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The map label for this gene is secY [H]

Identifier: 194334841

GI number: 194334841

Start: 2237784

End: 2239109

Strand: Reverse

Name: secY [H]

Synonym: Paes_2044

Alternate gene names: 194334841

Gene position: 2239109-2237784 (Counterclockwise)

Preceding gene: 194334842

Following gene: 194334840

Centisome position: 89.1

GC content: 48.11

Gene sequence:

>1326_bases
ATGAAGCTGACTGAGAGCTTACAGAATATCAATAAAATCCCGGAATTGCGGCAGCGGATACTCTATACGCTGCTGCTCTT
GTTTATTTACAGACTTGGTTCTCATATCACTATTCCAGGTGTCGATGCTGCAGCGGTAAGTAATGCTTCATCGTCTCATT
CCAATGACCTCTTCGGTCTTTTCGATCTCTTCGTCGGTGGTGCATTTGCCCGAGCCTCGATTTTTTCGCTTGGTATCATG
CCCTACATCTCAGCCTCGATTATCGTTCAGCTTCTCGGAGCGGTCACTCCCTATGTGCAGAAGCTTCAGAAAGAGGGTGA
GGAGGGTCGACAGAAGATTAATCAGTACACCCGATACGGTACGGTACTCATTGCCGCGCTACAGGCGTGGGGCGTGAGCG
TCAGTCTTGCAAGTCCGTCGTCATTCGGAACCATAGTCGTTCCTGACCCCGGCTTTTTCTTCATGATGACGACCGTACTT
ATTCTTACAGCAAGCACTGTTTTTGTGATGTGGCTCGGAGAAAAGATTACCGAGAGGGGTATAGGAAACGGCATCTCCCT
TATCATCATGATCGGTATCCTCGCCAGATTTCCCCAGTCTGTCATCGCGGAGTTTCAATCGGTTTCGCTGGGAAGCAAAA
ACTGGATCATAGAGTTTATTATTCTTGCTCTCATGGTTCTGATTGTTGCAGCTGTCGTGGTCCTTACCGTAGGAACCAGA
AGGATTCCTGTTCAGCATGCAAAAAGGGTTGTCGGTCGCAAAATGTACGGCGGATCGACGCAGTACATTCCTATGCGTGT
CAACACCGCTGGTGTGATGCCCATTATTTTTGCACAGTCGATCATGTTTCTTCCCAATACCTTTCTGTCGTTTTTCCCTG
AGAGCGAAGTGATGCAGAACGTGGCGACGATCTTTTCATACGACTCATGGTGGTACGCCCTGATGTTTGGAACGATGATT
GTCTTCTTTACCTATTTTTATACCGCGATTGCATTCAATCCCAAGGAGGTGGCCGACACCATGCGTCGACAGGGCGGGTT
CATTCCGGGTGTTCGTCCCGGTAAAAGCACCGCTGATTTTATCGACAATATTCTTACGAGAATAACGCTCCCTGGAGCTA
TATCGTTAGCTTTCATAGCTGTTCTGCCGACCTTTTTGACAAAATTTGCAAACGTGACGCCCGGATTCGCTCAATTCTTT
GGCGGAACGAGTCTTCTTATTATTGTCGGTGTCGGACTCGATACCCTTCAGCAGGTAGAAAGCCATCTCCTGATGAGGCA
TTATGACGGATTTATGAAATCAGGCAAAACACGCGGCCGTCGATAA

Upstream 100 bases:

>100_bases
AAGGGATTTATCTACGGACGAGGCTCTTCTTAAACCAAAGGCTAAGCTGAGAAAGTTCAAAAAGCAAAGCAAATCGTCCT
GAACCTCTCATTAATCATGT

Downstream 100 bases:

>100_bases
GCCGCCGTAAAGAGATTGTATGATAACGATTAAAAGTGAACGCGAAATTGATTTGATGAGAGAGTCTGGTGCGGCAACGT
CACTGGTTCTTGATATGATA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MKLTESLQNINKIPELRQRILYTLLLLFIYRLGSHITIPGVDAAAVSNASSSHSNDLFGLFDLFVGGAFARASIFSLGIM
PYISASIIVQLLGAVTPYVQKLQKEGEEGRQKINQYTRYGTVLIAALQAWGVSVSLASPSSFGTIVVPDPGFFFMMTTVL
ILTASTVFVMWLGEKITERGIGNGISLIIMIGILARFPQSVIAEFQSVSLGSKNWIIEFIILALMVLIVAAVVVLTVGTR
RIPVQHAKRVVGRKMYGGSTQYIPMRVNTAGVMPIIFAQSIMFLPNTFLSFFPESEVMQNVATIFSYDSWWYALMFGTMI
VFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKSTADFIDNILTRITLPGAISLAFIAVLPTFLTKFANVTPGFAQFF
GGTSLLIIVGVGLDTLQQVESHLLMRHYDGFMKSGKTRGRR

Sequences:

>Translated_441_residues
MKLTESLQNINKIPELRQRILYTLLLLFIYRLGSHITIPGVDAAAVSNASSSHSNDLFGLFDLFVGGAFARASIFSLGIM
PYISASIIVQLLGAVTPYVQKLQKEGEEGRQKINQYTRYGTVLIAALQAWGVSVSLASPSSFGTIVVPDPGFFFMMTTVL
ILTASTVFVMWLGEKITERGIGNGISLIIMIGILARFPQSVIAEFQSVSLGSKNWIIEFIILALMVLIVAAVVVLTVGTR
RIPVQHAKRVVGRKMYGGSTQYIPMRVNTAGVMPIIFAQSIMFLPNTFLSFFPESEVMQNVATIFSYDSWWYALMFGTMI
VFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKSTADFIDNILTRITLPGAISLAFIAVLPTFLTKFANVTPGFAQFF
GGTSLLIIVGVGLDTLQQVESHLLMRHYDGFMKSGKTRGRR
>Mature_441_residues
MKLTESLQNINKIPELRQRILYTLLLLFIYRLGSHITIPGVDAAAVSNASSSHSNDLFGLFDLFVGGAFARASIFSLGIM
PYISASIIVQLLGAVTPYVQKLQKEGEEGRQKINQYTRYGTVLIAALQAWGVSVSLASPSSFGTIVVPDPGFFFMMTTVL
ILTASTVFVMWLGEKITERGIGNGISLIIMIGILARFPQSVIAEFQSVSLGSKNWIIEFIILALMVLIVAAVVVLTVGTR
RIPVQHAKRVVGRKMYGGSTQYIPMRVNTAGVMPIIFAQSIMFLPNTFLSFFPESEVMQNVATIFSYDSWWYALMFGTMI
VFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKSTADFIDNILTRITLPGAISLAFIAVLPTFLTKFANVTPGFAQFF
GGTSLLIIVGVGLDTLQQVESHLLMRHYDGFMKSGKTRGRR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=428, Percent_Identity=42.0560747663551, Blast_Score=322, Evalue=4e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48564; Mature: 48564

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTESLQNINKIPELRQRILYTLLLLFIYRLGSHITIPGVDAAAVSNASSSHSNDLFGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHH
FDLFVGGAFARASIFSLGIMPYISASIIVQLLGAVTPYVQKLQKEGEEGRQKINQYTRYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TVLIAALQAWGVSVSLASPSSFGTIVVPDPGFFFMMTTVLILTASTVFVMWLGEKITERG
HHHHHHHHHHCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGNGISLIIMIGILARFPQSVIAEFQSVSLGSKNWIIEFIILALMVLIVAAVVVLTVGTR
CCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
RIPVQHAKRVVGRKMYGGSTQYIPMRVNTAGVMPIIFAQSIMFLPNTFLSFFPESEVMQN
CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VATIFSYDSWWYALMFGTMIVFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKSTADF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
IDNILTRITLPGAISLAFIAVLPTFLTKFANVTPGFAQFFGGTSLLIIVGVGLDTLQQVE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEECCHHHHHHHH
SHLLMRHYDGFMKSGKTRGRR
HHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKLTESLQNINKIPELRQRILYTLLLLFIYRLGSHITIPGVDAAAVSNASSSHSNDLFGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHH
FDLFVGGAFARASIFSLGIMPYISASIIVQLLGAVTPYVQKLQKEGEEGRQKINQYTRYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TVLIAALQAWGVSVSLASPSSFGTIVVPDPGFFFMMTTVLILTASTVFVMWLGEKITERG
HHHHHHHHHHCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGNGISLIIMIGILARFPQSVIAEFQSVSLGSKNWIIEFIILALMVLIVAAVVVLTVGTR
CCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
RIPVQHAKRVVGRKMYGGSTQYIPMRVNTAGVMPIIFAQSIMFLPNTFLSFFPESEVMQN
CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VATIFSYDSWWYALMFGTMIVFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKSTADF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
IDNILTRITLPGAISLAFIAVLPTFLTKFANVTPGFAQFFGGTSLLIIVGVGLDTLQQVE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEECCHHHHHHHH
SHLLMRHYDGFMKSGKTRGRR
HHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA