| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194334947
Identifier: 194334947
GI number: 194334947
Start: 2331494
End: 2332621
Strand: Reverse
Name: 194334947
Synonym: Paes_2157
Alternate gene names: NA
Gene position: 2332621-2331494 (Counterclockwise)
Preceding gene: 194334948
Following gene: 194334946
Centisome position: 92.83
GC content: 55.67
Gene sequence:
>1128_bases ATGGGGCTCTCTCGAAGACAATTTCTGGTTCGTACGGCAACGTGTGCGGTTTTGTTCGGGCTCGCACCGGGGCTTTCGGC CTGCAATGGCGTGATTCGGCATGATAGTCGTAAAGGGGAGGCGTACGATGCTCTTCTGGGGGCTATCGGCCAGGAACGGA CCGATATGCTCTGGTATGCGTCGCTTGCCCCGAGCAGCCATAATGTTCAGCCCTGGACGGTGATTATCGATTCTGATCGA TGGACCATCGGGTCTGCCAGTTCCCGCTGGCTGCCGGCTGTGGATCCTGAAAACAGGGAGATGCTGCTGTCTGTCGGAGC GTTTGTGGAGAATCTTACGCTTGCAGGGTCACGTTTTGGTATAGGTGTCCGCTCCAGGGTGATTGCGCAAAGTCCGAACG ATCCCGAGCTTGTGGAACTGCAGCTGAGCAAGGTTTCGCCATCGGGCTACCCGCTCGAGCGACTTGAAAAGCGCATGACG TTACGCGGTCCGTTTCAAAGTCAGGAGATTGAGGCGTCCGATTTTTCTTCGCTTATCGACGGCGACGAAGGGTTTTTTTA TTTTCCGCCAGCCTCATTGGAGGCAGCATGGCTCGATGAGGCAACCATTGCAGCTAATCGTCAGCAGGTCAAACGGCAGG ATGTTGCATCGGAGCTTGCCTCCTGGATACGATGGTCGGATGCTGATGCGCGTCAATACCGCAACGGGCTGACCCCGGAA TCCATGGGTATTACCGGTCTTACCGGGTGGTATGTTCGCAACTTCTATGGGCGCGACGATGTGCTGAACCAGGATTTTCG GAAAAATACAGTTAACAGGGTTGTTTCGCAGGTGGCCGAAAGCGGTGGCTGGATTGTGGTGACGTCGGATAACGGCACTC CATCAGCGTTGATCCAGGCAGGCAGACGCTTCGAGCGTATGCTTCTCAAGGCCAGGGGACTTTCTATCGGCATTCATCCC ATGTCGCAGGTGCTCGAAGAGGCTCCCTGGAAGCGCGACGTGCGTGATGCACTGAAGGTACAGAAATCGCCCCAGCTGCT TCTGCGTGTGGGTTATACCAGAGACTATACTGATCCTGTCAGTGTGAGGATGCCGCTCGATCGCGTAGTCAGTTTTCGTG CAGGGTGA
Upstream 100 bases:
>100_bases TTCCTTTATTATACAGGGGAAAAGATCTTTTCTCCTCTATTAGCTTTTCCGGTTTCGCCGGATTGTGAGTTCTTATAAGC AGTCAACTATTCTCTGAGGT
Downstream 100 bases:
>100_bases TTCCTTGCGATGCGCTGCATTCGTCTGAGGTGAGGGGAAAGTCAACGAGCGTTGCCAGGACGTGACAGCAAAGGAGAATT TTCAATGGATTTACAGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MGLSRRQFLVRTATCAVLFGLAPGLSACNGVIRHDSRKGEAYDALLGAIGQERTDMLWYASLAPSSHNVQPWTVIIDSDR WTIGSASSRWLPAVDPENREMLLSVGAFVENLTLAGSRFGIGVRSRVIAQSPNDPELVELQLSKVSPSGYPLERLEKRMT LRGPFQSQEIEASDFSSLIDGDEGFFYFPPASLEAAWLDEATIAANRQQVKRQDVASELASWIRWSDADARQYRNGLTPE SMGITGLTGWYVRNFYGRDDVLNQDFRKNTVNRVVSQVAESGGWIVVTSDNGTPSALIQAGRRFERMLLKARGLSIGIHP MSQVLEEAPWKRDVRDALKVQKSPQLLLRVGYTRDYTDPVSVRMPLDRVVSFRAG
Sequences:
