Click here to switch to the map view.

The map label for this gene is 194734572

Identifier: 194734572

GI number: 194734572

Start: 2146016

End: 2146510

Strand: Reverse

Name: 194734572

Synonym: SeSA_A2268

Alternate gene names: NA

Gene position: 2146510-2146016 (Counterclockwise)

Preceding gene: 194734982

Following gene: 194736431

Centisome position: 45.58

GC content: 58.79

Gene sequence:

>495_bases
ATGGCTGGAACGGCGGGGCGTTCCGGGCGTCGCCCCAAGCCAACGGCGCGCAAGGCGCTGGCCGGAAACCCCGGCAAGCG
AGCCCTGAACAAAGATGAACCTGTTTTTACGCCCATCAAAGGTGTTGAGCCACCGGAGTGGTTCGCTGAAGAAGATCTCC
CTCTCGCCACGATCATGTGGCAACTGACAACCAAAGAACTCTGCGGTCAGGGCCTGCTGTGCGTGACTGACCTGGCGGTA
CTTGAGCGGTGGTGCGTGGCCTATGAGTTCTGGCGACGTGCCGTGAAAAATATTGCCATACAGGGCAACACCATCACCGG
TGCAATGGGCGGCATGGTCAAAAATCCGGAGCTGACCGCCAAAAAAGAACAGGAGTCCGAGATGAGCAGCACGGGTGCAA
TGCTCGGACTCGACCCCAGCAGCCGCCAGCGTCTGATTGGCCTGGCGGGGCAGAAGAAAGCCACTAACCCGTTTCTGAAA
ATCATCGAGTCATGA

Upstream 100 bases:

>100_bases
AGGGGCGGGTCAAATCCCTGTGACCTGACGTCTTCCGGACTGCCCGCCTCAACGTTTTTTTATACCCGCGAAAAATGAAA
TTTAACCAGGAGTGCCGCAT

Downstream 100 bases:

>100_bases
GCCGGAAATCTTACCCCAACGTAAATGCTGCCAATCAGTATGCCCGTGATGTCGTGCGCGGAAAGATTGTGGCCTGCCAG
TTTGTGATTCAGGCCTGCCA

Product: putative phage terminase, small subunit, P27 family protein

Products: NA

Alternate protein names: Phage Terminase Small Subunit; Small Terminase Subunit; Terminase Small Subunit; Phage Terminasesmall Subunit

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MAGTAGRSGRRPKPTARKALAGNPGKRALNKDEPVFTPIKGVEPPEWFAEEDLPLATIMWQLTTKELCGQGLLCVTDLAV
LERWCVAYEFWRRAVKNIAIQGNTITGAMGGMVKNPELTAKKEQESEMSSTGAMLGLDPSSRQRLIGLAGQKKATNPFLK
IIES

Sequences:

>Translated_164_residues
MAGTAGRSGRRPKPTARKALAGNPGKRALNKDEPVFTPIKGVEPPEWFAEEDLPLATIMWQLTTKELCGQGLLCVTDLAV
LERWCVAYEFWRRAVKNIAIQGNTITGAMGGMVKNPELTAKKEQESEMSSTGAMLGLDPSSRQRLIGLAGQKKATNPFLK
IIES
>Mature_163_residues
AGTAGRSGRRPKPTARKALAGNPGKRALNKDEPVFTPIKGVEPPEWFAEEDLPLATIMWQLTTKELCGQGLLCVTDLAVL
ERWCVAYEFWRRAVKNIAIQGNTITGAMGGMVKNPELTAKKEQESEMSSTGAMLGLDPSSRQRLIGLAGQKKATNPFLKI
IES

Specific function: Unknown

COG id: COG3747

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17854; Mature: 17723

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTAGRSGRRPKPTARKALAGNPGKRALNKDEPVFTPIKGVEPPEWFAEEDLPLATIMW
CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
QLTTKELCGQGLLCVTDLAVLERWCVAYEFWRRAVKNIAIQGNTITGAMGGMVKNPELTA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHCCCCCCCCCCCC
KKEQESEMSSTGAMLGLDPSSRQRLIGLAGQKKATNPFLKIIES
CHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCCCCHHHHHHCC
>Mature Secondary Structure 
AGTAGRSGRRPKPTARKALAGNPGKRALNKDEPVFTPIKGVEPPEWFAEEDLPLATIMW
CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
QLTTKELCGQGLLCVTDLAVLERWCVAYEFWRRAVKNIAIQGNTITGAMGGMVKNPELTA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHCCCCCCCCCCCC
KKEQESEMSSTGAMLGLDPSSRQRLIGLAGQKKATNPFLKIIES
CHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA