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The map label for this gene is 194335071

Identifier: 194335071

GI number: 194335071

Start: 2462481

End: 2463902

Strand: Reverse

Name: 194335071

Synonym: Paes_2283

Alternate gene names: NA

Gene position: 2463902-2462481 (Counterclockwise)

Preceding gene: 194335072

Following gene: 194335070

Centisome position: 98.05

GC content: 51.34

Gene sequence:

>1422_bases
TTGGAATCCATCTCACTTCTTAATACCGGTCCGGCTGTTCCGCGTCTTCGTAACGGTTGCTTGCTGAAGCCGCCGCCGCT
GGGAATTCTCAGTCTTGCCGCATGGCTTCGCTCTCATGGAGTCACGCTGAACATTGCCGACTATCAGCTTGCCGGGGGGG
ATATGGGCGAGCAGTTGCTTCCTTCGCGATTTGCATCATTTATCGAAGAGCACTCCCCCGCACCGATTATCGGGATCAGT
ACCATGGGAGGGATGCTCCCTGTCGTTCTCATGGCTGTCGAAGAATACAAGGCCAGACATCCGGAAAAAACGATTATCCT
CGGAGGATCAGGCCCAGCAGGTGTAGCAGCTCACATTCTTCGTGCCTTTCCGGCCGTTGACTGCATTTTTTGCGGGGAAG
GCGAAGCTGCTCTCCTGGAATTTCTTGAGAAAAACGGCGATCCTTCCTCCGTCGCAGGAGTCGTGTACAGGGAGGGTGAT
TCGATCGTCGAAAATCCTGCGCGCAAGAGGATCTCCGATCTTGACGTTCTTCCTGTTCCCGCATACGATCTCATCGATAT
GGACCGGTATGCCGTGGTAAATGTGAGTACTTCCCGAGGCTGTCCCTATCGTTGCGCTTTTTGCGAGTCGCCGGCATTCT
GGGGAAAGGGTGTTGTCTACAGGTCTCTCGATAATGTGATGAATGAAATCCGTGAGCTTCGAACGCGATGGGCAAAGCGC
CAGATTAATCTTTGTGATGACACCTTTGTTGCCCGCAGGCCACGCGTTGAGGAGTTTTGCCGACGCGTCATTTCGGAAAA
ACTTGACTTCCGATGGGAATGTTTCGCCAGAGTCGATCTGGTGGATCCGGATCTGATGAAACTTATGGCAGAGGCTGGTT
GCAGTGGTGTCTTTTTCGGTGTGGAATCGGGATCGGATTCGGTGCTCTCCCGAATTGACAAACGCTTTACCGTTGCCAGA
GCGCGTGACGTGATCTCGCAAGCGGTAAAGATTTTTCCTCATGTCTATACATCGTTTGTTTGGGGGCTGCCATTTGAAAC
CATGGAGGATTTCTACGATTCCATCCTGCTTATGACGGAGTTCGGTAATTCGGGTGTTCGTGTTCAACGCCCTCATTTTT
CTCTTCGGCCGGGAGCGCCCTTGTTTGCCGAATACGGATACGATCTGGCGTACTCTTCCTCCTTACCCTATCATTTTCTT
GAAGTTCCGCGCAGATTTCTCCCTCCGGAAGTTGAGGAGACCATTCGGCGATATCCAGAGATTTTTATTACGTTTTACCA
CATAACGGGATTGGAATTTGAGGAAAAACAACTGTTTATGCGCAACCTCGAAGCACTCGGCGAGGAAAAGTGGCGGATCA
TGGCAGAACATCTTGGCTGTGTCGTCAATGAAATCCACGGTGATAAGAACAACAACATGTAG

Upstream 100 bases:

>100_bases
GCGCCAATACTGATGAGACAATCCGACGATATGTCGAATTTCAGTACGAAAAGTAATCTCGTGCCAAGCGCGATCGATCG
ATTGTAAAGGAATATCAGGT

Downstream 100 bases:

>100_bases
GAAAACGTCTGCTTATGACCTCATCATCGGATTCTACAAGTCTTGCTGAAGGACGGCGATGCTTTGAAGAGGGGGATTAC
TCTCAAGCCAAGCATACTCT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MESISLLNTGPAVPRLRNGCLLKPPPLGILSLAAWLRSHGVTLNIADYQLAGGDMGEQLLPSRFASFIEEHSPAPIIGIS
TMGGMLPVVLMAVEEYKARHPEKTIILGGSGPAGVAAHILRAFPAVDCIFCGEGEAALLEFLEKNGDPSSVAGVVYREGD
SIVENPARKRISDLDVLPVPAYDLIDMDRYAVVNVSTSRGCPYRCAFCESPAFWGKGVVYRSLDNVMNEIRELRTRWAKR
QINLCDDTFVARRPRVEEFCRRVISEKLDFRWECFARVDLVDPDLMKLMAEAGCSGVFFGVESGSDSVLSRIDKRFTVAR
ARDVISQAVKIFPHVYTSFVWGLPFETMEDFYDSILLMTEFGNSGVRVQRPHFSLRPGAPLFAEYGYDLAYSSSLPYHFL
EVPRRFLPPEVEETIRRYPEIFITFYHITGLEFEEKQLFMRNLEALGEEKWRIMAEHLGCVVNEIHGDKNNNM

Sequences:

>Translated_473_residues
MESISLLNTGPAVPRLRNGCLLKPPPLGILSLAAWLRSHGVTLNIADYQLAGGDMGEQLLPSRFASFIEEHSPAPIIGIS
TMGGMLPVVLMAVEEYKARHPEKTIILGGSGPAGVAAHILRAFPAVDCIFCGEGEAALLEFLEKNGDPSSVAGVVYREGD
SIVENPARKRISDLDVLPVPAYDLIDMDRYAVVNVSTSRGCPYRCAFCESPAFWGKGVVYRSLDNVMNEIRELRTRWAKR
QINLCDDTFVARRPRVEEFCRRVISEKLDFRWECFARVDLVDPDLMKLMAEAGCSGVFFGVESGSDSVLSRIDKRFTVAR
ARDVISQAVKIFPHVYTSFVWGLPFETMEDFYDSILLMTEFGNSGVRVQRPHFSLRPGAPLFAEYGYDLAYSSSLPYHFL
EVPRRFLPPEVEETIRRYPEIFITFYHITGLEFEEKQLFMRNLEALGEEKWRIMAEHLGCVVNEIHGDKNNNM
>Mature_473_residues
MESISLLNTGPAVPRLRNGCLLKPPPLGILSLAAWLRSHGVTLNIADYQLAGGDMGEQLLPSRFASFIEEHSPAPIIGIS
TMGGMLPVVLMAVEEYKARHPEKTIILGGSGPAGVAAHILRAFPAVDCIFCGEGEAALLEFLEKNGDPSSVAGVVYREGD
SIVENPARKRISDLDVLPVPAYDLIDMDRYAVVNVSTSRGCPYRCAFCESPAFWGKGVVYRSLDNVMNEIRELRTRWAKR
QINLCDDTFVARRPRVEEFCRRVISEKLDFRWECFARVDLVDPDLMKLMAEAGCSGVFFGVESGSDSVLSRIDKRFTVAR
ARDVISQAVKIFPHVYTSFVWGLPFETMEDFYDSILLMTEFGNSGVRVQRPHFSLRPGAPLFAEYGYDLAYSSSLPYHFL
EVPRRFLPPEVEETIRRYPEIFITFYHITGLEFEEKQLFMRNLEALGEEKWRIMAEHLGCVVNEIHGDKNNNM

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 53179; Mature: 53179

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESISLLNTGPAVPRLRNGCLLKPPPLGILSLAAWLRSHGVTLNIADYQLAGGDMGEQLL
CCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCEEECCCCCCHHHH
PSRFASFIEEHSPAPIIGISTMGGMLPVVLMAVEEYKARHPEKTIILGGSGPAGVAAHIL
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
RAFPAVDCIFCGEGEAALLEFLEKNGDPSSVAGVVYREGDSIVENPARKRISDLDVLPVP
HHCCCCEEEEECCCHHHHHHHHHCCCCCCHHEEEEEECCCHHHHCHHHHHHCCCCCCCCC
AYDLIDMDRYAVVNVSTSRGCPYRCAFCESPAFWGKGVVYRSLDNVMNEIRELRTRWAKR
CHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QINLCDDTFVARRPRVEEFCRRVISEKLDFRWECFARVDLVDPDLMKLMAEAGCSGVFFG
HCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEE
VESGSDSVLSRIDKRFTVARARDVISQAVKIFPHVYTSFVWGLPFETMEDFYDSILLMTE
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEE
FGNSGVRVQRPHFSLRPGAPLFAEYGYDLAYSSSLPYHFLEVPRRFLPPEVEETIRRYPE
CCCCCCEEECCCCCCCCCCCHHHHCCCCEEECCCCCHHHHHCCHHHCCCCHHHHHHHCHH
IFITFYHITGLEFEEKQLFMRNLEALGEEKWRIMAEHLGCVVNEIHGDKNNNM
HEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MESISLLNTGPAVPRLRNGCLLKPPPLGILSLAAWLRSHGVTLNIADYQLAGGDMGEQLL
CCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCEEECCCCCCHHHH
PSRFASFIEEHSPAPIIGISTMGGMLPVVLMAVEEYKARHPEKTIILGGSGPAGVAAHIL
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
RAFPAVDCIFCGEGEAALLEFLEKNGDPSSVAGVVYREGDSIVENPARKRISDLDVLPVP
HHCCCCEEEEECCCHHHHHHHHHCCCCCCHHEEEEEECCCHHHHCHHHHHHCCCCCCCCC
AYDLIDMDRYAVVNVSTSRGCPYRCAFCESPAFWGKGVVYRSLDNVMNEIRELRTRWAKR
CHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QINLCDDTFVARRPRVEEFCRRVISEKLDFRWECFARVDLVDPDLMKLMAEAGCSGVFFG
HCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEE
VESGSDSVLSRIDKRFTVARARDVISQAVKIFPHVYTSFVWGLPFETMEDFYDSILLMTE
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEE
FGNSGVRVQRPHFSLRPGAPLFAEYGYDLAYSSSLPYHFLEVPRRFLPPEVEETIRRYPE
CCCCCCEEECCCCCCCCCCCHHHHCCCCEEECCCCCHHHHHCCHHHCCCCHHHHHHHCHH
IFITFYHITGLEFEEKQLFMRNLEALGEEKWRIMAEHLGCVVNEIHGDKNNNM
HEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]