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The map label for this gene is nisX1 [H]

Identifier: 194334898

GI number: 194334898

Start: 2285205

End: 2285648

Strand: Reverse

Name: nisX1 [H]

Synonym: Paes_2103

Alternate gene names: 194334898

Gene position: 2285648-2285205 (Counterclockwise)

Preceding gene: 194334899

Following gene: 194334897

Centisome position: 90.96

GC content: 50.9

Gene sequence:

>444_bases
ATGTACCTTATGGCGGTCATCGACCTCAAAAGCCGCTATATACTGAACTGGTCGGTATCAAATACCATGGACGCTGAGTG
GTGCGCGGAAGTCTTCAGAGAGACCGTCAGGTTACACGGTGCCCCAGAGATCCTGAACACCGATCAGGGCTCACAGTTCA
CCAGCGAGGTCTTCACCCGGGCAGTTATCAAAGAAGCCGGATCACAGCTTTCCATGGACGGCAAGGGCAGAGCAATCGAC
AATGTTTTCATCGAACGGTTATGGCGAAGTGTCAAGTATGAGTACATTTACTATAGACCTCCCGTTGACGGGCTGGAACT
CTATCAGGGGCTGAAAGAATGGTTCATCGATTATAATACAGATCGGAGGCATACTGCCCTGAATGATGAGTTCCCAGAGA
CGGTTTACGAGTTTTACAAACCCAGGGCGCCAGAAGCCGCCTGA

Upstream 100 bases:

>100_bases
GAGCTGTATGAGCGGAGACGTTCACGTACAGTTCTGAGAGGGGCTGGGGGTGAAATTCCCTTGGTCTACTCACCCGTATG
TGCCCATGGCTCAAGGCTTC

Downstream 100 bases:

>100_bases
ACAAACTTAGCTTCTTCAACTAGCTGTCCTGCGAATGGGGAGGGGTTCATACACAACAGGGATGTTCAAGACTTTTAGAA
GAATAGGCCCGTCCGTTTTC

Product: Integrase catalytic domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MYLMAVIDLKSRYILNWSVSNTMDAEWCAEVFRETVRLHGAPEILNTDQGSQFTSEVFTRAVIKEAGSQLSMDGKGRAID
NVFIERLWRSVKYEYIYYRPPVDGLELYQGLKEWFIDYNTDRRHTALNDEFPETVYEFYKPRAPEAA

Sequences:

>Translated_147_residues
MYLMAVIDLKSRYILNWSVSNTMDAEWCAEVFRETVRLHGAPEILNTDQGSQFTSEVFTRAVIKEAGSQLSMDGKGRAID
NVFIERLWRSVKYEYIYYRPPVDGLELYQGLKEWFIDYNTDRRHTALNDEFPETVYEFYKPRAPEAA
>Mature_147_residues
MYLMAVIDLKSRYILNWSVSNTMDAEWCAEVFRETVRLHGAPEILNTDQGSQFTSEVFTRAVIKEAGSQLSMDGKGRAID
NVFIERLWRSVKYEYIYYRPPVDGLELYQGLKEWFIDYNTDRRHTALNDEFPETVYEFYKPRAPEAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 17266; Mature: 17266

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLMAVIDLKSRYILNWSVSNTMDAEWCAEVFRETVRLHGAPEILNTDQGSQFTSEVFTR
CEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
AVIKEAGSQLSMDGKGRAIDNVFIERLWRSVKYEYIYYRPPVDGLELYQGLKEWFIDYNT
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCC
DRRHTALNDEFPETVYEFYKPRAPEAA
CCCCCCCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYLMAVIDLKSRYILNWSVSNTMDAEWCAEVFRETVRLHGAPEILNTDQGSQFTSEVFTR
CEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
AVIKEAGSQLSMDGKGRAIDNVFIERLWRSVKYEYIYYRPPVDGLELYQGLKEWFIDYNT
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCC
DRRHTALNDEFPETVYEFYKPRAPEAA
CCCCCCCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]