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The map label for this gene is 194335045

Identifier: 194335045

GI number: 194335045

Start: 2434453

End: 2434887

Strand: Reverse

Name: 194335045

Synonym: Paes_2257

Alternate gene names: NA

Gene position: 2434887-2434453 (Counterclockwise)

Preceding gene: 194335046

Following gene: 194335044

Centisome position: 96.89

GC content: 47.59

Gene sequence:

>435_bases
ATGAAAATTCCTGATAAACCCGCCCGCCTGAAAGCTTCTCCGTCGTTCAGAACATTTTTGATGACCGCATTGTCCTACAG
GGTCAAGCCCGGTATGGCAGCGTGGGTCCTTCATCGACTGACAGGTCTTCTTCTTGTGATCTATCTTCCTCTTCATGTTA
TGGGGCTTCGCTCTCTGAGTGATCCTGTTCGCTTTGAGAAGTATGTGACGCTCTATCGAAATCCGCTCTTCAAGATGGCC
GAAGTTGCTCTTCTTGCTGTCGTCGCATTTCATGCGTTCAATGGTATCCGGATTCTTCTGCAGGATCTCTACTTCAGGTC
CGATACTCAGCGTCCTTTGTTTTATGCAGTTGTCGTGCTTACGGTGCTGGTGACTGCAGTGGTCGGTTATCCGATCCTTT
CCCCGTATATTATCGCCTTGTTTATTTTTCAATAA

Upstream 100 bases:

>100_bases
TTGTAGAGGGTATAAGGCTGTTGTTCTTTAATCGGGGTATGTTATTTTGCTGCGCTAGAGATCTTTTCCTAAATCGTAAT
GCACTGAATGGTGCCGGATA

Downstream 100 bases:

>100_bases
TGCAGACAGACAAGAGAAAGGTATGAATCAGTCACTTCATGAGACACCGCCGGTAACTATTTCTTCAAAGATCGAGGCGT
TTGGCTGGGTGATGCAGCGC

Product: succinate dehydrogenase, cytochrome b556 subunit

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Membrane Subunit

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKIPDKPARLKASPSFRTFLMTALSYRVKPGMAAWVLHRLTGLLLVIYLPLHVMGLRSLSDPVRFEKYVTLYRNPLFKMA
EVALLAVVAFHAFNGIRILLQDLYFRSDTQRPLFYAVVVLTVLVTAVVGYPILSPYIIALFIFQ

Sequences:

>Translated_144_residues
MKIPDKPARLKASPSFRTFLMTALSYRVKPGMAAWVLHRLTGLLLVIYLPLHVMGLRSLSDPVRFEKYVTLYRNPLFKMA
EVALLAVVAFHAFNGIRILLQDLYFRSDTQRPLFYAVVVLTVLVTAVVGYPILSPYIIALFIFQ
>Mature_144_residues
MKIPDKPARLKASPSFRTFLMTALSYRVKPGMAAWVLHRLTGLLLVIYLPLHVMGLRSLSDPVRFEKYVTLYRNPLFKMA
EVALLAVVAFHAFNGIRILLQDLYFRSDTQRPLFYAVVVLTVLVTAVVGYPILSPYIIALFIFQ

Specific function: Unknown

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 16416; Mature: 16416

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPDKPARLKASPSFRTFLMTALSYRVKPGMAAWVLHRLTGLLLVIYLPLHVMGLRSLS
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPVRFEKYVTLYRNPLFKMAEVALLAVVAFHAFNGIRILLQDLYFRSDTQRPLFYAVVVL
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
TVLVTAVVGYPILSPYIIALFIFQ
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIPDKPARLKASPSFRTFLMTALSYRVKPGMAAWVLHRLTGLLLVIYLPLHVMGLRSLS
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPVRFEKYVTLYRNPLFKMAEVALLAVVAFHAFNGIRILLQDLYFRSDTQRPLFYAVVVL
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
TVLVTAVVGYPILSPYIIALFIFQ
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA