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The map label for this gene is yaeB [H]

Identifier: 194734251

GI number: 194734251

Start: 286715

End: 287455

Strand: Reverse

Name: yaeB [H]

Synonym: SeSA_A0270

Alternate gene names: 194734251

Gene position: 287455-286715 (Counterclockwise)

Preceding gene: 194734051

Following gene: 194735941

Centisome position: 6.1

GC content: 55.74

Gene sequence:

>741_bases
TTGTATCGGGTCCGCCCTGAATATTTCGGCGAAATGAGCAGCTTTCAGTTTGAACAAATCGGCGTTATTCGCTCCCCCTA
TAAAGAAAAATTCGCCGTTCCGCGCCAGCCCGGTCTGGTCAAAAGCGCCTGCGGCGAACTGCATCTGATAGCGCCTTACA
ACCAGGCCGATGCCGTTCGCGGCCTGGAGGCGTTCAGCCATTTGTGGGTGCTTTTCGTTTTTCATCAGACGATGGACGGC
GGCTGGCGGCCAACAGTTCGTCCGCCCCGTCTTGGCGGTAACGCCAGAATGGGCGTTTTTGCCACGCGCTCCACGTTCCG
CCCCAATCCGATTGGCATGTCGCTCGTTGCGCTAAAAGGTATCGAGTGCCGGAAAGAGAGCGTAATTCTGAAATTAGGCA
GTCTGGATCTGGTGGATGGCACGCCGGTGGTGGATATCAAACCGTATTTACCGTTTGCCGAGGCCTTACCGGACGCCGCC
GCCAGCTATGCGCAACAGGCGCCGATAGCTGAAATGCCCGTGAGTTTTACCGCTGAGGTGGCTCAACAGCTTACGACGCT
GGAAAGGCGTTATCCGCAGCTACGGACATTTATTTGCGATGTGCTGGCGCAAGATCCTCGCCCGGCTTATCGTAAAGGTG
AAGAGACGGGCAAAACCTATGCCGTCTGGCTGCATGATTTTAACGTGCGCTGGCGTGTGGTTAGCACTGGATTTGAAGTG
TTTGCGCTGGAACCACGGTAA

Upstream 100 bases:

>100_bases
AGCGTATGCAGATTAATGCATCTAAAATGAAAGCCAACGCCGTCCTGCTGCACAGCTGTGAAATTACCAGCGGCACGCCA
GGCTGCTATCGTCAGGCGGT

Downstream 100 bases:

>100_bases
TTTCACTCCCTTCTCTTTTGACATCTCTTGCACGCTGGTAAACTAAATCACTTTTTTTGTATCAGGCTCACATTGAGCCT
GTTCGATCGTTCAACTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MYRVRPEYFGEMSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSACGELHLIAPYNQADAVRGLEAFSHLWVLFVFHQTMDG
GWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVALKGIECRKESVILKLGSLDLVDGTPVVDIKPYLPFAEALPDAA
ASYAQQAPIAEMPVSFTAEVAQQLTTLERRYPQLRTFICDVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVVSTGFEV
FALEPR

Sequences:

>Translated_246_residues
MYRVRPEYFGEMSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSACGELHLIAPYNQADAVRGLEAFSHLWVLFVFHQTMDG
GWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVALKGIECRKESVILKLGSLDLVDGTPVVDIKPYLPFAEALPDAA
ASYAQQAPIAEMPVSFTAEVAQQLTTLERRYPQLRTFICDVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVVSTGFEV
FALEPR
>Mature_246_residues
MYRVRPEYFGEMSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSACGELHLIAPYNQADAVRGLEAFSHLWVLFVFHQTMDG
GWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVALKGIECRKESVILKLGSLDLVDGTPVVDIKPYLPFAEALPDAA
ASYAQQAPIAEMPVSFTAEVAQQLTTLERRYPQLRTFICDVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVVSTGFEV
FALEPR

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=142, Percent_Identity=39.4366197183099, Blast_Score=105, Evalue=4e-23,
Organism=Escherichia coli, GI1786393, Length=235, Percent_Identity=89.3617021276596, Blast_Score=436, Evalue=1e-124,
Organism=Drosophila melanogaster, GI24586408, Length=163, Percent_Identity=42.3312883435583, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI45552503, Length=142, Percent_Identity=45.0704225352113, Blast_Score=110, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 27710; Mature: 27710

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRVRPEYFGEMSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSACGELHLIAPYNQADAVR
CCCCCHHHHCCCCCCCHHHHCCHHCCHHHHCCCCCCCCHHHHHCCCEEEEECCCHHHHHH
GLEAFSHLWVLFVFHQTMDGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVALKG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECC
IECRKESVILKLGSLDLVDGTPVVDIKPYLPFAEALPDAAASYAQQAPIAEMPVSFTAEV
CCCCCCEEEEEECCEEEECCCCEEEECCCCCHHHHCHHHHHHHHHCCCHHHCCCHHHHHH
AQQLTTLERRYPQLRTFICDVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVVSTGFEV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEEECCEEEEEEECCEEE
FALEPR
EEECCC
>Mature Secondary Structure
MYRVRPEYFGEMSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSACGELHLIAPYNQADAVR
CCCCCHHHHCCCCCCCHHHHCCHHCCHHHHCCCCCCCCHHHHHCCCEEEEECCCHHHHHH
GLEAFSHLWVLFVFHQTMDGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVALKG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECC
IECRKESVILKLGSLDLVDGTPVVDIKPYLPFAEALPDAAASYAQQAPIAEMPVSFTAEV
CCCCCCEEEEEECCEEEECCCCEEEECCCCCHHHHCHHHHHHHHHCCCHHHCCCHHHHHH
AQQLTTLERRYPQLRTFICDVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVVSTGFEV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEEECCEEEEEEECCEEE
FALEPR
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1459951; 9278503 [H]