Click here to switch to the map view.

The map label for this gene is 194734982

Identifier: 194734982

GI number: 194734982

Start: 2146636

End: 2146986

Strand: Reverse

Name: 194734982

Synonym: SeSA_A2269

Alternate gene names: NA

Gene position: 2146986-2146636 (Counterclockwise)

Preceding gene: 194737997

Following gene: 194734572

Centisome position: 45.59

GC content: 55.84

Gene sequence:

>351_bases
ATGCCCCCTAGAATCCCAAAAGCCTGCCGCGTTCGTGGTTGCCGCCAAACTACCACTGATCCGTCAGGCTATTGTGAAAG
TCACAAAAGCGAAGGCTGGAAGCAATACAAGCCAGGACAATCCCGTCATCAGCGCGGCTACGGTTCGAAGTGGGACAGTA
TCCGCGCGCGTGTCCTGAAGCGTGACAAAGGCCTGTGTCAGTTATGTCTGCGTGCCGGTGTGGTGCGTGAGGCGAAAACC
GTTGACCACATTATTCCTAAAGCGCATGGCGGCACTGATGCTGACTGCAATCTGCAGAGTCTGTGCTGGCCGTGTCATAA
GGCGAAGACGGCCCGTGAACGGCTGAAGTAA

Upstream 100 bases:

>100_bases
AAATGCTTGATAAGCTCATCTCTTCTAGATTTGTATTTGAGTCAAGGTAATTGCCTTTGAGCATTTTTCTTTATTATTTT
ACTTATTATAAATTTTTTAT

Downstream 100 bases:

>100_bases
GAACCAGTTCCCGCTGCCAGAGGGGAGGGGCGGGTCAAATCCCTGTGACCTGACGTCTTCCGGACTGCCCGCCTCAACGT
TTTTTTATACCCGCGAAAAA

Product: HnhC

Products: NA

Alternate protein names: HNH Endonuclease Domain Protein; Phage HNH Endonuclease; HNH Endonuclease Domain-Containing Protein; Restriction Endonuclease; Phage Associated Protein; Phage-Related Protein; Gp82 Phage Protein; Phage Protein; Phage Endonuclease; Phage Holin; Endonuclease

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MPPRIPKACRVRGCRQTTTDPSGYCESHKSEGWKQYKPGQSRHQRGYGSKWDSIRARVLKRDKGLCQLCLRAGVVREAKT
VDHIIPKAHGGTDADCNLQSLCWPCHKAKTARERLK

Sequences:

>Translated_116_residues
MPPRIPKACRVRGCRQTTTDPSGYCESHKSEGWKQYKPGQSRHQRGYGSKWDSIRARVLKRDKGLCQLCLRAGVVREAKT
VDHIIPKAHGGTDADCNLQSLCWPCHKAKTARERLK
>Mature_115_residues
PPRIPKACRVRGCRQTTTDPSGYCESHKSEGWKQYKPGQSRHQRGYGSKWDSIRARVLKRDKGLCQLCLRAGVVREAKTV
DHIIPKAHGGTDADCNLQSLCWPCHKAKTARERLK

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13142; Mature: 13011

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
7.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPRIPKACRVRGCRQTTTDPSGYCESHKSEGWKQYKPGQSRHQRGYGSKWDSIRARVLK
CCCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHH
RDKGLCQLCLRAGVVREAKTVDHIIPKAHGGTDADCNLQSLCWPCHKAKTARERLK
HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PPRIPKACRVRGCRQTTTDPSGYCESHKSEGWKQYKPGQSRHQRGYGSKWDSIRARVLK
CCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHH
RDKGLCQLCLRAGVVREAKTVDHIIPKAHGGTDADCNLQSLCWPCHKAKTARERLK
HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA