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The map label for this gene is 194334524

Identifier: 194334524

GI number: 194334524

Start: 1877609

End: 1877905

Strand: Reverse

Name: 194334524

Synonym: Paes_1719

Alternate gene names: NA

Gene position: 1877905-1877609 (Counterclockwise)

Preceding gene: 194334525

Following gene: 194334523

Centisome position: 74.73

GC content: 51.85

Gene sequence:

>297_bases
ATGAAGCGGACATTGTTGGCGATTTTTTTTCTTTTTTTCGCAAATACGCTCTTTGGTGCTTCAACCGATATGCCGTGGGA
GGGCCCTCTTGAGAAGTTACTGAATTCATTGACTGGTCCTGTGTCGAGAGTGATCGGTGCGGTGGCTATTGTGTCGCTTG
GGCTCGGGCTGGCGTTTTCGGATGGGGGAAGCGTGATGCGTAAGGCGTTGTGGGTGGTGATGGGGCTTGCGATAGCCTAC
AATGCGGTGAGCTGGGGTCTTGAATTTATGGGTTTTGGTGGAGGACTGAGCGTATGA

Upstream 100 bases:

>100_bases
TGCTGTATAGGCGGGCCTTGATGTTTCAGCTGCTGGTTTGCGTGATATGACCCCCAAGTCAAAACAATAATAACACAATA
CACAAGTAAAGGAGATGTTC

Downstream 100 bases:

>100_bases
TCGAGGGGTATGAGGTGCCTGTTCACCGGTCGTTGACGGATGTGATTCTGCTTGGTGGTGTTCCTCGTACGTTGGCGTTT
CTGTTGTGGACAACGGCAGC

Product: Conjugal transfer protein TrbC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MKRTLLAIFFLFFANTLFGASTDMPWEGPLEKLLNSLTGPVSRVIGAVAIVSLGLGLAFSDGGSVMRKALWVVMGLAIAY
NAVSWGLEFMGFGGGLSV

Sequences:

>Translated_98_residues
MKRTLLAIFFLFFANTLFGASTDMPWEGPLEKLLNSLTGPVSRVIGAVAIVSLGLGLAFSDGGSVMRKALWVVMGLAIAY
NAVSWGLEFMGFGGGLSV
>Mature_98_residues
MKRTLLAIFFLFFANTLFGASTDMPWEGPLEKLLNSLTGPVSRVIGAVAIVSLGLGLAFSDGGSVMRKALWVVMGLAIAY
NAVSWGLEFMGFGGGLSV

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10330; Mature: 10330

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLLAIFFLFFANTLFGASTDMPWEGPLEKLLNSLTGPVSRVIGAVAIVSLGLGLAFS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCC
DGGSVMRKALWVVMGLAIAYNAVSWGLEFMGFGGGLSV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKRTLLAIFFLFFANTLFGASTDMPWEGPLEKLLNSLTGPVSRVIGAVAIVSLGLGLAFS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCC
DGGSVMRKALWVVMGLAIAYNAVSWGLEFMGFGGGLSV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA