| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is arnT [H]
Identifier: 194734205
GI number: 194734205
Start: 2414870
End: 2416516
Strand: Direct
Name: arnT [H]
Synonym: SeSA_A2529
Alternate gene names: 194734205
Gene position: 2414870-2416516 (Clockwise)
Preceding gene: 194738251
Following gene: 194737533
Centisome position: 51.28
GC content: 53.92
Gene sequence:
>1647_bases ATGATGAAATCGATACGCTATTATCTGGCTTTCGCCGCGTTTATCGCGCTCTACTATGTTATTCCTGTCAATAGCCGTCT GCTCTGGCAGCCGGATGAAACGCGCTATGCCGAAATAAGTCGGGAGATGCTGGCGTCTGGCGACTGGATCGTGCCGCATT TTCTGGGATTACGTTATTTCGAAAAACCGATAGCCGGTTACTGGATAAACAGTCTGGGTCAGTGGCTTTTTGGCGCTACC AATTTTGGCGTGCGGGCCGGCGCTATTTTAACGACATTGCTGGCCGCAGCGCTGGTGGCGTGGCTGACGTTCCGCTTATG GCGGGATAAACGTACTGCGTTGCTCGCCTCCGTTATATTTCTCTCCCTCTTTGCCGTTTACAGTATCGGGACGTATGCGG TACTCGACCCGATGATCGCCCTTTGGCTTACGGCCGGGATGTGTTGTTTCTGGCAGGGGATGCAGGCCACGACCCGAACG GGCAAGATTGGGATGTTTTTGCTACTGGGTGCAACCTGCGGTCTGGGTGTATTAACTAAAGGCTTCCTCGCCCTGGCCGT ACCGGTAGTGAGCGTGCTGCCGTGGGTCATTGTCCAGAAACGCTGGAAGGACTTTTTGCTTTACGGCTGGCTGGCGGTCT TGAGCTGCTTTGTGGTTGTCCTTCCCTGGGCGATCGCCATTGCGCGACGCGAAGCCGATTTCTGGCATTACTTTTTCTGG GTGGAGCATATCCAGCGATTCGCCATGAGCGATGCCCAGCATAAAGCCCCTTTCTGGTACTATCTGCCGGTACTGCTCGC GGGAAGTTTACCGTGGCTGGGATTACTGCCTGGCGCGCTTAAACTGGGCTGGCGCGAGCGAAACGGCGCATTCTATTTGC TCGGATGGACGATCATGCCGCTTCTCTTTTTCAGCATTGCGAAAGGGAAACTGCCCACCTATGTTCTTTCCTGTTTCGCA CCGATAGCGATACTCATGGCGCGCTTCGTCCTGCATAACGTAAAAGAAGGCGTCGCCGCGCTACGTGTCAACGGCGGGAT CAACCTGGTGTTCGGGTTAGTCGGGATCGTCGCGGCGTTTGTCGTCTCCTCATGGGGCCCGCTGAAATCGCCGGTGTGGA CGCATATCGAAACCTATAAAGTTTTTTGCGTCTGGGGCGTCTTTACTGTTTGGGCGTTTGTGGGCTGGTATAGCCTCTGT CATAGCCAAAAATACCTATTACCCGCGTTTTGTCCGCTGGGACTGGCGCTGCTGTTCGGCTTTTCCGTCCCCGACAGGGT GATGGAGTCCAAACAGCCCCAGTTTTTTGTCGAAATGACCCAGGCGCCTTTGGCATCAAGCCGCTATATTCTTGTCGACA ACGTGGGCGTCGCCGCCGGGCTGGCCTGGAGTCTGAAACGAGACGATATTATGCTCTACGGACACGCGGGCGAACTCAGG TATGGTCTTAGCTATCCTGATGTGCAGGATAAATTCGTTAAAGCCGACGATTTTAACGCCTGGCTCAACCAGCATCGTCA GGAGGGCATTATTACGCTAGTACTTTCAATAGCCAAAGATGAAGACATCAGCGCTCTTTCCCTTCCCCCTGCGGACAATA TTGATTATCAGGGGCGTCTGGTGTTAATTCAGTATCGGCCTAAATGA
Upstream 100 bases:
>100_bases TGCCGACATCGCCTGAGTCTCTGCCGTTGGGGCAAATTGTACGTGGACACATCCCTGGCCGTGAAGGTTGGCTGGGGTGT CAACAGGCCGCGAGCGCCTC
Downstream 100 bases:
>100_bases TCGGCGTCGTTCTGGTGCTTGCCAGTCTGCTCAGCGTTGGCGGTCAGCTCTGCCAGAAGCAAGCGACACGGCCATTGACG ACAGGCGGACGCCGCCGCCA
Product: 4-amino-4-deoxy-L-arabinose transferase
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MMKSIRYYLAFAAFIALYYVIPVNSRLLWQPDETRYAEISREMLASGDWIVPHFLGLRYFEKPIAGYWINSLGQWLFGAT NFGVRAGAILTTLLAAALVAWLTFRLWRDKRTALLASVIFLSLFAVYSIGTYAVLDPMIALWLTAGMCCFWQGMQATTRT GKIGMFLLLGATCGLGVLTKGFLALAVPVVSVLPWVIVQKRWKDFLLYGWLAVLSCFVVVLPWAIAIARREADFWHYFFW VEHIQRFAMSDAQHKAPFWYYLPVLLAGSLPWLGLLPGALKLGWRERNGAFYLLGWTIMPLLFFSIAKGKLPTYVLSCFA PIAILMARFVLHNVKEGVAALRVNGGINLVFGLVGIVAAFVVSSWGPLKSPVWTHIETYKVFCVWGVFTVWAFVGWYSLC HSQKYLLPAFCPLGLALLFGFSVPDRVMESKQPQFFVEMTQAPLASSRYILVDNVGVAAGLAWSLKRDDIMLYGHAGELR YGLSYPDVQDKFVKADDFNAWLNQHRQEGIITLVLSIAKDEDISALSLPPADNIDYQGRLVLIQYRPK
Sequences:
>Translated_548_residues MMKSIRYYLAFAAFIALYYVIPVNSRLLWQPDETRYAEISREMLASGDWIVPHFLGLRYFEKPIAGYWINSLGQWLFGAT NFGVRAGAILTTLLAAALVAWLTFRLWRDKRTALLASVIFLSLFAVYSIGTYAVLDPMIALWLTAGMCCFWQGMQATTRT GKIGMFLLLGATCGLGVLTKGFLALAVPVVSVLPWVIVQKRWKDFLLYGWLAVLSCFVVVLPWAIAIARREADFWHYFFW VEHIQRFAMSDAQHKAPFWYYLPVLLAGSLPWLGLLPGALKLGWRERNGAFYLLGWTIMPLLFFSIAKGKLPTYVLSCFA PIAILMARFVLHNVKEGVAALRVNGGINLVFGLVGIVAAFVVSSWGPLKSPVWTHIETYKVFCVWGVFTVWAFVGWYSLC HSQKYLLPAFCPLGLALLFGFSVPDRVMESKQPQFFVEMTQAPLASSRYILVDNVGVAAGLAWSLKRDDIMLYGHAGELR YGLSYPDVQDKFVKADDFNAWLNQHRQEGIITLVLSIAKDEDISALSLPPADNIDYQGRLVLIQYRPK >Mature_548_residues MMKSIRYYLAFAAFIALYYVIPVNSRLLWQPDETRYAEISREMLASGDWIVPHFLGLRYFEKPIAGYWINSLGQWLFGAT NFGVRAGAILTTLLAAALVAWLTFRLWRDKRTALLASVIFLSLFAVYSIGTYAVLDPMIALWLTAGMCCFWQGMQATTRT GKIGMFLLLGATCGLGVLTKGFLALAVPVVSVLPWVIVQKRWKDFLLYGWLAVLSCFVVVLPWAIAIARREADFWHYFFW VEHIQRFAMSDAQHKAPFWYYLPVLLAGSLPWLGLLPGALKLGWRERNGAFYLLGWTIMPLLFFSIAKGKLPTYVLSCFA PIAILMARFVLHNVKEGVAALRVNGGINLVFGLVGIVAAFVVSSWGPLKSPVWTHIETYKVFCVWGVFTVWAFVGWYSLC HSQKYLLPAFCPLGLALLFGFSVPDRVMESKQPQFFVEMTQAPLASSRYILVDNVGVAAGLAWSLKRDDIMLYGHAGELR YGLSYPDVQDKFVKADDFNAWLNQHRQEGIITLVLSIAKDEDISALSLPPADNIDYQGRLVLIQYRPK
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=550, Percent_Identity=71.0909090909091, Blast_Score=822, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 61806; Mature: 61806
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKSIRYYLAFAAFIALYYVIPVNSRLLWQPDETRYAEISREMLASGDWIVPHFLGLRYF CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH EKPIAGYWINSLGQWLFGATNFGVRAGAILTTLLAAALVAWLTFRLWRDKRTALLASVIF HCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLFAVYSIGTYAVLDPMIALWLTAGMCCFWQGMQATTRTGKIGMFLLLGATCGLGVLTK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHCCHHHHHH GFLALAVPVVSVLPWVIVQKRWKDFLLYGWLAVLSCFVVVLPWAIAIARREADFWHYFFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VEHIQRFAMSDAQHKAPFWYYLPVLLAGSLPWLGLLPGALKLGWRERNGAFYLLGWTIMP HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHCCHHHHCCEEECCCEEEEHHHHHHH LLFFSIAKGKLPTYVLSCFAPIAILMARFVLHNVKEGVAALRVNGGINLVFGLVGIVAAF HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHH VVSSWGPLKSPVWTHIETYKVFCVWGVFTVWAFVGWYSLCHSQKYLLPAFCPLGLALLFG HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC FSVPDRVMESKQPQFFVEMTQAPLASSRYILVDNVGVAAGLAWSLKRDDIMLYGHAGELR CCCCHHHHHCCCCCEEEEEHHCCCCCCCEEEEECCCHHHCCEEEECCCCEEEEECCCCEE YGLSYPDVQDKFVKADDFNAWLNQHRQEGIITLVLSIAKDEDISALSLPPADNIDYQGRL ECCCCCCHHHHHCCCCCHHHHHHHHHHCCHHEEEEEHHCCCCCCEEECCCCCCCCCCCEE VLIQYRPK EEEEECCC >Mature Secondary Structure MMKSIRYYLAFAAFIALYYVIPVNSRLLWQPDETRYAEISREMLASGDWIVPHFLGLRYF CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH EKPIAGYWINSLGQWLFGATNFGVRAGAILTTLLAAALVAWLTFRLWRDKRTALLASVIF HCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLFAVYSIGTYAVLDPMIALWLTAGMCCFWQGMQATTRTGKIGMFLLLGATCGLGVLTK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHCCHHHHHH GFLALAVPVVSVLPWVIVQKRWKDFLLYGWLAVLSCFVVVLPWAIAIARREADFWHYFFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VEHIQRFAMSDAQHKAPFWYYLPVLLAGSLPWLGLLPGALKLGWRERNGAFYLLGWTIMP HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHCCHHHHCCEEECCCEEEEHHHHHHH LLFFSIAKGKLPTYVLSCFAPIAILMARFVLHNVKEGVAALRVNGGINLVFGLVGIVAAF HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHH VVSSWGPLKSPVWTHIETYKVFCVWGVFTVWAFVGWYSLCHSQKYLLPAFCPLGLALLFG HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC FSVPDRVMESKQPQFFVEMTQAPLASSRYILVDNVGVAAGLAWSLKRDDIMLYGHAGELR CCCCHHHHHCCCCCEEEEEHHCCCCCCCEEEEECCCHHHCCEEEECCCCEEEEECCCCEE YGLSYPDVQDKFVKADDFNAWLNQHRQEGIITLVLSIAKDEDISALSLPPADNIDYQGRL ECCCCCCHHHHHCCCCCHHHHHHHHHHCCHHEEEEEHHCCCCCCEEECCCCCCCCCCCEE VLIQYRPK EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA