| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yfcJ [C]
Identifier: 194735953
GI number: 194735953
Start: 2487691
End: 2488869
Strand: Reverse
Name: yfcJ [C]
Synonym: SeSA_A2602
Alternate gene names: 194735953
Gene position: 2488869-2487691 (Counterclockwise)
Preceding gene: 194734954
Following gene: 194736566
Centisome position: 52.85
GC content: 60.39
Gene sequence:
>1179_bases ATGACAGCAGTTAGCCAAAAAACAACGACCCCGTCTGCGAATTTTTCGCTGTTCCGCATCGCCTTTGCGGTTTTCCTGAC CTATATGACGGTCGGCCTGCCGTTACCCGTCATCCCGCTTTTTGTCCATCACGAACTGGGCTATAGCAATACGATGGTTG GGATCGCCGTGGGCATTCAGTTTTTTGCGACGGTACTGACGCGCGGCTATGCCGGACGGCTGGCGGATCAATATGGCGCT AAACGATCGGCGTTACAGGGGATGTTTGCCTGCGGGCTGGCGGGCGCCGCCTGGCTCCTGGCCGCGCTGTTGCCAGTTTC CGCGCCGATAAAATTCACGCTGCTTATTGTCGGGCGTTTGATCCTCGGATTTGGCGAAAGCCAGCTGCTGACCGGAACCC TGACTTGGGGACTGGGGCTGGTTGGCCCAACGCGTTCCGGTAAGGTGATGTCGTGGAACGGAATGGCGATTTACGGCGCG CTGGCGGCCGGTGCGCCGTTGGGCTTGCTGATCCATAGCCACTTTGGCTTCGCGGCGCTGGCGGGGACGACGATGGTTTT ACCGCTGCTGGCCTGGGCATTCAACGGCACCGTGCGTAAAGTGCCTGCGTATACGGGGGAGCGACCTTCACTGTGGAGCG TGGTCGGGCTTATCTGGAAACCGGGCCTGGGCCTGGCATTGCAGGGCGTGGGCTTTGCCGTCATCGGTACGTTTATTTCA CTTTATTTTGTCAGCAATGGCTGGACGATGGCGGGATTCACCCTGACCGCGTTTGGCGGTGCGTTTGTACTGATGCGCAT ATTGTTCGGTTGGATGCCGGACCGCTTTGGCGGCGTGAAGGTCGCCGTTGTCTCATTGCTGGTTGAGACGGCAGGACTGC TGCTCTTGTGGCTGGCGCCGACGGCCTGGATAGCGCTGGTAGGCGCGGCGCTCACCGGGGCTGGGTGTTCACTGATTTTC CCGGCGCTGGGCGTGGAGGTTGTGAAACGCGTACCTGCACAGGTACGCGGTACGGCGCTCGGCGGCTACGCCGCGTTTCA GGATATCTCCTACGGCGTTACCGGCCCGCTGGCGGGCATGCTGGCCACGTCATGCGGCTATCCTTCCGTATTTCTCGCGG GAGCGATCTCCGCAGTGGTTGGCATCCTGGTGACGATATTATCGTTCCGGCGTGGTTAA
Upstream 100 bases:
>100_bases TGCGTAAGCGTTTAACGTTATCCAACGCACCTTAATCCTGACGTTCAGGTAGAGGGGGGCGTGGCCTTTCCCCGCCTTAC TCTGCATTCTGGAGTAATGC
Downstream 100 bases:
>100_bases GAAACCAGCCAGAAAAGCGCCAGTACAATTATTAGCGCGATAAACAACAGGCCTGGTCGCGCAGACAGATTTTTCACGGT TTCAATCATCGGCGCGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MTAVSQKTTTPSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYSNTMVGIAVGIQFFATVLTRGYAGRLADQYGA KRSALQGMFACGLAGAAWLLAALLPVSAPIKFTLLIVGRLILGFGESQLLTGTLTWGLGLVGPTRSGKVMSWNGMAIYGA LAAGAPLGLLIHSHFGFAALAGTTMVLPLLAWAFNGTVRKVPAYTGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFIS LYFVSNGWTMAGFTLTAFGGAFVLMRILFGWMPDRFGGVKVAVVSLLVETAGLLLLWLAPTAWIALVGAALTGAGCSLIF PALGVEVVKRVPAQVRGTALGGYAAFQDISYGVTGPLAGMLATSCGYPSVFLAGAISAVVGILVTILSFRRG
Sequences:
>Translated_392_residues MTAVSQKTTTPSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYSNTMVGIAVGIQFFATVLTRGYAGRLADQYGA KRSALQGMFACGLAGAAWLLAALLPVSAPIKFTLLIVGRLILGFGESQLLTGTLTWGLGLVGPTRSGKVMSWNGMAIYGA LAAGAPLGLLIHSHFGFAALAGTTMVLPLLAWAFNGTVRKVPAYTGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFIS LYFVSNGWTMAGFTLTAFGGAFVLMRILFGWMPDRFGGVKVAVVSLLVETAGLLLLWLAPTAWIALVGAALTGAGCSLIF PALGVEVVKRVPAQVRGTALGGYAAFQDISYGVTGPLAGMLATSCGYPSVFLAGAISAVVGILVTILSFRRG >Mature_391_residues TAVSQKTTTPSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYSNTMVGIAVGIQFFATVLTRGYAGRLADQYGAK RSALQGMFACGLAGAAWLLAALLPVSAPIKFTLLIVGRLILGFGESQLLTGTLTWGLGLVGPTRSGKVMSWNGMAIYGAL AAGAPLGLLIHSHFGFAALAGTTMVLPLLAWAFNGTVRKVPAYTGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFISL YFVSNGWTMAGFTLTAFGGAFVLMRILFGWMPDRFGGVKVAVVSLLVETAGLLLLWLAPTAWIALVGAALTGAGCSLIFP ALGVEVVKRVPAQVRGTALGGYAAFQDISYGVTGPLAGMLATSCGYPSVFLAGAISAVVGILVTILSFRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0226 family [H]
Homologues:
Organism=Escherichia coli, GI1788662, Length=392, Percent_Identity=88.265306122449, Blast_Score=628, Evalue=0.0, Organism=Escherichia coli, GI87082270, Length=372, Percent_Identity=43.010752688172, Blast_Score=263, Evalue=2e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR023008 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40774; Mature: 40643
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVSQKTTTPSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYSNTMVGIAVGIQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHH FFATVLTRGYAGRLADQYGAKRSALQGMFACGLAGAAWLLAALLPVSAPIKFTLLIVGRL HHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ILGFGESQLLTGTLTWGLGLVGPTRSGKVMSWNGMAIYGALAAGAPLGLLIHSHFGFAAL HHCCCCCCEEEEEHHHCCCCCCCCCCCCEEEECCEEEEHHHHCCCCHHHHHHCCCCHHHH AGTTMVLPLLAWAFNGTVRKVPAYTGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFIS HHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHH LYFVSNGWTMAGFTLTAFGGAFVLMRILFGWMPDRFGGVKVAVVSLLVETAGLLLLWLAP HHHHCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TAWIALVGAALTGAGCSLIFPALGVEVVKRVPAQVRGTALGGYAAFQDISYGVTGPLAGM HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCCCHHHHHH LATSCGYPSVFLAGAISAVVGILVTILSFRRG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAVSQKTTTPSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYSNTMVGIAVGIQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHH FFATVLTRGYAGRLADQYGAKRSALQGMFACGLAGAAWLLAALLPVSAPIKFTLLIVGRL HHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ILGFGESQLLTGTLTWGLGLVGPTRSGKVMSWNGMAIYGALAAGAPLGLLIHSHFGFAAL HHCCCCCCEEEEEHHHCCCCCCCCCCCCEEEECCEEEEHHHHCCCCHHHHHHCCCCHHHH AGTTMVLPLLAWAFNGTVRKVPAYTGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFIS HHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHH LYFVSNGWTMAGFTLTAFGGAFVLMRILFGWMPDRFGGVKVAVVSLLVETAGLLLLWLAP HHHHCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TAWIALVGAALTGAGCSLIFPALGVEVVKRVPAQVRGTALGGYAAFQDISYGVTGPLAGM HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCCCHHHHHH LATSCGYPSVFLAGAISAVVGILVTILSFRRG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA