| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is steA [H]
Identifier: 194737832
GI number: 194737832
Start: 1640250
End: 1640882
Strand: Reverse
Name: steA [H]
Synonym: SeSA_A1701
Alternate gene names: 194737832
Gene position: 1640882-1640250 (Counterclockwise)
Preceding gene: 194734006
Following gene: 194737815
Centisome position: 34.85
GC content: 43.29
Gene sequence:
>633_bases ATGCCATATACATCAGTTTCTACCTATGCCAGAGCTTTATCAGGAAATAAGCTACCTCATGTTGCTGCAGGAGATTATGA AAATAAATTATCAACAAAAATCATGAAAGGCATCTTGTGGGTGCTTACCGCAGGACTGGCCTACGGATTTACAAGAGTAA TTGAACATTGTTGCAATGTTACGCCTAAAGTTGAGGAGTTCTGTGCCAATGCAGGGAATATCCATAATCACCTTGCTGAT GCTGTGTGTGATGGGCTGTATACTATAGATGTCGACCTTTCTGATGGTCGGAGGTTAACATTCGAACAACTCTCGCTGAT GGCTGGACGTGAGCCAATCGTCAGGATATCGGATGGCGAACATACCGTTGAGGTTAAGGGGTCCTTTGAAGATATCTGTA TGAGACTGGAAGAGGGCTTTTTAGAAGCGCCAGCGTACTATAATTATGATATTGATGAAAAATATAAAACCGTCAGAGAG CGAATAGCAGCATATAATGCCTTACCTCAGGCATTAGGCGCCATTCCGAGTTTAAAATATTATACCGATCGGGCCAGCGA CATGCCGGAGGCGAAAGCGCAACGGGCGGCCGACATAAAAGATCGTTACCATAACTATTTGGACAATTATTAA
Upstream 100 bases:
>100_bases AAATATATGCCTTTGAGCAATTTTGTTGATTGACATATCGTCATAATGAGAGAGGAGTAGGACATATAAAGCTATTGAGC AAAATTTGAAGGAGCAGGAT
Downstream 100 bases:
>100_bases AAAGCGTTTATGTTTAGCCAGTTTTGTTAGAAATCAGACTCGCTGAGCTGGCGTTAAAAATTTTAACACGCCGCTATTTT GGCGGCGTGTCGCAAAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Salmonella translocated effector A [H]
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MPYTSVSTYARALSGNKLPHVAAGDYENKLSTKIMKGILWVLTAGLAYGFTRVIEHCCNVTPKVEEFCANAGNIHNHLAD AVCDGLYTIDVDLSDGRRLTFEQLSLMAGREPIVRISDGEHTVEVKGSFEDICMRLEEGFLEAPAYYNYDIDEKYKTVRE RIAAYNALPQALGAIPSLKYYTDRASDMPEAKAQRAADIKDRYHNYLDNY
Sequences:
>Translated_210_residues MPYTSVSTYARALSGNKLPHVAAGDYENKLSTKIMKGILWVLTAGLAYGFTRVIEHCCNVTPKVEEFCANAGNIHNHLAD AVCDGLYTIDVDLSDGRRLTFEQLSLMAGREPIVRISDGEHTVEVKGSFEDICMRLEEGFLEAPAYYNYDIDEKYKTVRE RIAAYNALPQALGAIPSLKYYTDRASDMPEAKAQRAADIKDRYHNYLDNY >Mature_209_residues PYTSVSTYARALSGNKLPHVAAGDYENKLSTKIMKGILWVLTAGLAYGFTRVIEHCCNVTPKVEEFCANAGNIHNHLADA VCDGLYTIDVDLSDGRRLTFEQLSLMAGREPIVRISDGEHTVEVKGSFEDICMRLEEGFLEAPAYYNYDIDEKYKTVRER IAAYNALPQALGAIPSLKYYTDRASDMPEAKAQRAADIKDRYHNYLDNY
Specific function: Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. Could be required for passage of bacteria from the peritoneal cavity into the spleen, for survival and replication within host cells, or for avoiding
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted. Host cytoplasm. Note=Secreted via type III secretion systems 1 and 2 (SPI-1 and SPI-2 TTSS), and delivered into the host cytoplasm. Localizes to the trans-Golgi network within both transfected and infected host epithelial cells [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23576; Mature: 23445
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYTSVSTYARALSGNKLPHVAAGDYENKLSTKIMKGILWVLTAGLAYGFTRVIEHCCNV CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPKVEEFCANAGNIHNHLADAVCDGLYTIDVDLSDGRRLTFEQLSLMAGREPIVRISDGE CCCHHHHHCCCCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCC HTVEVKGSFEDICMRLEEGFLEAPAYYNYDIDEKYKTVRERIAAYNALPQALGAIPSLKY EEEEECCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH YTDRASDMPEAKAQRAADIKDRYHNYLDNY HHCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PYTSVSTYARALSGNKLPHVAAGDYENKLSTKIMKGILWVLTAGLAYGFTRVIEHCCNV CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPKVEEFCANAGNIHNHLADAVCDGLYTIDVDLSDGRRLTFEQLSLMAGREPIVRISDGE CCCHHHHHCCCCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCC HTVEVKGSFEDICMRLEEGFLEAPAYYNYDIDEKYKTVRERIAAYNALPQALGAIPSLKY EEEEECCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH YTDRASDMPEAKAQRAADIKDRYHNYLDNY HHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA