| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is ycbZ [H]
Identifier: 194735395
GI number: 194735395
Start: 1117383
End: 1119143
Strand: Reverse
Name: ycbZ [H]
Synonym: SeSA_A1131
Alternate gene names: 194735395
Gene position: 1119143-1117383 (Counterclockwise)
Preceding gene: 194734413
Following gene: 194736093
Centisome position: 23.77
GC content: 53.61
Gene sequence:
>1761_bases TTGACCATTACGAAACTTGCATGGCGTGATCTGGTTCCGGATAGCGAAAGCTATCAGGAGATATTTGCACAGCCACACGC GACTGACGAAAACGACACCTTACTCAGTGATACTCAGCCACGACTGCAATTTGCGCTTGAGCAACTTATACAGCCGTGGG CATCATCCTCTTTTATGCTGACTAAAGCGCCTGAAGAGCAAGAGTATCTCACTTTACTTTCAGATGCCGTCCGCGCTCTG CAAACCGATGCCGGACAATTAACCGGCGGACATTATGACGTTTCCGGGCATACTATTCATTACCGCGCCGCGCAGAATGC GCAAGACAACTTTGCCACCGTCACACAAGTCGTCAGCGCGGACTGGGTCGAAGCCGAACAGCTCTTTGGTTGCCTGCGGC AGTATAACGGCGACATTACCCTGCAGCCGGGACTGGTTCATCAGGCGAACGGCGGCGTGCTGATTATTTCCTTACGAACC CTTCTGGCGCAGCCGTTGCTATGGATGCGTCTGAAAGCCATCGTTAGCCGCGAGCGTTTTGACTGGGTGGCGTTTGACGA GTCGCGTCCATTACCGGTCTCCGTGCCATCAATGCCGCTCAAACTGAAGGTGATTCTGGTTGGCGAACGTGAATCACTGG CTGATTTTCAGGAAATGGAACCGGAGCTCGCGGAACAGGCTATCTACAGTGAATTTGAAGACAATTTACAGATAGCGGAC GCAGAAGCTATGACCCTATGGTGTCAATGGGTGACGCGTATCGCTTTACGCGATAATTTGCCCCCTCCGGCACCAGACGC CTGGCCCGTCCTGATACGCGAGGCTGTGCGCTATACCGGCGAACAGGATACGCTGCCTCTTTGCCCACTGTGGATAGCCC GCCAGTTTAAGGAGGCATCGCCTTTATGCGAAGGCGATACCTGCGGCGCAGAAGCGCTCAGTCTGATGCTTGCCCGACGC GAATGGCGAGAAGGCTTTCTGGCGGAACGGATGCAGGATGAGATTCTGCAAGAGCAGATCCTGATTGAAACCGAAGGCGA ACGCGTTGGACAAATCAATGCGCTTTCCGTCATTGAGTTTCCCGGGCATCCGCGCGCCGTTGGCGAACCGTCGCGAATTA GCTGTGTTGTGCATATCGGCGATGGCGAATTTAACGATATTGAGCGCAAGGCCGAACTTGGCGGAAATATCCACGCTAAG GGAATGATGATTATGCAGGCCTTCCTGATGTCGGAGTTGCAGCTGGAGCAACAAATTCCCTTCTCTGCCTCGTTAACCTT TGAGCAATCCTACAGCGAAGTGGATGGCGATAGCGCCTCAATGGCGGAATTATGTGCGCTCATCAGCGCGCTGGCCAATG TGCCAGTGAATCAAAACATTGCGATTACCGGCTCGGTCGATCAGTTTGGTCGCGCGCAACCGGTGGGCGGGCTAAACGAA AAAATTGAAGGTTTCTTCGCCATCTGCGAGCAGCGGGAATTAAACGGTAAACAGGGCGTAATTATCCCTGCCGCCAACGT CCGCCATCTCAGTCTTAAATCTGAACTGCTGCAAGCGGTTAAAGAAGAGAAGTTCACTATCTGGGCGGTAGACGACGTGA CCGACGCCTTACCGCTACTGTTAAATCTGGTGTGGGATGGCGAAGGTCAAACGACGTTGATGCAGACTATCCAGGAGCGT ATCGCGCAGGCGACGCAACAGGAAGGCCGTCATCGTTTCCCGTGGCCATTACGTTGGCTGAACGCTTTTATTCCGAACTG A
Upstream 100 bases:
>100_bases TTACACGTCTTCATATTACTTTGCATTCGCTTTCCGCGTGTGCAGCGTGACGGGTTAGGCTATAATCCCCCCTTTTACAA CAGACTAAAAAACCTCAACT
Downstream 100 bases:
>100_bases TCGGACTTGTTCAGCGTACACGTGTTAGCTATCCTGCGTGCTTCAATAAAATAAGGTTTACATAAAACATGGTAGATAAA CGCGAATCCTATACAAAAGA
Product: protease La-like protein
Products: NA
Alternate protein names: ATP-dependent protease La homolog [H]
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MTITKLAWRDLVPDSESYQEIFAQPHATDENDTLLSDTQPRLQFALEQLIQPWASSSFMLTKAPEEQEYLTLLSDAVRAL QTDAGQLTGGHYDVSGHTIHYRAAQNAQDNFATVTQVVSADWVEAEQLFGCLRQYNGDITLQPGLVHQANGGVLIISLRT LLAQPLLWMRLKAIVSRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELAEQAIYSEFEDNLQIAD AEAMTLWCQWVTRIALRDNLPPPAPDAWPVLIREAVRYTGEQDTLPLCPLWIARQFKEASPLCEGDTCGAEALSLMLARR EWREGFLAERMQDEILQEQILIETEGERVGQINALSVIEFPGHPRAVGEPSRISCVVHIGDGEFNDIERKAELGGNIHAK GMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISALANVPVNQNIAITGSVDQFGRAQPVGGLNE KIEGFFAICEQRELNGKQGVIIPAANVRHLSLKSELLQAVKEEKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQER IAQATQQEGRHRFPWPLRWLNAFIPN
Sequences:
>Translated_586_residues MTITKLAWRDLVPDSESYQEIFAQPHATDENDTLLSDTQPRLQFALEQLIQPWASSSFMLTKAPEEQEYLTLLSDAVRAL QTDAGQLTGGHYDVSGHTIHYRAAQNAQDNFATVTQVVSADWVEAEQLFGCLRQYNGDITLQPGLVHQANGGVLIISLRT LLAQPLLWMRLKAIVSRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELAEQAIYSEFEDNLQIAD AEAMTLWCQWVTRIALRDNLPPPAPDAWPVLIREAVRYTGEQDTLPLCPLWIARQFKEASPLCEGDTCGAEALSLMLARR EWREGFLAERMQDEILQEQILIETEGERVGQINALSVIEFPGHPRAVGEPSRISCVVHIGDGEFNDIERKAELGGNIHAK GMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISALANVPVNQNIAITGSVDQFGRAQPVGGLNE KIEGFFAICEQRELNGKQGVIIPAANVRHLSLKSELLQAVKEEKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQER IAQATQQEGRHRFPWPLRWLNAFIPN >Mature_585_residues TITKLAWRDLVPDSESYQEIFAQPHATDENDTLLSDTQPRLQFALEQLIQPWASSSFMLTKAPEEQEYLTLLSDAVRALQ TDAGQLTGGHYDVSGHTIHYRAAQNAQDNFATVTQVVSADWVEAEQLFGCLRQYNGDITLQPGLVHQANGGVLIISLRTL LAQPLLWMRLKAIVSRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELAEQAIYSEFEDNLQIADA EAMTLWCQWVTRIALRDNLPPPAPDAWPVLIREAVRYTGEQDTLPLCPLWIARQFKEASPLCEGDTCGAEALSLMLARRE WREGFLAERMQDEILQEQILIETEGERVGQINALSVIEFPGHPRAVGEPSRISCVVHIGDGEFNDIERKAELGGNIHAKG MMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISALANVPVNQNIAITGSVDQFGRAQPVGGLNEK IEGFFAICEQRELNGKQGVIIPAANVRHLSLKSELLQAVKEEKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERI AQATQQEGRHRFPWPLRWLNAFIPN
Specific function: Unknown
COG id: COG1067
COG function: function code O; Predicted ATP-dependent protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S16 family [H]
Homologues:
Organism=Escherichia coli, GI1787188, Length=586, Percent_Identity=85.8361774744027, Blast_Score=1037, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008269 - InterPro: IPR001984 - InterPro: IPR020568 [H]
Pfam domain/function: PF05362 Lon_C [H]
EC number: 3.4.21.-
Molecular weight: Translated: 65570; Mature: 65439
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITKLAWRDLVPDSESYQEIFAQPHATDENDTLLSDTQPRLQFALEQLIQPWASSSFML CCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE TKAPEEQEYLTLLSDAVRALQTDAGQLTGGHYDVSGHTIHYRAAQNAQDNFATVTQVVSA ECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHHHH DWVEAEQLFGCLRQYNGDITLQPGLVHQANGGVLIISLRTLLAQPLLWMRLKAIVSRERF HHHHHHHHHHHHHHHCCCEEECCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHC DWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELAEQAIYSEFEDNLQIAD CEEEECCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEC AEAMTLWCQWVTRIALRDNLPPPAPDAWPVLIREAVRYTGEQDTLPLCPLWIARQFKEAS HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC PLCEGDTCGAEALSLMLARREWREGFLAERMQDEILQEQILIETEGERVGQINALSVIEF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEC PGHPRAVGEPSRISCVVHIGDGEFNDIERKAELGGNIHAKGMMIMQAFLMSELQLEQQIP CCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCC FSASLTFEQSYSEVDGDSASMAELCALISALANVPVNQNIAITGSVDQFGRAQPVGGLNE CCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCCHH KIEGFFAICEQRELNGKQGVIIPAANVRHLSLKSELLQAVKEEKFTIWAVDDVTDALPLL HHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHH LNLVWDGEGQTTLMQTIQERIAQATQQEGRHRFPWPLRWLNAFIPN HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure TITKLAWRDLVPDSESYQEIFAQPHATDENDTLLSDTQPRLQFALEQLIQPWASSSFML CCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE TKAPEEQEYLTLLSDAVRALQTDAGQLTGGHYDVSGHTIHYRAAQNAQDNFATVTQVVSA ECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHHHH DWVEAEQLFGCLRQYNGDITLQPGLVHQANGGVLIISLRTLLAQPLLWMRLKAIVSRERF HHHHHHHHHHHHHHHCCCEEECCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHC DWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELAEQAIYSEFEDNLQIAD CEEEECCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEC AEAMTLWCQWVTRIALRDNLPPPAPDAWPVLIREAVRYTGEQDTLPLCPLWIARQFKEAS HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC PLCEGDTCGAEALSLMLARREWREGFLAERMQDEILQEQILIETEGERVGQINALSVIEF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEC PGHPRAVGEPSRISCVVHIGDGEFNDIERKAELGGNIHAKGMMIMQAFLMSELQLEQQIP CCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCC FSASLTFEQSYSEVDGDSASMAELCALISALANVPVNQNIAITGSVDQFGRAQPVGGLNE CCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCCHH KIEGFFAICEQRELNGKQGVIIPAANVRHLSLKSELLQAVKEEKFTIWAVDDVTDALPLL HHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHH LNLVWDGEGQTTLMQTIQERIAQATQQEGRHRFPWPLRWLNAFIPN HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]