| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is rfbP [H]
Identifier: 194734817
GI number: 194734817
Start: 2180209
End: 2181639
Strand: Reverse
Name: rfbP [H]
Synonym: SeSA_A2310
Alternate gene names: 194734817
Gene position: 2181639-2180209 (Counterclockwise)
Preceding gene: 194737984
Following gene: 194737009
Centisome position: 46.33
GC content: 36.76
Gene sequence:
>1431_bases ATGGATAATATTGATAATAAGTATAATCCACAGCTATGTAAAATTTTTTTGGCTATATCGGATTTGATTTTTTTTAATTT AGCCTTATGGTTTTCATTAGGATGTGTCTATTTTATTTTTGATCAAGTACAGCGATTTATTCCTCAAGACCAATTAGATA CAAGAGTTATTACACATTTTATTTTGTCAGTAGTATGTGTCGGTTGGTTTTGGATTCGTTTGCGACATTATACATACCGC AAGCCATTTTGGTATGAGTTAAAAGAAATTTTTCGTACGATCGTTATTTTTGCTATATTTGATTTGGCTCTGATAGCGTT TACAAAATGGCAGTTTTCACGCTATGTCTGGGTGTTTTGTTGGACTTTTGCTATAATCCTGGTGCCTTTTTTTCGCGCAC TTACAAAGCATTTATTGAACAAGCTAGGTATCTGGAAGAAAAAAACTATCATCCTGGGGAGCGGACAGAATGCTCGTGGT GCATATTCTGCGCTGCAAAGTGAGGAGATGATGGGGTTTGATGTTATCGCTTTTTTTGATACGGATGCGTCAGATGCTGA AATAAATATGTTGCCGGTGATAAAGGATACTGAGATTATTTGGGATTTAAATCGTACAGGTGATGTCCATTATATCCTTG CTTATGAATACACCGAGTTGGAGAAAACACATTTTTGGCTACGTGAACTTTCAAAACATCATTGTCGTTCTGTTACTGTA GTCCCCTCGTTTAGAGGATTGCCATTATATAATACTGATATGTCTTTTATCTTTAGCCATGAAGTTATGTTATTAAGGAT ACAAAATAACTTGGCTAAAAGGTCGTCCCGTTTTCTCAAAAGGACATTTGATATTGTTTGTTCAATAATGATTCTTATAA TTGCATCACCACTTATGATTTATCTGTGGTATAAAGTTACTCGAGATGGTGGTCCGGCTATTTATGGTCATCAGCGAGTA GGTCGGCATGGAAAACTTTTTCCATGCTACAAATTTCGTTCTATGGTTATGAATTCTCAAGAGGTACTAAAAGAACTTTT GGCTAACGATCCTATTGCCAGGGCTGAATGGGAAAAAGATTTTAAACTGAAAAATGATCCTCGAATCACAGCTGTAGGTC GATTTATACGTAAAACTAGCCTTGATGAGTTGCCACAACTTTTTAATGTACTAAAAGGTGATATGAGCCTGGTTGGACCA CGACCTATCGTTTCGGATGAACTGGAGCGTTATTGTGATGATGTTGATTATTATTTGATGGCAAAGCCGGGCATGACAGG TCTATGGCAAGTGAGTGGGCGTAATGATGTTGATTATGACACCCGTGTTTATTTTGATTCCTGGTATGTTAAAAACTGGA CGCTTTGGAATGATATTGCCATTCTGTTTAAAACAGCGAAAGTTGTTTTGCGGCGAGATGGTGCGTATTAA
Upstream 100 bases:
>100_bases CTAATATTAAAAAACGATGCTTGCCGTAAAAGAATTGAATGTTATTTACTTAATATGCCTATTTTATTTACATTATGCAC GGTCAGAGGGTGAGGATTAA
Downstream 100 bases:
>100_bases GCTTAACGAGAAGTACTGAATAATAATTGTATAAAATAGCCTGCGTAAAATCTGAACGCATCAATCGCTACCTTAATATC ATATCTTTGAGTTAACATAC
Product: undecaprenyl-phosphate galactose phosphotransferase
Products: NA
Alternate protein names: Galactosyl-P-P-undecaprenol synthase [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MDNIDNKYNPQLCKIFLAISDLIFFNLALWFSLGCVYFIFDQVQRFIPQDQLDTRVITHFILSVVCVGWFWIRLRHYTYR KPFWYELKEIFRTIVIFAIFDLALIAFTKWQFSRYVWVFCWTFAIILVPFFRALTKHLLNKLGIWKKKTIILGSGQNARG AYSALQSEEMMGFDVIAFFDTDASDAEINMLPVIKDTEIIWDLNRTGDVHYILAYEYTELEKTHFWLRELSKHHCRSVTV VPSFRGLPLYNTDMSFIFSHEVMLLRIQNNLAKRSSRFLKRTFDIVCSIMILIIASPLMIYLWYKVTRDGGPAIYGHQRV GRHGKLFPCYKFRSMVMNSQEVLKELLANDPIARAEWEKDFKLKNDPRITAVGRFIRKTSLDELPQLFNVLKGDMSLVGP RPIVSDELERYCDDVDYYLMAKPGMTGLWQVSGRNDVDYDTRVYFDSWYVKNWTLWNDIAILFKTAKVVLRRDGAY
Sequences:
>Translated_476_residues MDNIDNKYNPQLCKIFLAISDLIFFNLALWFSLGCVYFIFDQVQRFIPQDQLDTRVITHFILSVVCVGWFWIRLRHYTYR KPFWYELKEIFRTIVIFAIFDLALIAFTKWQFSRYVWVFCWTFAIILVPFFRALTKHLLNKLGIWKKKTIILGSGQNARG AYSALQSEEMMGFDVIAFFDTDASDAEINMLPVIKDTEIIWDLNRTGDVHYILAYEYTELEKTHFWLRELSKHHCRSVTV VPSFRGLPLYNTDMSFIFSHEVMLLRIQNNLAKRSSRFLKRTFDIVCSIMILIIASPLMIYLWYKVTRDGGPAIYGHQRV GRHGKLFPCYKFRSMVMNSQEVLKELLANDPIARAEWEKDFKLKNDPRITAVGRFIRKTSLDELPQLFNVLKGDMSLVGP RPIVSDELERYCDDVDYYLMAKPGMTGLWQVSGRNDVDYDTRVYFDSWYVKNWTLWNDIAILFKTAKVVLRRDGAY >Mature_476_residues MDNIDNKYNPQLCKIFLAISDLIFFNLALWFSLGCVYFIFDQVQRFIPQDQLDTRVITHFILSVVCVGWFWIRLRHYTYR KPFWYELKEIFRTIVIFAIFDLALIAFTKWQFSRYVWVFCWTFAIILVPFFRALTKHLLNKLGIWKKKTIILGSGQNARG AYSALQSEEMMGFDVIAFFDTDASDAEINMLPVIKDTEIIWDLNRTGDVHYILAYEYTELEKTHFWLRELSKHHCRSVTV VPSFRGLPLYNTDMSFIFSHEVMLLRIQNNLAKRSSRFLKRTFDIVCSIMILIIASPLMIYLWYKVTRDGGPAIYGHQRV GRHGKLFPCYKFRSMVMNSQEVLKELLANDPIARAEWEKDFKLKNDPRITAVGRFIRKTSLDELPQLFNVLKGDMSLVGP RPIVSDELERYCDDVDYYLMAKPGMTGLWQVSGRNDVDYDTRVYFDSWYVKNWTLWNDIAILFKTAKVVLRRDGAY
Specific function: Is responsible for transferring galactose-1-phosphate to the lipid precursor undecaprenol phosphate in the first steps of O-polysaccharide biosynthesis [H]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=400, Percent_Identity=27, Blast_Score=137, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017472 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: =2.7.8.6 [H]
Molecular weight: Translated: 56198; Mature: 56198
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNIDNKYNPQLCKIFLAISDLIFFNLALWFSLGCVYFIFDQVQRFIPQDQLDTRVITHF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ILSVVCVGWFWIRLRHYTYRKPFWYELKEIFRTIVIFAIFDLALIAFTKWQFSRYVWVFC HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WTFAIILVPFFRALTKHLLNKLGIWKKKTIILGSGQNARGAYSALQSEEMMGFDVIAFFD HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEC TDASDAEINMLPVIKDTEIIWDLNRTGDVHYILAYEYTELEKTHFWLRELSKHHCRSVTV CCCCCCEEEEEEEEECCEEEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCEEEE VPSFRGLPLYNTDMSFIFSHEVMLLRIQNNLAKRSSRFLKRTFDIVCSIMILIIASPLMI ECCCCCCEEECCCHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLWYKVTRDGGPAIYGHQRVGRHGKLFPCYKFRSMVMNSQEVLKELLANDPIARAEWEKD HHHHHEECCCCCEEECCHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHCCCCC FKLKNDPRITAVGRFIRKTSLDELPQLFNVLKGDMSLVGPRPIVSDELERYCDDVDYYLM CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHCCCCEEEE AKPGMTGLWQVSGRNDVDYDTRVYFDSWYVKNWTLWNDIAILFKTAKVVLRRDGAY ECCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDNIDNKYNPQLCKIFLAISDLIFFNLALWFSLGCVYFIFDQVQRFIPQDQLDTRVITHF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ILSVVCVGWFWIRLRHYTYRKPFWYELKEIFRTIVIFAIFDLALIAFTKWQFSRYVWVFC HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WTFAIILVPFFRALTKHLLNKLGIWKKKTIILGSGQNARGAYSALQSEEMMGFDVIAFFD HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEC TDASDAEINMLPVIKDTEIIWDLNRTGDVHYILAYEYTELEKTHFWLRELSKHHCRSVTV CCCCCCEEEEEEEEECCEEEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCEEEE VPSFRGLPLYNTDMSFIFSHEVMLLRIQNNLAKRSSRFLKRTFDIVCSIMILIIASPLMI ECCCCCCEEECCCHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLWYKVTRDGGPAIYGHQRVGRHGKLFPCYKFRSMVMNSQEVLKELLANDPIARAEWEKD HHHHHEECCCCCEEECCHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHCCCCC FKLKNDPRITAVGRFIRKTSLDELPQLFNVLKGDMSLVGPRPIVSDELERYCDDVDYYLM CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHCCCCEEEE AKPGMTGLWQVSGRNDVDYDTRVYFDSWYVKNWTLWNDIAILFKTAKVVLRRDGAY ECCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1710759; 11677609 [H]