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The map label for this gene is yqiK [H]

Identifier: 194334918

GI number: 194334918

Start: 2304862

End: 2305719

Strand: Reverse

Name: yqiK [H]

Synonym: Paes_2127

Alternate gene names: 194334918

Gene position: 2305719-2304862 (Counterclockwise)

Preceding gene: 194334919

Following gene: 194334917

Centisome position: 91.75

GC content: 51.28

Gene sequence:

>858_bases
ATGTACAGGCATTCCATTGAAATTCATGCCCACAGGGGCGGAAGAGACCTTTTTCCCGAGAATAGTATGTCGGCTTTTCT
CAGGTCGGCTGGTCTTGGCGTCACCGCCATTGAACTTGATCTTGTGATCTCTTCCGATCACAGGATCGTTGTTTCCCATG
ATCCCTGGATGAATGAGCGTCTCTGTCTTTCGCCTGATGGCGCTGAATTGAAAGAGTCCGATCGGGAGCGCTTTCGGCTC
TATGGGATGACATATGAGCAGATCAGGTCGTTTGATTGCGGAAAAGCTGATCCCGATTTTCCTTCGCAGCAGGCAATTGC
AGGTTGTAAGCCCTTGCTTTCGGATGTTTTTGATGCTGTCGAGACGGCATGTGCTTCGAGGGGAAGGCCCGGTTCAATGG
TCTATAACCTCGAAGTGAAATCCTGGCCGGAAAAGGTTGGCGTCTATCATCCGGCACCTGATCTCTATGCGCGTTTTCTT
GTCGATGGTATCATGAGCAGTGGTGTGGAAAGCCGGATAAGGCTTCAGTCTTTTGACGTGCATCTGCTTGATGCGCTCAA
CCGGCTTTTTCCGGGCCTCTCTCTCGGACTGCTTGTTGCACCCGGAGGTGATGTGGAGAAGTTGCTCGCGCAGCTTTCCT
GTGTGCCGGCATTTGTCAATCCATTTTTCAGGGATGTGACCGTCAAGCTTGTCGGTGAGCTTCATGCAAGACAGTTCAGA
ACCGTTCCCTGGACCGTCAATGAAGCCGATGATATGCTCAAACTCATTTCGATGGGCGTCGATGGTTTGATCACCGATTA
TCCTGAACGAGCGGCAGGTATTGCCGGCTTTGCTGCCGATCGGAAAAATCGTGTATGA

Upstream 100 bases:

>100_bases
CGAGTTTGATAAAACGGTTGACGGTTTTAAGCACTGGCTTGTGCGTGAATGATTTTTTTAGACATGCGTGATCGCAGGGG
CTCACAGAGCCCCTTTTTTT

Downstream 100 bases:

>100_bases
AAATGTTACATTAGCCGAATACTTTTTTCCTGTAGTTATTGCAGTTATGAGTCAACCACACAATGCGGTATCTTCGCCCC
TGAAGCCTTTATCGGACCGT

Product: glycerophosphoryl diester phosphodiesterase

Products: alcohol; sn-glycerol 3-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MYRHSIEIHAHRGGRDLFPENSMSAFLRSAGLGVTAIELDLVISSDHRIVVSHDPWMNERLCLSPDGAELKESDRERFRL
YGMTYEQIRSFDCGKADPDFPSQQAIAGCKPLLSDVFDAVETACASRGRPGSMVYNLEVKSWPEKVGVYHPAPDLYARFL
VDGIMSSGVESRIRLQSFDVHLLDALNRLFPGLSLGLLVAPGGDVEKLLAQLSCVPAFVNPFFRDVTVKLVGELHARQFR
TVPWTVNEADDMLKLISMGVDGLITDYPERAAGIAGFAADRKNRV

Sequences:

>Translated_285_residues
MYRHSIEIHAHRGGRDLFPENSMSAFLRSAGLGVTAIELDLVISSDHRIVVSHDPWMNERLCLSPDGAELKESDRERFRL
YGMTYEQIRSFDCGKADPDFPSQQAIAGCKPLLSDVFDAVETACASRGRPGSMVYNLEVKSWPEKVGVYHPAPDLYARFL
VDGIMSSGVESRIRLQSFDVHLLDALNRLFPGLSLGLLVAPGGDVEKLLAQLSCVPAFVNPFFRDVTVKLVGELHARQFR
TVPWTVNEADDMLKLISMGVDGLITDYPERAAGIAGFAADRKNRV
>Mature_285_residues
MYRHSIEIHAHRGGRDLFPENSMSAFLRSAGLGVTAIELDLVISSDHRIVVSHDPWMNERLCLSPDGAELKESDRERFRL
YGMTYEQIRSFDCGKADPDFPSQQAIAGCKPLLSDVFDAVETACASRGRPGSMVYNLEVKSWPEKVGVYHPAPDLYARFL
VDGIMSSGVESRIRLQSFDVHLLDALNRLFPGLSLGLLVAPGGDVEKLLAQLSCVPAFVNPFFRDVTVKLVGELHARQFR
TVPWTVNEADDMLKLISMGVDGLITDYPERAAGIAGFAADRKNRV

Specific function: Unknown

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: 3.1.4.46

Molecular weight: Translated: 31580; Mature: 31580

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRHSIEIHAHRGGRDLFPENSMSAFLRSAGLGVTAIELDLVISSDHRIVVSHDPWMNER
CCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEECCCEEEEECCCCCCCC
LCLSPDGAELKESDRERFRLYGMTYEQIRSFDCGKADPDFPSQQAIAGCKPLLSDVFDAV
EEECCCCCHHHHHHHHHHEEECCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ETACASRGRPGSMVYNLEVKSWPEKVGVYHPAPDLYARFLVDGIMSSGVESRIRLQSFDV
HHHHHHCCCCCCEEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCH
HLLDALNRLFPGLSLGLLVAPGGDVEKLLAQLSCVPAFVNPFFRDVTVKLVGELHARQFR
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TVPWTVNEADDMLKLISMGVDGLITDYPERAAGIAGFAADRKNRV
CCCCCCCCHHHHHHHHHHCCCHHHHCCCHHHHCHHHHHCCCCCCC
>Mature Secondary Structure
MYRHSIEIHAHRGGRDLFPENSMSAFLRSAGLGVTAIELDLVISSDHRIVVSHDPWMNER
CCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEECCCEEEEECCCCCCCC
LCLSPDGAELKESDRERFRLYGMTYEQIRSFDCGKADPDFPSQQAIAGCKPLLSDVFDAV
EEECCCCCHHHHHHHHHHEEECCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ETACASRGRPGSMVYNLEVKSWPEKVGVYHPAPDLYARFLVDGIMSSGVESRIRLQSFDV
HHHHHHCCCCCCEEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCH
HLLDALNRLFPGLSLGLLVAPGGDVEKLLAQLSCVPAFVNPFFRDVTVKLVGELHARQFR
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TVPWTVNEADDMLKLISMGVDGLITDYPERAAGIAGFAADRKNRV
CCCCCCCCHHHHHHHHHHCCCHHHHCCCHHHHCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: glycerophosphodiester; H2O

Specific reaction: A glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 8759838 [H]