHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPVSVPFSLRLISCSAEVWRHVGIAF
AGVTPAEDPHVFLASGEGIGNAGIGLALFDDQQRQIIPNTLPLHYTPILTSEMTLHFTARYRAISENMTPGRIHSEVWFT
LVYP
>Mature_163_residues
SPVIAQPVMVESGRIHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPVSVPFSLRLISCSAEVWRHVGIAFA
GVTPAEDPHVFLASGEGIGNAGIGLALFDDQQRQIIPNTLPLHYTPILTSEMTLHFTARYRAISENMTPGRIHSEVWFTL
VYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87082421, Length=151, Percent_Identity=35.0993377483444, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI87081753, Length=158, Percent_Identity=29.1139240506329, Blast_Score=74, Evalue=3e-15,
Organism=Escherichia coli, GI1790773, Length=157, Percent_Identity=29.9363057324841, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 17819; Mature: 17687

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVIAQPVMVESGRIHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPVSVP
CCCCCCCCEEEECCEEEEEEEEECCCEEEEECCCCCEEEEECCCCCEECCCCCCCEEECC
FSLRLISCSAEVWRHVGIAFAGVTPAEDPHVFLASGEGIGNAGIGLALFDDQQRQIIPNT
EEEEEEEECHHHHHHHCEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEECCCC
LPLHYTPILTSEMTLHFTARYRAISENMTPGRIHSEVWFTLVYP
CCEEEEEEEECCEEEEEEEEEEEECCCCCCCEEECEEEEEEECC
>Mature Secondary Structure 
SPVIAQPVMVESGRIHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPVSVP
CCCCCCCEEEECCEEEEEEEEECCCEEEEECCCCCEEEEECCCCCEECCCCCCCEEECC
FSLRLISCSAEVWRHVGIAFAGVTPAEDPHVFLASGEGIGNAGIGLALFDDQQRQIIPNT
EEEEEEEECHHHHHHHCEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEECCCC
LPLHYTPILTSEMTLHFTARYRAISENMTPGRIHSEVWFTLVYP
CCEEEEEEEECCEEEEEEEEEEEECCCCCCCEEECEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8288102; 11677608; 12644504 [H]