| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is yjjG [C]
Identifier: 194334823
GI number: 194334823
Start: 2222713
End: 2223399
Strand: Reverse
Name: yjjG [C]
Synonym: Paes_2026
Alternate gene names: 194334823
Gene position: 2223399-2222713 (Counterclockwise)
Preceding gene: 194334824
Following gene: 194334822
Centisome position: 88.48
GC content: 57.21
Gene sequence:
>687_bases ATGACGATGACCCTCGCTTTTGATGTTTACGGGACACTGATCGATACGCACGGACTGGTGACAGAACTGCGGGAATTCGC GGGAGACCGGGCCGGAGAGTTTTCGCGTGTCTGGAGGGAGAAACAGCTCGAATACTCCTTCAGACGAGGCCTCATGCACC AGTATGAGACCTTCGCTGTCTGTACCCGCCAGGCGCTCGATTACACCAGTGCGTCTTGCAATGTGTTCCTCACCAGCCAA CAAAAGTCCTTGCTGCTCGACAGGTATGCTGCATTGCCCGCGTTCAGTGACGCAGCATCGGCACTCGACGATCTCAGGGT GGCAGGGTTCCGGTTGTTCGCCTTTTCCAACGGTACGGCAGATGCTGTTGAAACGCTCTTCCACAACGCCGGAATCAGGG AGTATTTTCTCGATGTCCTGAGCGTGGACGACCTCTGTTCTTTCAAGCCCAACCCGGCGGTGTACAGCCATTTCCTGAGG AAGTCCGGTGCAACGGCTGGCAGCGCCTGGCTGATTTCAAGTAATCCGTTTGACGTGATCGGGGCGATCTCGGCAGGCAT GCGGGCTGCGTGGGTCAAGCGTTCACCCGATGCCCTGTTCGATCCGTGGGGGATAGAACCGACACTGACCGTTGCAGGTC TCGAAGAGCTGTGTGGGTGTCTGCAAGCCTCTCTTTCCGGTGAGTGA
Upstream 100 bases:
>100_bases GTATCCGGGTGATTTTGGCTGTCTCTGGCTTCGGGTTTTGACACTATTGCTGTACCTTAATGAGTACTATCAATAGCAAT ATAACCCGGGACAACAGCCT
Downstream 100 bases:
>100_bases ACCGGAGCGGGGCTCTTTGTGGCCGCATTGTCAGCACAGGCGGGAGGAATCGTCAACAGGAAAAAGTCTTTTCTGATATG AACCCTGAAAAAGTCGACAG
Product: haloacid dehalogenase I
Products: NA
Alternate protein names: 2-haloalkanoic acid dehalogenase II; DEHCII; Halocarboxylic acid halidohydrolase II; L-2-haloacid dehalogenase II [H]
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTMTLAFDVYGTLIDTHGLVTELREFAGDRAGEFSRVWREKQLEYSFRRGLMHQYETFAVCTRQALDYTSASCNVFLTSQ QKSLLLDRYAALPAFSDAASALDDLRVAGFRLFAFSNGTADAVETLFHNAGIREYFLDVLSVDDLCSFKPNPAVYSHFLR KSGATAGSAWLISSNPFDVIGAISAGMRAAWVKRSPDALFDPWGIEPTLTVAGLEELCGCLQASLSGE
Sequences:
>Translated_228_residues MTMTLAFDVYGTLIDTHGLVTELREFAGDRAGEFSRVWREKQLEYSFRRGLMHQYETFAVCTRQALDYTSASCNVFLTSQ QKSLLLDRYAALPAFSDAASALDDLRVAGFRLFAFSNGTADAVETLFHNAGIREYFLDVLSVDDLCSFKPNPAVYSHFLR KSGATAGSAWLISSNPFDVIGAISAGMRAAWVKRSPDALFDPWGIEPTLTVAGLEELCGCLQASLSGE >Mature_227_residues TMTLAFDVYGTLIDTHGLVTELREFAGDRAGEFSRVWREKQLEYSFRRGLMHQYETFAVCTRQALDYTSASCNVFLTSQQ KSLLLDRYAALPAFSDAASALDDLRVAGFRLFAFSNGTADAVETLFHNAGIREYFLDVLSVDDLCSFKPNPAVYSHFLRK SGATAGSAWLISSNPFDVIGAISAGMRAAWVKRSPDALFDPWGIEPTLTVAGLEELCGCLQASLSGE
Specific function: Catalyzes the hydrolytic dehalogenation of small (S)-2- haloalkanoic acids to yield the corresponding (R)-2- hydroxyalkanoic acids. Acts on acids of short chain lengths, C(2) to C(4), with inversion of configuration at C-2 [H]
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. S-2- haloalkanoic acid dehalogenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006388 - InterPro: IPR006328 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.8.1.2 [H]
Molecular weight: Translated: 25054; Mature: 24923
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTLAFDVYGTLIDTHGLVTELREFAGDRAGEFSRVWREKQLEYSFRRGLMHQYETFAV CEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CTRQALDYTSASCNVFLTSQQKSLLLDRYAALPAFSDAASALDDLRVAGFRLFAFSNGTA HHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCH DAVETLFHNAGIREYFLDVLSVDDLCSFKPNPAVYSHFLRKSGATAGSAWLISSNPFDVI HHHHHHHHCCCHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHH GAISAGMRAAWVKRSPDALFDPWGIEPTLTVAGLEELCGCLQASLSGE HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TMTLAFDVYGTLIDTHGLVTELREFAGDRAGEFSRVWREKQLEYSFRRGLMHQYETFAV EEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CTRQALDYTSASCNVFLTSQQKSLLLDRYAALPAFSDAASALDDLRVAGFRLFAFSNGTA HHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCH DAVETLFHNAGIREYFLDVLSVDDLCSFKPNPAVYSHFLRKSGATAGSAWLISSNPFDVI HHHHHHHHCCCHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHH GAISAGMRAAWVKRSPDALFDPWGIEPTLTVAGLEELCGCLQASLSGE HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1995594 [H]