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The map label for this gene is ompA [H]

Identifier: 194734413

GI number: 194734413

Start: 1119853

End: 1120962

Strand: Reverse

Name: ompA [H]

Synonym: SeSA_A1133

Alternate gene names: 194734413

Gene position: 1120962-1119853 (Counterclockwise)

Preceding gene: 194734292

Following gene: 194735395

Centisome position: 23.8

GC content: 53.51

Gene sequence:

>1110_bases
GTGTTATCTCGTTGGAGATATTCATGGCGTATTTTGGATGATAACGAGGCGCAAAAAATGAAAAAGACAGCTATCGCGAT
TGCAGTGGCACTGGCTGGTTTCGCTACCGTAGCGCAGGCCGCTCCGAAAGATAACACCTGGTACGCTGGTGCTAAACTGG
GCTGGTCTCAGTACCATGACACCGGCTTCATTAACAATGATGGCCCGACTCATGAAAACCAACTGGGCGCAGGTGCTTTT
GGTGGTTACCAGGTTAACCCGTACGTTGGCTTTGAAATGGGCTACGACTGGTTAGGCCGTATGCCGTACAAAGGCGACAA
CATCAATGGCGCTTATAAAGCTCAGGGCGTTCAGTTGACCGCTAAACTGGGTTATCCAATCACTGACGATCTGGACGTTT
ATACCCGTCTGGGTGGTATGGTATGGCGTGCAGACACCAAGTCTAACGTCCCTGGCGGCGCGTCTACTAAAGACCACGAC
ACCGGCGTTTCCCCGGTATTCGCGGGCGGTATCGAGTATGCCATCACCCCTGAAATCGCAACCCGTCTGGAATACCAGTG
GACTAACAACATCGGTGATGCCAACACCATCGGCACCCGTCCGGACAACGGCCTGCTGAGCGTAGGTGTTTCCTACCGTT
TCGGCCAGCAAGAAGCTGCTCCGGTAGTAGCTCCGGCACCGGCTCCGGCTCCGGAAGTACAGACCAAGCACTTCACTCTG
AAGTCTGACGTACTGTTCAACTTCAACAAAGCAACTCTGAAACCAGAAGGCCAGCAGGCTCTGGATCAGCTGTACAGCCA
GCTGAGCAACCTGGATCCGAAAGACGGTTCCGTCGTCGTTCTGGGCTTCACTGACCGTATCGGTTCTGACGCTTACAACC
AGGGTCTGTCCGAGAAACGTGCTCAGTCTGTTGTTGATTACCTGATCTCCAAAGGTATTCCGTCTGACAAAATCTCCGCA
CGTGGTATGGGCGAATCTAACCCGGTTACCGGCAACACCTGTGACAACGTGAAACCTCGCGCTGCCCTGATCGATTGCCT
GGCTCCGGATCGTCGCGTAGAGATCGAAGTTAAAGGCGTTAAAGACGTGGTAACTCAGCCGCAGGCTTAA

Upstream 100 bases:

>100_bases
CAACTACGTTGTAGACTTTACATCGCCAGGGGTGCTCAGCATAAGCCGTAGATATCGGTAGAGTAACTATTGAGCAGATC
CCCCGGTGAAGGATTTAACC

Downstream 100 bases:

>100_bases
GTTTCCGTCTGATAAAAAACCCCGCGTCGCGGGGTTTTTTGCTCTGGTCTGGATGACAACGCCTTTCAGCGTTACTTCTT
GCCTAATAACGCCTGTAAAT

Product: outer membrane protein A

Products: NA

Alternate protein names: Outer membrane protein II [H]

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MLSRWRYSWRILDDNEAQKMKKTAIAIAVALAGFATVAQAAPKDNTWYAGAKLGWSQYHDTGFINNDGPTHENQLGAGAF
GGYQVNPYVGFEMGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGASTKDHD
TGVSPVFAGGIEYAITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRFGQQEAAPVVAPAPAPAPEVQTKHFTL
KSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLISKGIPSDKISA
RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKGVKDVVTQPQA

Sequences:

>Translated_369_residues
MLSRWRYSWRILDDNEAQKMKKTAIAIAVALAGFATVAQAAPKDNTWYAGAKLGWSQYHDTGFINNDGPTHENQLGAGAF
GGYQVNPYVGFEMGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGASTKDHD
TGVSPVFAGGIEYAITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRFGQQEAAPVVAPAPAPAPEVQTKHFTL
KSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLISKGIPSDKISA
RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKGVKDVVTQPQA
>Mature_369_residues
MLSRWRYSWRILDDNEAQKMKKTAIAIAVALAGFATVAQAAPKDNTWYAGAKLGWSQYHDTGFINNDGPTHENQLGAGAF
GGYQVNPYVGFEMGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGASTKDHD
TGVSPVFAGGIEYAITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRFGQQEAAPVVAPAPAPAPEVQTKHFTL
KSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLISKGIPSDKISA
RGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKGVKDVVTQPQA

Specific function: Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes [H

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=350, Percent_Identity=93.4285714285714, Blast_Score=642, Evalue=0.0,
Organism=Escherichia coli, GI48994946, Length=120, Percent_Identity=34.1666666666667, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 39900; Mature: 39900

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRWRYSWRILDDNEAQKMKKTAIAIAVALAGFATVAQAAPKDNTWYAGAKLGWSQYHD
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHCC
TGFINNDGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGDNINGAYKAQGVQLT
CCCCCCCCCCCCCCCCCCCCCCEEECCEEEHCCCHHHHCCCCCCCCCCCCEEEECCEEEE
AKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGASTKDHDTGVSPVFAGGIEYAITPEIA
EEECCCCCCCHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECHHHH
TRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRFGQQEAAPVVAPAPAPAPEVQTKHFTL
HEEEEEECCCCCCCCCCCCCCCCCEEEECEEEEECCCCCCCEEECCCCCCCCCCCEEEEE
KSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKR
ECCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCHHHHH
AQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKGV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCH
KDVVTQPQA
HHHHCCCCC
>Mature Secondary Structure
MLSRWRYSWRILDDNEAQKMKKTAIAIAVALAGFATVAQAAPKDNTWYAGAKLGWSQYHD
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHCC
TGFINNDGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGDNINGAYKAQGVQLT
CCCCCCCCCCCCCCCCCCCCCCEEECCEEEHCCCHHHHCCCCCCCCCCCCEEEECCEEEE
AKLGYPITDDLDVYTRLGGMVWRADTKSNVPGGASTKDHDTGVSPVFAGGIEYAITPEIA
EEECCCCCCCHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECHHHH
TRLEYQWTNNIGDANTIGTRPDNGLLSVGVSYRFGQQEAAPVVAPAPAPAPEVQTKHFTL
HEEEEEECCCCCCCCCCCCCCCCCEEEECEEEEECCCCCCCEEECCCCCCCCCCCEEEEE
KSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKR
ECCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCHHHHH
AQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKGV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCH
KDVVTQPQA
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1955870 [H]