| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
Click here to switch to the map view.
The map label for this gene is 194334946
Identifier: 194334946
GI number: 194334946
Start: 2330741
End: 2331409
Strand: Reverse
Name: 194334946
Synonym: Paes_2156
Alternate gene names: NA
Gene position: 2331409-2330741 (Counterclockwise)
Preceding gene: 194334947
Following gene: 194334945
Centisome position: 92.78
GC content: 50.37
Gene sequence:
>669_bases ATGGATTTACAGGGCGCAGTCTCATTTATCGAGGCGTTGCAGTCGAACAACAATCGCGAGTGGTTCCATGTCAATAAGGC TCGTTACGAGGATGCCCGGGCGGCGTTCGAGTCCCTTGTCGGCGTGGTGATTCCTGTTGTGAAGGGGATCGATCCTTCTG TCGACGTCGATGATCCCGGGGAGTGTCTATTCAGGATTTATCGCGACGTTCGGTTTTCTAAAGACAAGTCTCCTTACAAA AACAATTTCGGTGCGTTCATTGCCAAAGGGGGGCGTAAAAGCCCCTATGCCGGCTATTACCTGCATATCGAGCCGGGAGC GTCTTTTGTGGGAGGAGGCGCCTACATGCCTCAAGCCCCGTATCTTAAAGCCATCAGGCAGAGCATCTACGAGCACCCTC GTGAGTATAAAGCCATTCTGCATAGTGATGATTTCAGTTCATGCTTCGGCACGATATTTGGCGAAACCCTGAAGACCTCC CCCAGGGATTTTCCAAAGGATTTCCCGGATATCGAGCTTCTGAAGCATAAGCATTACGCCGTCACTCATCCTGTGGACGA CCAATTCTGGATCTCCGGGGATGTCATAGATCGTATGAGGGAGATCTTTGCCGTACTCTATCCTTTCAACAGATTTCTCA ATACTGCTATTGCATCAGTCATGTCGTAG
Upstream 100 bases:
>100_bases TTTTCGTGCAGGGTGATTCCTTGCGATGCGCTGCATTCGTCTGAGGTGAGGGGAAAGTCAACGAGCGTTGCCAGGACGTG ACAGCAAAGGAGAATTTTCA
Downstream 100 bases:
>100_bases GTATGTTCGTGATTTCCTGACACGGTGACTGTCTGCGTGGAAAACCTTTTTGTCTCTCCTGTTGTTCATTTCTGTAGACG GATAGCAAGCTTGAATCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MDLQGAVSFIEALQSNNNREWFHVNKARYEDARAAFESLVGVVIPVVKGIDPSVDVDDPGECLFRIYRDVRFSKDKSPYK NNFGAFIAKGGRKSPYAGYYLHIEPGASFVGGGAYMPQAPYLKAIRQSIYEHPREYKAILHSDDFSSCFGTIFGETLKTS PRDFPKDFPDIELLKHKHYAVTHPVDDQFWISGDVIDRMREIFAVLYPFNRFLNTAIASVMS
Sequences:
>Translated_222_residues MDLQGAVSFIEALQSNNNREWFHVNKARYEDARAAFESLVGVVIPVVKGIDPSVDVDDPGECLFRIYRDVRFSKDKSPYK NNFGAFIAKGGRKSPYAGYYLHIEPGASFVGGGAYMPQAPYLKAIRQSIYEHPREYKAILHSDDFSSCFGTIFGETLKTS PRDFPKDFPDIELLKHKHYAVTHPVDDQFWISGDVIDRMREIFAVLYPFNRFLNTAIASVMS >Mature_222_residues MDLQGAVSFIEALQSNNNREWFHVNKARYEDARAAFESLVGVVIPVVKGIDPSVDVDDPGECLFRIYRDVRFSKDKSPYK NNFGAFIAKGGRKSPYAGYYLHIEPGASFVGGGAYMPQAPYLKAIRQSIYEHPREYKAILHSDDFSSCFGTIFGETLKTS PRDFPKDFPDIELLKHKHYAVTHPVDDQFWISGDVIDRMREIFAVLYPFNRFLNTAIASVMS
Specific function: Unknown
COG id: COG5587
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25204; Mature: 25204
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLQGAVSFIEALQSNNNREWFHVNKARYEDARAAFESLVGVVIPVVKGIDPSVDVDDPG CCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH ECLFRIYRDVRFSKDKSPYKNNFGAFIAKGGRKSPYAGYYLHIEPGASFVGGGAYMPQAP HHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCEECCCCCCCCCH YLKAIRQSIYEHPREYKAILHSDDFSSCFGTIFGETLKTSPRDFPKDFPDIELLKHKHYA HHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEE VTHPVDDQFWISGDVIDRMREIFAVLYPFNRFLNTAIASVMS EECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDLQGAVSFIEALQSNNNREWFHVNKARYEDARAAFESLVGVVIPVVKGIDPSVDVDDPG CCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH ECLFRIYRDVRFSKDKSPYKNNFGAFIAKGGRKSPYAGYYLHIEPGASFVGGGAYMPQAP HHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCEECCCCCCCCCH YLKAIRQSIYEHPREYKAILHSDDFSSCFGTIFGETLKTSPRDFPKDFPDIELLKHKHYA HHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEE VTHPVDDQFWISGDVIDRMREIFAVLYPFNRFLNTAIASVMS EECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA