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The map label for this gene is ydeM [C]

Identifier: 194335072

GI number: 194335072

Start: 2463947

End: 2465281

Strand: Reverse

Name: ydeM [C]

Synonym: Paes_2284

Alternate gene names: 194335072

Gene position: 2465281-2463947 (Counterclockwise)

Preceding gene: 194335073

Following gene: 194335071

Centisome position: 98.1

GC content: 49.44

Gene sequence:

>1335_bases
ATGTACGTTAGCCTTTATACGAAAAAATTCAATATTCATGAGGACGTGACCGTATTGTATAATACGATTACGTCCTCTAT
TGATGTTTTCGATGCTGACGTGTTGTCGGAAGAGGACACTCTCCGGGCACCAGGAAACGAAGAGCTTCTCGCCTATTTGA
CCGATCGGGGTTATGTCTACTCGAGCGAACAGGACGAGCGTGATTTGATTCATCAATTGTATACCGGATACAATCAATTC
AAGCGAGAGCACCGGCCTTTGATATTTTATATCGTATTGACGTATCGTTGCGACCTTGCGTGCGATTATTGTTTTCAAAA
TTCGGCAAAAGCCCTCGACGGGTCGATCGATACTTCCCATCTGCCTGCGCTCTTCAACGCAATGGATGAGATTTGCGAAC
GTTTTCCCGATACGCGTTCGCGCCCTGTTGTGGCCCTTTTTGGCGGTGAGCCGTTGCTTCGGCAGCATGTCGGGCTCGTT
GAAGAAATTTTTCGTGAGGTAGCTGAACGGGGATGGGTCAACGGACCGATTATTTCCAACGGTGTTTCATTGGATGCTCA
CCTTCCCACATTTGAGCGCTACCGTCCTTCAGGGATTCAAGTCACTATCGACGGGCCGGAGGAGGTCCATAACCAGAGAC
GGCACACCGCTTCATACGCAGGTACGTTCAGTTCGATTGTTGAGAATGTCAATAGCGCTATCGAGGCAGGGATCAAGATG
GGCATCAGAACGAATCTTGATGACCGTAATATACACTGTCTTCCGGAGCTTGTCGATCTGGCTGAACGGCATGGCTGGAT
TGATTCTCAATCCGTTGAATTGAGTCTTGCTCCTGTCCACGAAAGGGCTTGCGGGAGTTTGCAGGAAGGCGAACGACACG
ATGCCATCTTCGAGCGGGTTCTTGCCACCATATCGCAACTGCCGAGACTGCAGCGATGGTCGCTGGATGGATGGTCGAGC
GTTCACCATTTTGATCGATTGCTGCATGAGGGGAAGGCATTTATTCCTCGATTCGATCACTGCGAGGCTGCCGTTGGAAA
AAGTTTTCACCTGGATGGATACGGCTATATTTACTCTTGCATCGAGGCTTGTGGTATGCCTGCACTTGCTGCTGGCAGGT
ATGTGCCGGAGCTTGAGTTCTTTCCGCTTTACGATGCAATGCGTCATCGCTCGGTTTTGAATATCGAGGGCTGTGCGCAT
TGTGGTTATTCGCTGGTTTGCGGAGGAGGGTGTGCTCTGCAGGCAATTTTAGACAAAAGAGACATACTGACACCGTCATG
CGCCAATACTGATGAGACAATCCGACGATATGTCGAATTTCAGTACGAAAAGTAA

Upstream 100 bases:

>100_bases
CTGAAATTCTGTTCGAAGACATCGAATGACCTTATGGCCAACAGCCCAGCGCATGCAGTGATGGATTCGTACCGAAAGCT
TTTTACCTGTAGTAAGGATC

Downstream 100 bases:

>100_bases
TCTCGTGCCAAGCGCGATCGATCGATTGTAAAGGAATATCAGGTTTGGAATCCATCTCACTTCTTAATACCGGTCCGGCT
GTTCCGCGTCTTCGTAACGG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Arylsulfatase Regulator; AstB/ChuR-Related Protein; Arylsulfatase Regulatory Protein; Transcriptional Regulator; Heme Biosynthesis Related Protein; Heme Biosynthesis Protein; Radical SAM Family Protein

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MYVSLYTKKFNIHEDVTVLYNTITSSIDVFDADVLSEEDTLRAPGNEELLAYLTDRGYVYSSEQDERDLIHQLYTGYNQF
KREHRPLIFYIVLTYRCDLACDYCFQNSAKALDGSIDTSHLPALFNAMDEICERFPDTRSRPVVALFGGEPLLRQHVGLV
EEIFREVAERGWVNGPIISNGVSLDAHLPTFERYRPSGIQVTIDGPEEVHNQRRHTASYAGTFSSIVENVNSAIEAGIKM
GIRTNLDDRNIHCLPELVDLAERHGWIDSQSVELSLAPVHERACGSLQEGERHDAIFERVLATISQLPRLQRWSLDGWSS
VHHFDRLLHEGKAFIPRFDHCEAAVGKSFHLDGYGYIYSCIEACGMPALAAGRYVPELEFFPLYDAMRHRSVLNIEGCAH
CGYSLVCGGGCALQAILDKRDILTPSCANTDETIRRYVEFQYEK

Sequences:

>Translated_444_residues
MYVSLYTKKFNIHEDVTVLYNTITSSIDVFDADVLSEEDTLRAPGNEELLAYLTDRGYVYSSEQDERDLIHQLYTGYNQF
KREHRPLIFYIVLTYRCDLACDYCFQNSAKALDGSIDTSHLPALFNAMDEICERFPDTRSRPVVALFGGEPLLRQHVGLV
EEIFREVAERGWVNGPIISNGVSLDAHLPTFERYRPSGIQVTIDGPEEVHNQRRHTASYAGTFSSIVENVNSAIEAGIKM
GIRTNLDDRNIHCLPELVDLAERHGWIDSQSVELSLAPVHERACGSLQEGERHDAIFERVLATISQLPRLQRWSLDGWSS
VHHFDRLLHEGKAFIPRFDHCEAAVGKSFHLDGYGYIYSCIEACGMPALAAGRYVPELEFFPLYDAMRHRSVLNIEGCAH
CGYSLVCGGGCALQAILDKRDILTPSCANTDETIRRYVEFQYEK
>Mature_444_residues
MYVSLYTKKFNIHEDVTVLYNTITSSIDVFDADVLSEEDTLRAPGNEELLAYLTDRGYVYSSEQDERDLIHQLYTGYNQF
KREHRPLIFYIVLTYRCDLACDYCFQNSAKALDGSIDTSHLPALFNAMDEICERFPDTRSRPVVALFGGEPLLRQHVGLV
EEIFREVAERGWVNGPIISNGVSLDAHLPTFERYRPSGIQVTIDGPEEVHNQRRHTASYAGTFSSIVENVNSAIEAGIKM
GIRTNLDDRNIHCLPELVDLAERHGWIDSQSVELSLAPVHERACGSLQEGERHDAIFERVLATISQLPRLQRWSLDGWSS
VHHFDRLLHEGKAFIPRFDHCEAAVGKSFHLDGYGYIYSCIEACGMPALAAGRYVPELEFFPLYDAMRHRSVLNIEGCAH
CGYSLVCGGGCALQAILDKRDILTPSCANTDETIRRYVEFQYEK

Specific function: Unknown

COG id: COG0641

COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50284; Mature: 50284

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVSLYTKKFNIHEDVTVLYNTITSSIDVFDADVLSEEDTLRAPGNEELLAYLTDRGYVY
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEE
SSEQDERDLIHQLYTGYNQFKREHRPLIFYIVLTYRCDLACDYCFQNSAKALDGSIDTSH
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHCCCCHHHCCCCCCHH
LPALFNAMDEICERFPDTRSRPVVALFGGEPLLRQHVGLVEEIFREVAERGWVNGPIISN
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECC
GVSLDAHLPTFERYRPSGIQVTIDGPEEVHNQRRHTASYAGTFSSIVENVNSAIEAGIKM
CCEECCCCCHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIRTNLDDRNIHCLPELVDLAERHGWIDSQSVELSLAPVHERACGSLQEGERHDAIFERV
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHH
LATISQLPRLQRWSLDGWSSVHHFDRLLHEGKAFIPRFDHCEAAVGKSFHLDGYGYIYSC
HHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEECCCHHHHHHH
IEACGMPALAAGRYVPELEFFPLYDAMRHRSVLNIEGCAHCGYSLVCGGGCALQAILDKR
HHHHCCCHHHHCCCCCCCCEEEHHHHHHHCCEECCCHHHHCCCEEEECCCHHHHHHHHHH
DILTPSCANTDETIRRYVEFQYEK
HCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYVSLYTKKFNIHEDVTVLYNTITSSIDVFDADVLSEEDTLRAPGNEELLAYLTDRGYVY
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEE
SSEQDERDLIHQLYTGYNQFKREHRPLIFYIVLTYRCDLACDYCFQNSAKALDGSIDTSH
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHCCCCHHHCCCCCCHH
LPALFNAMDEICERFPDTRSRPVVALFGGEPLLRQHVGLVEEIFREVAERGWVNGPIISN
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECC
GVSLDAHLPTFERYRPSGIQVTIDGPEEVHNQRRHTASYAGTFSSIVENVNSAIEAGIKM
CCEECCCCCHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIRTNLDDRNIHCLPELVDLAERHGWIDSQSVELSLAPVHERACGSLQEGERHDAIFERV
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHH
LATISQLPRLQRWSLDGWSSVHHFDRLLHEGKAFIPRFDHCEAAVGKSFHLDGYGYIYSC
HHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEECCCHHHHHHH
IEACGMPALAAGRYVPELEFFPLYDAMRHRSVLNIEGCAHCGYSLVCGGGCALQAILDKR
HHHHCCCHHHHCCCCCCCCEEEHHHHHHHCCEECCCHHHHCCCEEEECCCHHHHHHHHHH
DILTPSCANTDETIRRYVEFQYEK
HCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA