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The map label for this gene is agaC [H]

Identifier: 194735621

GI number: 194735621

Start: 4652241

End: 4653020

Strand: Direct

Name: agaC [H]

Synonym: SeSA_A4791

Alternate gene names: 194735621

Gene position: 4652241-4653020 (Clockwise)

Preceding gene: 194735118

Following gene: 194734138

Centisome position: 98.79

GC content: 50.77

Gene sequence:

>780_bases
ATGGTAGAGGCGCTTTTACTTGGACTGGTGGCGTTTATCGCCCAGTCTGAATATGCATTAGGGACGTCGCTGATTTCCAG
ACCTATCGTGACCGGACTGTTAACCGGACTGGTGCTGGGCGACATGGAAACCGGAATTGTGATGGGCGCGACGCTGGAGT
TGGCGTTTATCGGTTCCTTTTCGGTGGGCGCGTCGCTGCCGCCGGATGTGGTCACTGGCGGTATTTTAGGTGTGGCCTTT
GCGATTAATTCCGGCGCCGGGGCGGAAACCGCGCTGTTATTAGGTTTGCCTATCGCGACACTGGCGTTAATTGTGAAAAA
TATCTATAACGGAATGTTTATTCCGTTGCTCTGTCATAAAGCCGATGCTTACGCTGAGGTAGGGGATACCCGGGGCATTG
AGCGTATGCATTTAATCTCCGGCATTGGGCTGTCGCTGACGTTGGGGATTATCGTCACGGTCTCTTATTTAGCGGGCGTG
AATATGGTTAAAGGTTTTCTGGATGCCATTCCAGAATTTATTAAACATGGATTAAGCGTTGCCACCGGTATTATTCCCGC
GCTGGGTTTTGCCATGCTGGCGCGCTTATTAATTAATAAAAAGGTCGCCCCCTATTTTTTCCTCGGTTTCGTCTTAATGG
CGTATTTAAAAATTCCGGTGACGGGTATTGCGATTCTTGGCGCGATCGTCGCCGTCGTGATGGTCAATATGCCGAAATTT
GCGGCCTCGCAACCGGCACCTGCGCAAGGAGCGTCTCATGACGATGAAGATGATTTCTGA

Upstream 100 bases:

>100_bases
CGGGAGCTGGCGGCTGGCGGAGTAGAGATAGAAATTCGGCTGGTGCCTAACGATCGTAAACAACTTTTTGCCTGAGCGGA
TACCCTCCTGAGGACATATT

Downstream 100 bases:

>100_bases
TAAAGACCGCCAGCAGGCGGAAACCACTGGTCTGGTCACCGCGCGTGATTTACGCCGCGTTTTCTGGCGGTCATTCCAGA
TGGAGTTTTCCTGGAACTAT

Product: phosphotransferase enzyme II C component

Products: NA

Alternate protein names: EIIC-Aga; PTS system N-acetylgalactosamine-specific EIIC component 1 [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDMETGIVMGATLELAFIGSFSVGASLPPDVVTGGILGVAF
AINSGAGAETALLLGLPIATLALIVKNIYNGMFIPLLCHKADAYAEVGDTRGIERMHLISGIGLSLTLGIIVTVSYLAGV
NMVKGFLDAIPEFIKHGLSVATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGAIVAVVMVNMPKF
AASQPAPAQGASHDDEDDF

Sequences:

>Translated_259_residues
MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDMETGIVMGATLELAFIGSFSVGASLPPDVVTGGILGVAF
AINSGAGAETALLLGLPIATLALIVKNIYNGMFIPLLCHKADAYAEVGDTRGIERMHLISGIGLSLTLGIIVTVSYLAGV
NMVKGFLDAIPEFIKHGLSVATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGAIVAVVMVNMPKF
AASQPAPAQGASHDDEDDF
>Mature_259_residues
MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDMETGIVMGATLELAFIGSFSVGASLPPDVVTGGILGVAF
AINSGAGAETALLLGLPIATLALIVKNIYNGMFIPLLCHKADAYAEVGDTRGIERMHLISGIGLSLTLGIIVTVSYLAGV
NMVKGFLDAIPEFIKHGLSVATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGAIVAVVMVNMPKF
AASQPAPAQGASHDDEDDF

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3715

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1789528, Length=261, Percent_Identity=30.2681992337165, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1788121, Length=262, Percent_Identity=31.6793893129771, Blast_Score=107, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004700
- InterPro:   IPR018404 [H]

Pfam domain/function: PF03609 EII-Sor [H]

EC number: NA

Molecular weight: Translated: 26756; Mature: 26756

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS51106 PTS_EIIC_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDMETGIVMGATLELAFIGSF
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHEEEEEEECC
SVGASLPPDVVTGGILGVAFAINSGAGAETALLLGLPIATLALIVKNIYNGMFIPLLCHK
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ADAYAEVGDTRGIERMHLISGIGLSLTLGIIVTVSYLAGVNMVKGFLDAIPEFIKHGLSV
HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGAIVAVVMVNMPKF
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHH
AASQPAPAQGASHDDEDDF
HCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVEALLLGLVAFIAQSEYALGTSLISRPIVTGLLTGLVLGDMETGIVMGATLELAFIGSF
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHEEEEEEECC
SVGASLPPDVVTGGILGVAFAINSGAGAETALLLGLPIATLALIVKNIYNGMFIPLLCHK
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ADAYAEVGDTRGIERMHLISGIGLSLTLGIIVTVSYLAGVNMVKGFLDAIPEFIKHGLSV
HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGIIPALGFAMLARLLINKKVAPYFFLGFVLMAYLKIPVTGIAILGAIVAVVMVNMPKF
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHH
AASQPAPAQGASHDDEDDF
HCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 8932697 [H]