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The map label for this gene is fccB [H]

Identifier: 194334683

GI number: 194334683

Start: 2058319

End: 2059545

Strand: Reverse

Name: fccB [H]

Synonym: Paes_1884

Alternate gene names: 194334683

Gene position: 2059545-2058319 (Counterclockwise)

Preceding gene: 194334684

Following gene: 194334682

Centisome position: 81.96

GC content: 49.31

Gene sequence:

>1227_bases
ATGGCTAAAAAAATTGTTGTTCTCGGGGCGGGTACAGGTGGTACGATTGTTTCGAATAACCTCCGGAGACATCTTCCGGA
CGAGTGGGAGATAACGGTTATCGACAGAGATGACAAGCATGTCTACCAGCCGGGACTGCTATTTGTGCCATTCGGGCTCC
AGAAGGTCGGTTCCCTGACGAGATCGAGGAAACGCTACATTTTGAAGGGCGTCAATTTTGTGATCGATGAGATAATCAAT
ATCGACACAGCCAAACGTGAGGTGACAACCAGAAACCATACGTTTTCATATGATTTTCTCGTTATCAGTACCGGCTGCAG
GGTTCTTCCTGAAGAAACCGATGGCATGGAGGAGGCATGGGGAAAAGACGCGTTTACGTTTTACTATCCGGACGCGGCAG
AAACGCTTCGTCAGAAACTCAACGAATTTGACGGAGGAAAACTGGTGATGGATATAGCCGACGTGCCGTTCAAATGCCCG
GTAGCCCCGATTGAATTTGTGTTTCTTGCTGACTGGTTTCTCAAAAAGAAGGGTATACGAAAAAAGAGTGAGATTGAACT
GGTGACACCGCTGCAGGGGGCTTTTACGAAGCCTAAAGCTTCGGCGGTTCTCAGCGAGGCAGCCAGGGAGAAGAATGTCG
GTATGAGAACGGGTTTCCAGCTCAACACGGTTAACGGTAAGGAAAAATATATTGAATCAGTTCAGGGAGAGAAGATCTCC
TTTGATACGCTGGTCGTTGTCCCTACGACCTTTGGCGACAGTGTCATAAGCGATTCGGGTATTGATGACGGGATCGGCTA
TGTTCCGACGCACCACAATACCCTGCAGGCGCTCAAACATGAGCGAGTCTATGTTGTCGGGGATGCTACCAATGTTCCAA
CGTCGAAAGCCGGATCTGTAGCTCACTATGAGGCTGATGTCGTTGTTTTCAATATTATGGCTGAGATTCACGGCGTCAAG
CCGGAAGAGATTTTCGATGGTCACTCGACCTGCTTTATCGTTTACTCGAAAGGCACCTCTTCACTTATTGATTTCAACTA
TAAGATCGAGCCTCTTCCCGGCAAATTCCCTGCGCCTCATCTCGGACCTTTCTCGCTGCTCAGGGAGACGAAGATGAACT
GGAAAGGGAAGCTTGGCTTTGAATGGTTGTACTGGAATGTTTTGTTGGCAGGCCGCCATCTCGGCGCGCCCCCGACCCTT
GTGATGGCAGGTAAAGAGGTTGGGTAA

Upstream 100 bases:

>100_bases
GCGGGCTCTATCTGAGATGCCTGGTTTTTTCTCCGCATGGTGTTCAGGGGCTCGTAAACGTTTGTCCGGAAAACCGGTCA
GCATCTGGAGCGTATGTGTT

Downstream 100 bases:

>100_bases
GCGTGTCTATGCCGCCGTGCCACCACGGCGGCAGTTCTATGCATGGATGCGTTTCGAGGGGCATTCGAGATTGGTCTCTT
TTGTCAGCCAGCAGCACATA

Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase

Products: NA

Alternate protein names: FCSD; Flavocytochrome c flavoprotein subunit; FC [H]

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MAKKIVVLGAGTGGTIVSNNLRRHLPDEWEITVIDRDDKHVYQPGLLFVPFGLQKVGSLTRSRKRYILKGVNFVIDEIIN
IDTAKREVTTRNHTFSYDFLVISTGCRVLPEETDGMEEAWGKDAFTFYYPDAAETLRQKLNEFDGGKLVMDIADVPFKCP
VAPIEFVFLADWFLKKKGIRKKSEIELVTPLQGAFTKPKASAVLSEAAREKNVGMRTGFQLNTVNGKEKYIESVQGEKIS
FDTLVVVPTTFGDSVISDSGIDDGIGYVPTHHNTLQALKHERVYVVGDATNVPTSKAGSVAHYEADVVVFNIMAEIHGVK
PEEIFDGHSTCFIVYSKGTSSLIDFNYKIEPLPGKFPAPHLGPFSLLRETKMNWKGKLGFEWLYWNVLLAGRHLGAPPTL
VMAGKEVG

Sequences:

>Translated_408_residues
MAKKIVVLGAGTGGTIVSNNLRRHLPDEWEITVIDRDDKHVYQPGLLFVPFGLQKVGSLTRSRKRYILKGVNFVIDEIIN
IDTAKREVTTRNHTFSYDFLVISTGCRVLPEETDGMEEAWGKDAFTFYYPDAAETLRQKLNEFDGGKLVMDIADVPFKCP
VAPIEFVFLADWFLKKKGIRKKSEIELVTPLQGAFTKPKASAVLSEAAREKNVGMRTGFQLNTVNGKEKYIESVQGEKIS
FDTLVVVPTTFGDSVISDSGIDDGIGYVPTHHNTLQALKHERVYVVGDATNVPTSKAGSVAHYEADVVVFNIMAEIHGVK
PEEIFDGHSTCFIVYSKGTSSLIDFNYKIEPLPGKFPAPHLGPFSLLRETKMNWKGKLGFEWLYWNVLLAGRHLGAPPTL
VMAGKEVG
>Mature_407_residues
AKKIVVLGAGTGGTIVSNNLRRHLPDEWEITVIDRDDKHVYQPGLLFVPFGLQKVGSLTRSRKRYILKGVNFVIDEIINI
DTAKREVTTRNHTFSYDFLVISTGCRVLPEETDGMEEAWGKDAFTFYYPDAAETLRQKLNEFDGGKLVMDIADVPFKCPV
APIEFVFLADWFLKKKGIRKKSEIELVTPLQGAFTKPKASAVLSEAAREKNVGMRTGFQLNTVNGKEKYIESVQGEKISF
DTLVVVPTTFGDSVISDSGIDDGIGYVPTHHNTLQALKHERVYVVGDATNVPTSKAGSVAHYEADVVVFNIMAEIHGVKP
EEIFDGHSTCFIVYSKGTSSLIDFNYKIEPLPGKFPAPHLGPFSLLRETKMNWKGKLGFEWLYWNVLLAGRHLGAPPTLV
MAGKEVG

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864011, Length=408, Percent_Identity=25.4901960784314, Blast_Score=135, Evalue=8e-32,
Organism=Caenorhabditis elegans, GI17539680, Length=440, Percent_Identity=22.7272727272727, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI115534373, Length=360, Percent_Identity=24.4444444444444, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24657386, Length=373, Percent_Identity=24.6648793565684, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24657391, Length=373, Percent_Identity=24.6648793565684, Blast_Score=120, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016156
- InterPro:   IPR013027
- InterPro:   IPR015323
- InterPro:   IPR015904
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09242 FCSD-flav_bind; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 45329; Mature: 45197

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKIVVLGAGTGGTIVSNNLRRHLPDEWEITVIDRDDKHVYQPGLLFVPFGLQKVGSLT
CCCEEEEEECCCCCCEEECCHHHHCCCCEEEEEEECCCCEEECCCEEEEECCHHHHHHHH
RSRKRYILKGVNFVIDEIINIDTAKREVTTRNHTFSYDFLVISTGCRVLPEETDGMEEAW
HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEEEEEECCCEECCCCCCCHHHHC
GKDAFTFYYPDAAETLRQKLNEFDGGKLVMDIADVPFKCPVAPIEFVFLADWFLKKKGIR
CCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC
KKSEIELVTPLQGAFTKPKASAVLSEAAREKNVGMRTGFQLNTVNGKEKYIESVQGEKIS
CCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCEEE
FDTLVVVPTTFGDSVISDSGIDDGIGYVPTHHNTLQALKHERVYVVGDATNVPTSKAGSV
EEEEEEEECCCCCCHHCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCE
AHYEADVVVFNIMAEIHGVKPEEIFDGHSTCFIVYSKGTSSLIDFNYKIEPLPGKFPAPH
EEEECCEEEEEEHHHHCCCCHHHHCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCC
LGPFSLLRETKMNWKGKLGFEWLYWNVLLAGRHLGAPPTLVMAGKEVG
CCHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
AKKIVVLGAGTGGTIVSNNLRRHLPDEWEITVIDRDDKHVYQPGLLFVPFGLQKVGSLT
CCEEEEEECCCCCCEEECCHHHHCCCCEEEEEEECCCCEEECCCEEEEECCHHHHHHHH
RSRKRYILKGVNFVIDEIINIDTAKREVTTRNHTFSYDFLVISTGCRVLPEETDGMEEAW
HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEEEEEECCCEECCCCCCCHHHHC
GKDAFTFYYPDAAETLRQKLNEFDGGKLVMDIADVPFKCPVAPIEFVFLADWFLKKKGIR
CCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC
KKSEIELVTPLQGAFTKPKASAVLSEAAREKNVGMRTGFQLNTVNGKEKYIESVQGEKIS
CCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCEEE
FDTLVVVPTTFGDSVISDSGIDDGIGYVPTHHNTLQALKHERVYVVGDATNVPTSKAGSV
EEEEEEEECCCCCCHHCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCE
AHYEADVVVFNIMAEIHGVKPEEIFDGHSTCFIVYSKGTSSLIDFNYKIEPLPGKFPAPH
EEEECCEEEEEEHHHHCCCCHHHHCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCC
LGPFSLLRETKMNWKGKLGFEWLYWNVLLAGRHLGAPPTLVMAGKEVG
CCHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8390993; 1649169; 7939681 [H]