| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194335021
Identifier: 194335021
GI number: 194335021
Start: 2411899
End: 2413302
Strand: Reverse
Name: 194335021
Synonym: Paes_2232
Alternate gene names: NA
Gene position: 2413302-2411899 (Counterclockwise)
Preceding gene: 194335022
Following gene: 194335020
Centisome position: 96.04
GC content: 52.28
Gene sequence:
>1404_bases ATGACAAAGTCAGATACACATCTTGTCGAACACCGGAACAATCGCAGCGATACTGCTGTGGTTTTTATACATGGATTCAA CGGCGATGCGAGTTCGGGAACCTGGGGGGATTTTCCCGACTATGTCAGGAACAATCCTGCTCTTGCAAACTGGGATATTT ATTCGCTTGGTTATGCAACAAAACTGAGTATCGATCTTGTGGGGTTATGGGAAGCATGTCCTGATATTTCGAAACTGGCC TGTTTTCTGCATACCTGCTGTATGAATCCTCCACTTGACCGCTATAAAAGTCTTGCGCTTGTCGCCCACAGCATGGGCGG ACTGGTTGTGCAGCGAGCACTTGTGGATTACGACGACCTTGTACGTGTCGTCAGTCATGTTTTTCTCTTCGGAACCCCGA GTGGCGGACTGGCAAAGGCATCGCCGTTCAAAATGCTGAACCGGCAGGTCAGGGATATGGTTCGCAACGGGCCGTTTGTC AAGGATCTCCGTCATCGCTGGGTGCTTAGGTTCGGTGATGCTGCGGGAAAAATCCTTCCGTTCAAATTCTGGGCAGTCGC AGGTGATCGTGATGAATTTGTTCCGGCGGGCTCTTCGCTTGAGCCCTTCAGGAAACATTTTTCTCAGGCCTCTGTCTGTG TCGTTCCCGGAAATCATCTTGATATCATCAAGCCGCTCTCATCGAATCATTTGAGCGCTCAGCTTCTTTTCAAAGGGCTG CAGGGTACGGCAGGAATTTCGGGTCCATGGACAGGCGCTGCAGTTGCCGTTGAATCGCGCGAGTTTGTGAAAGCTATCGA GTTGTTTGAGCCTCACCAGGAGGACCTCGATACTGATGCGGCGACCCTGCTTGCCCTTGCGCTGGAAGGCGTTGGCCGTT CAAAAGATGCTATGGCATTGCTTGAAAAATACAAGGGATCGAGTACTGACGCTATGGGCGTCCTTGCTGGAAGACTGAAG CGGCGCTGGCTGGTCGAGCGCAGGGCTGCCGATGCTCTGAGGGCAAGGGAGTTATACGCCGAGGCCTACAAGATAGCAGA ACAAGCTGGAGATCATGCACAGGCCTTCTACCATGGCATCAACATTGCGTTCATGGACCTCGCGTACTCTTCAGCCCGAA CCGAGGCTAAAGCCAATGCTTCCCGAATGGCAGCAAAGGTGTTGCTCCACTGTAAATCCGCAAAGCCGGAAAAATGGCGT TTTGCAACCGAAGCCGAAGCGCTGCTGATGCAGGGAGAGGGTGCAGCTGCGCTGGGGCGTTACAAGGCATATATCGAGGA GTGTCCTTCGCCAAGGGAAGTCGAGTCAACATACATGCAGGCAAAGAAAGTAGCTGATCTTATGGGGTTGAGAAGCCTCA ACGATCAGCTTGACCGCCTTTTTCTTGGAATCGGGCAATCCTGA
Upstream 100 bases:
>100_bases CTTGGCCGCGTTCTGCGAAATTCTGCGTGATTTGCCTGTGAACCCACGTCTCTACGGGGTTTTGTCTTTGAAATGATGGT TTTATAGGAGGGAAACAGCC
Downstream 100 bases:
>100_bases TTTTCTTTCCATAAGTATCTGATTGTGCAATAATGATTGAAAAAGAAGGAGGGATAATGTCAAAGCCGCTTTGTTTTGTG CTGATGCCTTTTGCTCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MTKSDTHLVEHRNNRSDTAVVFIHGFNGDASSGTWGDFPDYVRNNPALANWDIYSLGYATKLSIDLVGLWEACPDISKLA CFLHTCCMNPPLDRYKSLALVAHSMGGLVVQRALVDYDDLVRVVSHVFLFGTPSGGLAKASPFKMLNRQVRDMVRNGPFV KDLRHRWVLRFGDAAGKILPFKFWAVAGDRDEFVPAGSSLEPFRKHFSQASVCVVPGNHLDIIKPLSSNHLSAQLLFKGL QGTAGISGPWTGAAVAVESREFVKAIELFEPHQEDLDTDAATLLALALEGVGRSKDAMALLEKYKGSSTDAMGVLAGRLK RRWLVERRAADALRARELYAEAYKIAEQAGDHAQAFYHGINIAFMDLAYSSARTEAKANASRMAAKVLLHCKSAKPEKWR FATEAEALLMQGEGAAALGRYKAYIEECPSPREVESTYMQAKKVADLMGLRSLNDQLDRLFLGIGQS
Sequences:
>Translated_467_residues MTKSDTHLVEHRNNRSDTAVVFIHGFNGDASSGTWGDFPDYVRNNPALANWDIYSLGYATKLSIDLVGLWEACPDISKLA CFLHTCCMNPPLDRYKSLALVAHSMGGLVVQRALVDYDDLVRVVSHVFLFGTPSGGLAKASPFKMLNRQVRDMVRNGPFV KDLRHRWVLRFGDAAGKILPFKFWAVAGDRDEFVPAGSSLEPFRKHFSQASVCVVPGNHLDIIKPLSSNHLSAQLLFKGL QGTAGISGPWTGAAVAVESREFVKAIELFEPHQEDLDTDAATLLALALEGVGRSKDAMALLEKYKGSSTDAMGVLAGRLK RRWLVERRAADALRARELYAEAYKIAEQAGDHAQAFYHGINIAFMDLAYSSARTEAKANASRMAAKVLLHCKSAKPEKWR FATEAEALLMQGEGAAALGRYKAYIEECPSPREVESTYMQAKKVADLMGLRSLNDQLDRLFLGIGQS >Mature_466_residues TKSDTHLVEHRNNRSDTAVVFIHGFNGDASSGTWGDFPDYVRNNPALANWDIYSLGYATKLSIDLVGLWEACPDISKLAC FLHTCCMNPPLDRYKSLALVAHSMGGLVVQRALVDYDDLVRVVSHVFLFGTPSGGLAKASPFKMLNRQVRDMVRNGPFVK DLRHRWVLRFGDAAGKILPFKFWAVAGDRDEFVPAGSSLEPFRKHFSQASVCVVPGNHLDIIKPLSSNHLSAQLLFKGLQ GTAGISGPWTGAAVAVESREFVKAIELFEPHQEDLDTDAATLLALALEGVGRSKDAMALLEKYKGSSTDAMGVLAGRLKR RWLVERRAADALRARELYAEAYKIAEQAGDHAQAFYHGINIAFMDLAYSSARTEAKANASRMAAKVLLHCKSAKPEKWRF ATEAEALLMQGEGAAALGRYKAYIEECPSPREVESTYMQAKKVADLMGLRSLNDQLDRLFLGIGQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51380; Mature: 51249
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSDTHLVEHRNNRSDTAVVFIHGFNGDASSGTWGDFPDYVRNNPALANWDIYSLGYAT CCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCEECCCEEECCCEE KLSIDLVGLWEACPDISKLACFLHTCCMNPPLDRYKSLALVAHSMGGLVVQRALVDYDDL EEEEEEEEHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VRVVSHVFLFGTPSGGLAKASPFKMLNRQVRDMVRNGPFVKDLRHRWVLRFGDAAGKILP HHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEE FKFWAVAGDRDEFVPAGSSLEPFRKHFSQASVCVVPGNHLDIIKPLSSNHLSAQLLFKGL EEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHC QGTAGISGPWTGAAVAVESREFVKAIELFEPHQEDLDTDAATLLALALEGVGRSKDAMAL CCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCCCHHHHHH LEKYKGSSTDAMGVLAGRLKRRWLVERRAADALRARELYAEAYKIAEQAGDHAQAFYHGI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC NIAFMDLAYSSARTEAKANASRMAAKVLLHCKSAKPEKWRFATEAEALLMQGEGAAALGR CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHCCCCCCHHHHH YKAYIEECPSPREVESTYMQAKKVADLMGLRSLNDQLDRLFLGIGQS HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TKSDTHLVEHRNNRSDTAVVFIHGFNGDASSGTWGDFPDYVRNNPALANWDIYSLGYAT CCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCEECCCEEECCCEE KLSIDLVGLWEACPDISKLACFLHTCCMNPPLDRYKSLALVAHSMGGLVVQRALVDYDDL EEEEEEEEHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VRVVSHVFLFGTPSGGLAKASPFKMLNRQVRDMVRNGPFVKDLRHRWVLRFGDAAGKILP HHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEE FKFWAVAGDRDEFVPAGSSLEPFRKHFSQASVCVVPGNHLDIIKPLSSNHLSAQLLFKGL EEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHC QGTAGISGPWTGAAVAVESREFVKAIELFEPHQEDLDTDAATLLALALEGVGRSKDAMAL CCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCCCHHHHHH LEKYKGSSTDAMGVLAGRLKRRWLVERRAADALRARELYAEAYKIAEQAGDHAQAFYHGI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC NIAFMDLAYSSARTEAKANASRMAAKVLLHCKSAKPEKWRFATEAEALLMQGEGAAALGR CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHCCCCCCHHHHH YKAYIEECPSPREVESTYMQAKKVADLMGLRSLNDQLDRLFLGIGQS HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA