| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is yqgC [H]
Identifier: 194334310
GI number: 194334310
Start: 1644940
End: 1645425
Strand: Reverse
Name: yqgC [H]
Synonym: Paes_1503
Alternate gene names: 194334310
Gene position: 1645425-1644940 (Counterclockwise)
Preceding gene: 194334311
Following gene: 194334309
Centisome position: 65.48
GC content: 55.76
Gene sequence:
>486_bases ATGACTGTTTCATTTTTTTTCTGGTTCGTGGCGGCCGTTCTTTTTTCGGCGGGCGTTGCCGGGCTTTTTTTGCCGGCGCT TCCGGGGATTGTGCTTGTCTATGCCGGGCTTGTTGCTGCAGCATGGGCTGAAGGGTTCAGCTATGTCGGGTCCGGCTCGA TTATAGCCATGGGGATGCTTGCTGTATTCGGATATGGCATTGATCTGCTTGCCGGAGTTTTGGGCGCCAGAAGGTTCGGC GCTGGACGCTATGCTGTTATTGGCGCAGGAGCCGGGGGTGTAGTCGGAATGTTTTTCGGGTTGCCCGGTCTTGTTCTGGG CCCGTTTATTGGTGCGGTTTGCGGTGAACTGCTGGCACGCAAAGGCCCTGTTTCGGCTGGAAGGGCGGGTTTCGGGGCGT GGATCGGCATCATTGTCGGGACAGCGGCCAAAATAGCTGTTGTGTTTGCTATGATCGGCGTCTTTATTGCTGCCAGGTTT TTCTGA
Upstream 100 bases:
>100_bases TAATGTTGCAGACTGCGTTATCAAGGGTGCTTTTTTTGTCTGCTGATTTTTCGATAGCCACCGCTGGTAGACGGATTGGC TGTTCAAGGTGGAGATCGAT
Downstream 100 bases:
>100_bases TGGCTTTTTCCGGATCCGGAAGGGGCAATAAACAGTGAGGTAAGGAGATAGGACTATGGCGCTTGGAACCAGTGAACGAT GCCGTTCGGTTCTTCAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTVSFFFWFVAAVLFSAGVAGLFLPALPGIVLVYAGLVAAAWAEGFSYVGSGSIIAMGMLAVFGYGIDLLAGVLGARRFG AGRYAVIGAGAGGVVGMFFGLPGLVLGPFIGAVCGELLARKGPVSAGRAGFGAWIGIIVGTAAKIAVVFAMIGVFIAARF F
Sequences:
>Translated_161_residues MTVSFFFWFVAAVLFSAGVAGLFLPALPGIVLVYAGLVAAAWAEGFSYVGSGSIIAMGMLAVFGYGIDLLAGVLGARRFG AGRYAVIGAGAGGVVGMFFGLPGLVLGPFIGAVCGELLARKGPVSAGRAGFGAWIGIIVGTAAKIAVVFAMIGVFIAARF F >Mature_160_residues TVSFFFWFVAAVLFSAGVAGLFLPALPGIVLVYAGLVAAAWAEGFSYVGSGSIIAMGMLAVFGYGIDLLAGVLGARRFGA GRYAVIGAGAGGVVGMFFGLPGLVLGPFIGAVCGELLARKGPVSAGRAGFGAWIGIIVGTAAKIAVVFAMIGVFIAARFF
Specific function: Unknown
COG id: COG2839
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007403 [H]
Pfam domain/function: PF04306 DUF456 [H]
EC number: NA
Molecular weight: Translated: 16136; Mature: 16004
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSFFFWFVAAVLFSAGVAGLFLPALPGIVLVYAGLVAAAWAEGFSYVGSGSIIAMGML CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AVFGYGIDLLAGVLGARRFGAGRYAVIGAGAGGVVGMFFGLPGLVLGPFIGAVCGELLAR HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHC KGPVSAGRAGFGAWIGIIVGTAAKIAVVFAMIGVFIAARFF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVSFFFWFVAAVLFSAGVAGLFLPALPGIVLVYAGLVAAAWAEGFSYVGSGSIIAMGML CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AVFGYGIDLLAGVLGARRFGAGRYAVIGAGAGGVVGMFFGLPGLVLGPFIGAVCGELLAR HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHC KGPVSAGRAGFGAWIGIIVGTAAKIAVVFAMIGVFIAARFF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]