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The map label for this gene is pqaA

Identifier: 194735348

GI number: 194735348

Start: 1587231

End: 1588721

Strand: Reverse

Name: pqaA

Synonym: SeSA_A1648

Alternate gene names: NA

Gene position: 1588721-1587231 (Counterclockwise)

Preceding gene: 194736011

Following gene: 194735475

Centisome position: 33.74

GC content: 41.99

Gene sequence:

>1491_bases
ATGAAAAAAATATATCTCGTTGTTATCGTACTGTTTTTTATTTCTACAAAAGTTTATACACTACTTCATAACAACATCTT
CTTTTGTCGAAACAGCCCGGAGTGTGATTTGTCTCATGTTCTCCCCGACTACCGGGAGAAGATTTCAGGCACACCGCTAA
AATATACCTTGATTAGTACAGCTCCATTAGCACAGGTGGTAGTCAGACACTATGAATTATTATCGCAACACTGGTCGCCA
GATGACATGGTAACCCCTGCGCAATGGCGACATAACGTTGATATTTATATCCCTGAAACGGCAAAAGAGCACCATGCTTT
GGTGGTTGTAAACAACGGAATTAATTATGATAAAGGCGTACAAATCACTGGTAAACCCGGTGATTTCCCCCAGGAAACAC
TGGCAAGCATCGCCCGTGATACGAATACCATCGTAATATCAGTGAGTGATATACCTAACCAATATTTAACCTTTCAGGAT
GATAAAAAACCACTGAAAGAGGACGAGAGCGTTTCCCGAAGCTGGGCATTATTTATGGAAGCGCCGGAGCAACGTGAGTT
AATGCCCTTAAATATTCCTATGGTCACTGCCCTATCGCAAGCGATGAGATTAGCAAAAAAGGAGTTAACGCAATGGAATA
TAAATTCCTTTATCATTACAGGTATTTCAAAGCGTGGGTGGACCACCTGGTTGTCAGCTATTGCCGATCCTGATGTTGAA
GCAATTGTTCCCTTCGCCATTGATCTACTTGATATTGATGCTTCACTTGAGCATATTTATCAATCATACGGTGGAAATTG
GCCCATTACATTCTACCCCTACTACCAGCAAGGCATAGATGAGAAAATAAAATCCCCCACATTTACCCAGCTAAGGCAAA
TAATAGATCCGTTAAGATATCTCAACACTATTTATCAACCCCGCCTTGCAATACCGAAATATATTATTAATGCAAGCGGC
GATGATTTTTTCGTACCAGACAATACTCGCTTTTATTATAGCAAACTCCCTGGCGTAAAATCATTACGTATAGTGCCTAA
TATGAACCACTACTCAATTAACCAGTTCGCTGAAGAAAGCCTCGTTCCATTTATTAATAGGTTTCAAAGTAAAAAAACAT
TACCACAGTTGATCGGCCTTATTCACCACCATCTTCTTACGGTCTATTTCTCAGAAGCGCCGGTAAAAGTCGTTCGCTGG
ACAGCCAACAATCCAAATGCGCGTGATTTCCGTTATGCCTGTGGCATCCGCTATCAGCCGCTTACAATAGATATTCCCGC
CAACAATAAGATCAGTATTACGTTAAATGAACCGAAGACAGGTTGGGAAGCTACCTATATCGAAGCCACTTTTAATGATG
GCTATGTCGCCACGAGTCAGGTTTATATTACGCCCGATGAAAAATACCCACAGACAGCGCCACCTTCTGTTAACGCCGCA
TGTCAAACGTTACCGGGGCGTGGATTAGGGGAAAACGATAGCCCCGATTGA

Upstream 100 bases:

>100_bases
CCCTTATTTATCAAAAGTATTGTACTTATATTGAATGTTTAAGAGGTATTTATGGAAATTATGCTGGTTGGCATTTGCCC
TTGTAAAGCGCGGGGAAAGC

Downstream 100 bases:

>100_bases
ATTTTCAAGTAATTATCTGATTTTAAAGAATTTTATCCATCACGCTTGCGATGGATAAAAATCCTCTGCGATAAATTTTT
GTTATATTGATCACGTTCTA

Product: PqaA protein

Products: NA

Alternate protein names: Phopq-Activated Pathogenicity-Related Protein Pqaa Type; Transmembrane Protein; PhoPQ-Activated Pathogenicity-Related Protein; PhoPQ-Activated Pathogenicity-Like Protein PqaA Type; PhoPQ-Activated Pathogenicity-Related Protein PqaA Type; PhoPQ-Regulated Protein; Secreted Protein; PhoPQ-Activated Pathogenicity-Like Protein

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MKKIYLVVIVLFFISTKVYTLLHNNIFFCRNSPECDLSHVLPDYREKISGTPLKYTLISTAPLAQVVVRHYELLSQHWSP
DDMVTPAQWRHNVDIYIPETAKEHHALVVVNNGINYDKGVQITGKPGDFPQETLASIARDTNTIVISVSDIPNQYLTFQD
DKKPLKEDESVSRSWALFMEAPEQRELMPLNIPMVTALSQAMRLAKKELTQWNINSFIITGISKRGWTTWLSAIADPDVE
AIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQQGIDEKIKSPTFTQLRQIIDPLRYLNTIYQPRLAIPKYIINASG
DDFFVPDNTRFYYSKLPGVKSLRIVPNMNHYSINQFAEESLVPFINRFQSKKTLPQLIGLIHHHLLTVYFSEAPVKVVRW
TANNPNARDFRYACGIRYQPLTIDIPANNKISITLNEPKTGWEATYIEATFNDGYVATSQVYITPDEKYPQTAPPSVNAA
CQTLPGRGLGENDSPD

Sequences:

>Translated_496_residues
MKKIYLVVIVLFFISTKVYTLLHNNIFFCRNSPECDLSHVLPDYREKISGTPLKYTLISTAPLAQVVVRHYELLSQHWSP
DDMVTPAQWRHNVDIYIPETAKEHHALVVVNNGINYDKGVQITGKPGDFPQETLASIARDTNTIVISVSDIPNQYLTFQD
DKKPLKEDESVSRSWALFMEAPEQRELMPLNIPMVTALSQAMRLAKKELTQWNINSFIITGISKRGWTTWLSAIADPDVE
AIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQQGIDEKIKSPTFTQLRQIIDPLRYLNTIYQPRLAIPKYIINASG
DDFFVPDNTRFYYSKLPGVKSLRIVPNMNHYSINQFAEESLVPFINRFQSKKTLPQLIGLIHHHLLTVYFSEAPVKVVRW
TANNPNARDFRYACGIRYQPLTIDIPANNKISITLNEPKTGWEATYIEATFNDGYVATSQVYITPDEKYPQTAPPSVNAA
CQTLPGRGLGENDSPD
>Mature_496_residues
MKKIYLVVIVLFFISTKVYTLLHNNIFFCRNSPECDLSHVLPDYREKISGTPLKYTLISTAPLAQVVVRHYELLSQHWSP
DDMVTPAQWRHNVDIYIPETAKEHHALVVVNNGINYDKGVQITGKPGDFPQETLASIARDTNTIVISVSDIPNQYLTFQD
DKKPLKEDESVSRSWALFMEAPEQRELMPLNIPMVTALSQAMRLAKKELTQWNINSFIITGISKRGWTTWLSAIADPDVE
AIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQQGIDEKIKSPTFTQLRQIIDPLRYLNTIYQPRLAIPKYIINASG
DDFFVPDNTRFYYSKLPGVKSLRIVPNMNHYSINQFAEESLVPFINRFQSKKTLPQLIGLIHHHLLTVYFSEAPVKVVRW
TANNPNARDFRYACGIRYQPLTIDIPANNKISITLNEPKTGWEATYIEATFNDGYVATSQVYITPDEKYPQTAPPSVNAA
CQTLPGRGLGENDSPD

Specific function: Unknown

COG id: COG4287

COG function: function code R; PhoPQ-activated pathogenicity-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56553; Mature: 56553

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIYLVVIVLFFISTKVYTLLHNNIFFCRNSPECDLSHVLPDYREKISGTPLKYTLIST
CCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHCCHHHHHHHCCCCEEEEEECC
APLAQVVVRHYELLSQHWSPDDMVTPAQWRHNVDIYIPETAKEHHALVVVNNGINYDKGV
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCE
QITGKPGDFPQETLASIARDTNTIVISVSDIPNQYLTFQDDKKPLKEDESVSRSWALFME
EEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCEEECCCCCCCCCCHHHHHEEEEEEC
APEQRELMPLNIPMVTALSQAMRLAKKELTQWNINSFIITGISKRGWTTWLSAIADPDVE
CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCHH
AIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQQGIDEKIKSPTFTQLRQIIDPLRY
EEHHHEEEEEECCHHHHHHHHHHCCCCCEEEECHHHHCHHHHHCCCCHHHHHHHHHHHHH
LNTIYQPRLAIPKYIINASGDDFFVPDNTRFYYSKLPGVKSLRIVPNMNHYSINQFAEES
HHHHHCCCCCCCCEEEECCCCEEECCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHH
LVPFINRFQSKKTLPQLIGLIHHHLLTVYFSEAPVKVVRWTANNPNARDFRYACGIRYQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCEEEECCCEECC
LTIDIPANNKISITLNEPKTGWEATYIEATFNDGYVATSQVYITPDEKYPQTAPPSVNAA
EEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCHH
CQTLPGRGLGENDSPD
HHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKIYLVVIVLFFISTKVYTLLHNNIFFCRNSPECDLSHVLPDYREKISGTPLKYTLIST
CCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHCCHHHHHHHCCCCEEEEEECC
APLAQVVVRHYELLSQHWSPDDMVTPAQWRHNVDIYIPETAKEHHALVVVNNGINYDKGV
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCE
QITGKPGDFPQETLASIARDTNTIVISVSDIPNQYLTFQDDKKPLKEDESVSRSWALFME
EEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCEEECCCCCCCCCCHHHHHEEEEEEC
APEQRELMPLNIPMVTALSQAMRLAKKELTQWNINSFIITGISKRGWTTWLSAIADPDVE
CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCHH
AIVPFAIDLLDIDASLEHIYQSYGGNWPITFYPYYQQGIDEKIKSPTFTQLRQIIDPLRY
EEHHHEEEEEECCHHHHHHHHHHCCCCCEEEECHHHHCHHHHHCCCCHHHHHHHHHHHHH
LNTIYQPRLAIPKYIINASGDDFFVPDNTRFYYSKLPGVKSLRIVPNMNHYSINQFAEES
HHHHHCCCCCCCCEEEECCCCEEECCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHH
LVPFINRFQSKKTLPQLIGLIHHHLLTVYFSEAPVKVVRWTANNPNARDFRYACGIRYQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCEEEECCCEECC
LTIDIPANNKISITLNEPKTGWEATYIEATFNDGYVATSQVYITPDEKYPQTAPPSVNAA
EEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCHH
CQTLPGRGLGENDSPD
HHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA