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The map label for this gene is 194334526

Identifier: 194334526

GI number: 194334526

Start: 1879106

End: 1879612

Strand: Reverse

Name: 194334526

Synonym: Paes_1721

Alternate gene names: NA

Gene position: 1879612-1879106 (Counterclockwise)

Preceding gene: 194334527

Following gene: 194334525

Centisome position: 74.8

GC content: 48.13

Gene sequence:

>507_bases
ATGCGTCGTTTTATTCCCCTTCTTTCTTCTTGTGTGTTTATTCTGCTGATTGCTTTGGCATCCGTTTTTTCCCCTTTTCC
CCTTTTTATCTACAATACCACAGATAGTCTTCCTCATGGGATCTATCTGGTTGTTCCGCGAGAGTACCGCTATGGTGATC
TTGTTGTGTTCAGGGTCCCTGATGATGTCAGGACTTTGGTTCGTGAGCGACAGTGGCTTCCTGATGATGGCTTTTTGATG
AAGAGGGTTGCCGCTTTGCCAGGGGATCGGGTGAGTACTGCCGGAGGGCACTTTGTTATTGAGGAGAGCGATTACGGGCT
TGTGCTTGATACGGATTCCATGGGTCGTCCGATGCCAGGGTTTGATTTTTGCGGTATTTTGGAGGAGGGCGTTGTCGTCG
CGTTGGCTGGAAGTGGAAACAGCTTTGATTCGAGATATTACGGGCCTCTCCCGGTTGATGCGATTATTGGTGTGGCGTTT
CCATTAGTACTTGGTGATTGTTTTTAA

Upstream 100 bases:

>100_bases
TGATGTTTTGTGCGTTTGCTTTTACGTGTTGAGATCGTATCTGTTCTTTCTATGACGTTTTTTCCTGGTAAACGGGTTTG
ATTGCCCCTGTTCTTGTTTT

Downstream 100 bases:

>100_bases
TTCGTCATAAATCCTTTTTTTATACTTATTTTGCTTGTTTTTCCTTTTGTAAAACGTTATATATCTGCATAGGTATTCAG
TTATGGATGCCTCTCTGAAG

Product: putative conjugal transfer protein

Products: NA

Alternate protein names: Conjugal Transfer Protein TraF; TraF Peptidase; Conjugal Transfer TRAF Transmembrane Protein; Peptidase; Type IV Secretory Pathway Protease TraF-Like Protein; Conjugative Transfer Signal Peptidase TraF; Plasmid Transfer Protein TraF; Type IV Secretory Pathway Protease TraF; Peptidase S; Raf Peptidase. Serine Peptidase. Merops Family; Conjugal Transfer Protein Traf; Conjugal Transfer TraF Transmembrane Protein; Plasmid Transfer Protein Traf; Traf Peptidase Serine Peptidase Merops Family; Transmembrane Anchor Conjugal Transfer Protein; RaF Peptidase. Serine Peptidase. MEROPS Family; TraF Peptidase Serine Peptidase MEROPS Family

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MRRFIPLLSSCVFILLIALASVFSPFPLFIYNTTDSLPHGIYLVVPREYRYGDLVVFRVPDDVRTLVRERQWLPDDGFLM
KRVAALPGDRVSTAGGHFVIEESDYGLVLDTDSMGRPMPGFDFCGILEEGVVVALAGSGNSFDSRYYGPLPVDAIIGVAF
PLVLGDCF

Sequences:

>Translated_168_residues
MRRFIPLLSSCVFILLIALASVFSPFPLFIYNTTDSLPHGIYLVVPREYRYGDLVVFRVPDDVRTLVRERQWLPDDGFLM
KRVAALPGDRVSTAGGHFVIEESDYGLVLDTDSMGRPMPGFDFCGILEEGVVVALAGSGNSFDSRYYGPLPVDAIIGVAF
PLVLGDCF
>Mature_168_residues
MRRFIPLLSSCVFILLIALASVFSPFPLFIYNTTDSLPHGIYLVVPREYRYGDLVVFRVPDDVRTLVRERQWLPDDGFLM
KRVAALPGDRVSTAGGHFVIEESDYGLVLDTDSMGRPMPGFDFCGILEEGVVVALAGSGNSFDSRYYGPLPVDAIIGVAF
PLVLGDCF

Specific function: Unknown

COG id: COG4959

COG function: function code OU; Type IV secretory pathway, protease TraF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18557; Mature: 18557

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFIPLLSSCVFILLIALASVFSPFPLFIYNTTDSLPHGIYLVVPREYRYGDLVVFRVP
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCCCEEEEECC
DDVRTLVRERQWLPDDGFLMKRVAALPGDRVSTAGGHFVIEESDYGLVLDTDSMGRPMPG
HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEECCCCEEEEECCCCEEEEECCCCCCCCCC
FDFCGILEEGVVVALAGSGNSFDSRYYGPLPVDAIIGVAFPLVLGDCF
CHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRFIPLLSSCVFILLIALASVFSPFPLFIYNTTDSLPHGIYLVVPREYRYGDLVVFRVP
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCCCEEEEECC
DDVRTLVRERQWLPDDGFLMKRVAALPGDRVSTAGGHFVIEESDYGLVLDTDSMGRPMPG
HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEECCCCEEEEECCCCEEEEECCCCCCCCCC
FDFCGILEEGVVVALAGSGNSFDSRYYGPLPVDAIIGVAFPLVLGDCF
CHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA