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The map label for this gene is abrB [H]

Identifier: 194734580

GI number: 194734580

Start: 860520

End: 861566

Strand: Reverse

Name: abrB [H]

Synonym: SeSA_A0886

Alternate gene names: 194734580

Gene position: 861566-860520 (Counterclockwise)

Preceding gene: 194738356

Following gene: 194736313

Centisome position: 18.3

GC content: 56.35

Gene sequence:

>1047_bases
ATGCCGATTCTGCAGTGGTTTTTGTTGTTCCTGTTATCGCTGCTCATTTCCCTTATTTTTCTCTATCTGCACCTTCCGGC
GGCGATGCTGCTCGGTCCAATGATTGCGGGTATCGTGTTGAGTTTGCGAGGTAGTACGCTACAACTTCCGCGCGGTATTT
TTCTCGCCGCACAGGCGATTCTCGGCTGTATGATCGCCCAAAATCTAACCGGTTCGATATTGACCACCCTCGCCCTCTAC
TGGCCGGTCGTGCTTTTAGTGTTGCTGGTGACGCTGCTTTCCAGCGCGATAGTCGGCTGGCTGCTGGTACGCTACAGCTC
GCTGCCCGGCAACACCGGCGCATGGGGGTCATCGCCGGGCGGCGCAGCGGCAATGGTAGCGATGGCGCAAGATTACGGGG
CGGATATCCGCCTGGTGGCGTTTATGCAGTATCTACGGGTACTGTTTGTGGCTGGCGCGGCGGTGCTGGTGACACGCCTG
ATACTCGGCGACAGCGCGGCAGCGGTCAGCCAACAGGTGATCTGGTTTCCGCCGCTTAGCGGTAATTTATTGACGACGCT
GCTATTAGCGATCGTGGCGGGCATTGCCGGTCGCCTGATGCGTATCCCTTCCGGCACGATGCTGCTCCCCATGTTGGCAG
GCGCGCTTCTCCATTCGCAAGGCATCATTGAGATTGAATTACCCGAATGGCTGCTGGCCGTGGCGTATATGGCGATAGGC
TGGCGTATTGGGCTGGGTTTTGACAGACAGGTGTTTTTTATGGCGCTGCGGCCATTGCCGCAAATCTTATTGTCAATTTT
CGCGCTGATGGCGATTTGCGCCGCGATGGCGTGGGGAATGGCTTACTACATGCAGATTGATTTTATGACGGCTTATCTCG
CCACCAGTCCCGGTGGTCTGGATACGGTTGCCGCGATCGCGGCAGGAAGCAGTGCCGATATGGCGCTCATCATGGCAATG
CAAACCCTACGACTGTTCAGCATTCTGTTAACTGGGCCAGCAGTGGCCCGTTTTATATCAACCTATGCGCCCAGACAACC
TTTGTAG

Upstream 100 bases:

>100_bases
TTACATTTTCCCTTTTTTCTTATCCTCATTATTTTATTCTTACCCCGTTACTCTCTATGATTAATTAAGGTTTCGCTAAA
TATCATTCAGGGAGCATGGA

Downstream 100 bases:

>100_bases
GACTGATAAGCGTCGCGCCATCAGACAATAGCCGCTCGCCGATGGCGGTTCCGGCTATTTCTGGCAATGCGGGCACCAGT
AAAACGGTCGTGAGGAAAGT

Product: protein AbrB

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MPILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAILGCMIAQNLTGSILTTLALY
WPVVLLVLLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRL
ILGDSAAAVSQQVIWFPPLSGNLLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIG
WRIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGLDTVAAIAAGSSADMALIMAM
QTLRLFSILLTGPAVARFISTYAPRQPL

Sequences:

>Translated_348_residues
MPILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAILGCMIAQNLTGSILTTLALY
WPVVLLVLLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRL
ILGDSAAAVSQQVIWFPPLSGNLLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIG
WRIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGLDTVAAIAAGSSADMALIMAM
QTLRLFSILLTGPAVARFISTYAPRQPL
>Mature_347_residues
PILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAILGCMIAQNLTGSILTTLALYW
PVVLLVLLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRLI
LGDSAAAVSQQVIWFPPLSGNLLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIGW
RIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGLDTVAAIAAGSSADMALIMAMQ
TLRLFSILLTGPAVARFISTYAPRQPL

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=346, Percent_Identity=81.2138728323699, Blast_Score=534, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 37157; Mature: 37025

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS00099 THIOLASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LGCMIAQNLTGSILTTLALYWPVVLLVLLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRLILGDSAAAVSQQVIWFPPLS
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCC
GNLLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIG
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHH
WRIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DTVAAIAAGSSADMALIMAMQTLRLFSILLTGPAVARFISTYAPRQPL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LGCMIAQNLTGSILTTLALYWPVVLLVLLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRLILGDSAAAVSQQVIWFPPLS
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCC
GNLLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIG
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHH
WRIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DTVAAIAAGSSADMALIMAMQTLRLFSILLTGPAVARFISTYAPRQPL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]