>Translated_375_residues MGLSRRQFLVRTATCAVLFGLAPGLSACNGVIRHDSRKGEAYDALLGAIGQERTDMLWYASLAPSSHNVQPWTVIIDSDR WTIGSASSRWLPAVDPENREMLLSVGAFVENLTLAGSRFGIGVRSRVIAQSPNDPELVELQLSKVSPSGYPLERLEKRMT LRGPFQSQEIEASDFSSLIDGDEGFFYFPPASLEAAWLDEATIAANRQQVKRQDVASELASWIRWSDADARQYRNGLTPE SMGITGLTGWYVRNFYGRDDVLNQDFRKNTVNRVVSQVAESGGWIVVTSDNGTPSALIQAGRRFERMLLKARGLSIGIHP MSQVLEEAPWKRDVRDALKVQKSPQLLLRVGYTRDYTDPVSVRMPLDRVVSFRAG >Mature_374_residues GLSRRQFLVRTATCAVLFGLAPGLSACNGVIRHDSRKGEAYDALLGAIGQERTDMLWYASLAPSSHNVQPWTVIIDSDRW TIGSASSRWLPAVDPENREMLLSVGAFVENLTLAGSRFGIGVRSRVIAQSPNDPELVELQLSKVSPSGYPLERLEKRMTL RGPFQSQEIEASDFSSLIDGDEGFFYFPPASLEAAWLDEATIAANRQQVKRQDVASELASWIRWSDADARQYRNGLTPES MGITGLTGWYVRNFYGRDDVLNQDFRKNTVNRVVSQVAESGGWIVVTSDNGTPSALIQAGRRFERMLLKARGLSIGIHPM SQVLEEAPWKRDVRDALKVQKSPQLLLRVGYTRDYTDPVSVRMPLDRVVSFRAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41738; Mature: 41607
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSRRQFLVRTATCAVLFGLAPGLSACNGVIRHDSRKGEAYDALLGAIGQERTDMLWYA CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEE SLAPSSHNVQPWTVIIDSDRWTIGSASSRWLPAVDPENREMLLSVGAFVENLTLAGSRFG EECCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC IGVRSRVIAQSPNDPELVELQLSKVSPSGYPLERLEKRMTLRGPFQSQEIEASDFSSLID CCHHHHHEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHC GDEGFFYFPPASLEAAWLDEATIAANRQQVKRQDVASELASWIRWSDADARQYRNGLTPE CCCCEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC SMGITGLTGWYVRNFYGRDDVLNQDFRKNTVNRVVSQVAESGGWIVVTSDNGTPSALIQA CCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH GRRFERMLLKARGLSIGIHPMSQVLEEAPWKRDVRDALKVQKSPQLLLRVGYTRDYTDPV HHHHHHHHHHHCCCEEECCHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCC SVRMPLDRVVSFRAG EEECCHHHHHHCCCC >Mature Secondary Structure GLSRRQFLVRTATCAVLFGLAPGLSACNGVIRHDSRKGEAYDALLGAIGQERTDMLWYA CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEE SLAPSSHNVQPWTVIIDSDRWTIGSASSRWLPAVDPENREMLLSVGAFVENLTLAGSRFG EECCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC IGVRSRVIAQSPNDPELVELQLSKVSPSGYPLERLEKRMTLRGPFQSQEIEASDFSSLID CCHHHHHEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHC GDEGFFYFPPASLEAAWLDEATIAANRQQVKRQDVASELASWIRWSDADARQYRNGLTPE CCCCEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC SMGITGLTGWYVRNFYGRDDVLNQDFRKNTVNRVVSQVAESGGWIVVTSDNGTPSALIQA CCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH GRRFERMLLKARGLSIGIHPMSQVLEEAPWKRDVRDALKVQKSPQLLLRVGYTRDYTDPV HHHHHHHHHHHCCCEEECCHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCC SVRMPLDRVVSFRAG EEECCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA