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The map label for this gene is ygdR [H]

Identifier: 194734006

GI number: 194734006

Start: 1642965

End: 1643153

Strand: Reverse

Name: ygdR [H]

Synonym: SeSA_A1703

Alternate gene names: 194734006

Gene position: 1643153-1642965 (Counterclockwise)

Preceding gene: 194735817

Following gene: 194737832

Centisome position: 34.89

GC content: 46.03

Gene sequence:

>189_bases
ATGATGTTTTTTATGCTTGCGGGTTGCACAACCAACTATGTGATGACGACGAAGAATGGGCAAACGATCGTAACTCAGGG
TAAGCCGCAGTTAGATAAAGAGACGGGGATGACCAGTTATACCGATCAGGAAGGCAACCAGCGGGAAATTAACAGCAATG
ATGTGGCGCAGTTGATTAAGGCTGACTAA

Upstream 100 bases:

>100_bases
CTGATGATTCTGTGAGAATTACACTGCCTTTTTGCTGTAGTTAACTCATTATATTCACGAGGAAAATATGAAAAGGTTAT
TTATATGCTCTGGTTTGGGC

Downstream 100 bases:

>100_bases
GCATTGGGCGCGATGCGGTGTTGGCGGTAACGCGCATTAAACCCGGCAGGCCTGGGGCTGCCGGGGAAGGGTAATGTTAT
GTCGCTGCTTCTTCTTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MMFFMLAGCTTNYVMTTKNGQTIVTQGKPQLDKETGMTSYTDQEGNQREINSNDVAQLIKAD

Sequences:

>Translated_62_residues
MMFFMLAGCTTNYVMTTKNGQTIVTQGKPQLDKETGMTSYTDQEGNQREINSNDVAQLIKAD
>Mature_62_residues
MMFFMLAGCTTNYVMTTKNGQTIVTQGKPQLDKETGMTSYTDQEGNQREINSNDVAQLIKAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygdI [H]

Homologues:

Organism=Escherichia coli, GI1789198, Length=59, Percent_Identity=49.1525423728814, Blast_Score=76, Evalue=5e-16,
Organism=Escherichia coli, GI87082162, Length=63, Percent_Identity=49.2063492063492, Blast_Score=70, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010305 [H]

Pfam domain/function: PF06004 DUF903 [H]

EC number: NA

Molecular weight: Translated: 6910; Mature: 6910

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
8.1 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
8.1 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFFMLAGCTTNYVMTTKNGQTIVTQGKPQLDKETGMTSYTDQEGNQREINSNDVAQLIK
CEEEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
AD
CC
>Mature Secondary Structure
MMFFMLAGCTTNYVMTTKNGQTIVTQGKPQLDKETGMTSYTDQEGNQREINSNDVAQLIK
CEEEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
AD
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]