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The map label for this gene is 194334224

Identifier: 194334224

GI number: 194334224

Start: 1541297

End: 1541923

Strand: Reverse

Name: 194334224

Synonym: Paes_1416

Alternate gene names: NA

Gene position: 1541923-1541297 (Counterclockwise)

Preceding gene: 194334225

Following gene: 194334223

Centisome position: 61.36

GC content: 45.61

Gene sequence:

>627_bases
ATGATTGCAAGTATACTTCGCCTTGGCCCGAAAGAGATAAAGGCTCTGCGTATTACCGATGACTATTCGCTGCACAGGGT
TGTCTACAGTCTCTTTGAAGACCGGAGAAGCGAAGCTGAAAAAAATGCCAGTATTCCGAGCGGCTTTCTCTATGCCGACA
AGGGAGGCGACAGCAACGGTAGACTTATACTCATGCTTTCAGATCGAGAACCTCGCAAACCGGAGCATGGAATTTTAGAA
TCGAAACAGGTTGACGATACATTTCTGATGTTCGACCGTTATCGATTTGATGTCGTTATTAACCCTTCTAAACGTGAAAG
CAAGAGTCGAAAGATTGTTGCTATCCGGGAGCGAAACGAGATTGCGCAATGGTTCAGCGAAAAAGCTCCTGCATCGTGGG
GATTCACGGTAAACTCTGCGACACTCGAAGTCAAAACACTTCCTGTAAAACAATTTGTCAAAAAAGAACATCGTGTCACA
CAAGGAGGGGCGGAATTGACCGGAGAACTTGACGTGGTTGACCGCACTCTTTTCATTAAAAGTTTTAAGCAAGGCATCGG
ACGTGGCAGGGCTTTTGGCTTTGGTCTGCTTCAGATAGCCCCATTAAAAGTTTCATTCACCAACTAA

Upstream 100 bases:

>100_bases
AGCAATTGCTGAAATTTCATTGGGACTGCCAGAGAATCAAAACGCAATGGGCACAGGAATTCTACAGGCAAAATCAGAAA
ATAGAAACAAAGGAGGCTGT

Downstream 100 bases:

>100_bases
CCAGTTGCCATTATGAGCATAACAAATCCATTCAGGAACACCCGAATTGAATATCATATTCTTCAGTCTTTCCCTGTGAC
ATGCCTGAACCGTGACGATG

Product: CRISPR-associated Cse3 family protein

Products: NA

Alternate protein names: CRISPR-Associated Cse3 Family Protein; Crispr-Associated Cse3 Family Protein

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MIASILRLGPKEIKALRITDDYSLHRVVYSLFEDRRSEAEKNASIPSGFLYADKGGDSNGRLILMLSDREPRKPEHGILE
SKQVDDTFLMFDRYRFDVVINPSKRESKSRKIVAIRERNEIAQWFSEKAPASWGFTVNSATLEVKTLPVKQFVKKEHRVT
QGGAELTGELDVVDRTLFIKSFKQGIGRGRAFGFGLLQIAPLKVSFTN

Sequences:

>Translated_208_residues
MIASILRLGPKEIKALRITDDYSLHRVVYSLFEDRRSEAEKNASIPSGFLYADKGGDSNGRLILMLSDREPRKPEHGILE
SKQVDDTFLMFDRYRFDVVINPSKRESKSRKIVAIRERNEIAQWFSEKAPASWGFTVNSATLEVKTLPVKQFVKKEHRVT
QGGAELTGELDVVDRTLFIKSFKQGIGRGRAFGFGLLQIAPLKVSFTN
>Mature_208_residues
MIASILRLGPKEIKALRITDDYSLHRVVYSLFEDRRSEAEKNASIPSGFLYADKGGDSNGRLILMLSDREPRKPEHGILE
SKQVDDTFLMFDRYRFDVVINPSKRESKSRKIVAIRERNEIAQWFSEKAPASWGFTVNSATLEVKTLPVKQFVKKEHRVT
QGGAELTGELDVVDRTLFIKSFKQGIGRGRAFGFGLLQIAPLKVSFTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23592; Mature: 23592

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASILRLGPKEIKALRITDDYSLHRVVYSLFEDRRSEAEKNASIPSGFLYADKGGDSNG
CCCHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
RLILMLSDREPRKPEHGILESKQVDDTFLMFDRYRFDVVINPSKRESKSRKIVAIRERNE
EEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEEEEECHHH
IAQWFSEKAPASWGFTVNSATLEVKTLPVKQFVKKEHRVTQGGAELTGELDVVDRTLFIK
HHHHHHHCCCCCCCEEECCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
SFKQGIGRGRAFGFGLLQIAPLKVSFTN
HHHHHHCCCCEEEEEEEEEEEEEEEECC
>Mature Secondary Structure
MIASILRLGPKEIKALRITDDYSLHRVVYSLFEDRRSEAEKNASIPSGFLYADKGGDSNG
CCCHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
RLILMLSDREPRKPEHGILESKQVDDTFLMFDRYRFDVVINPSKRESKSRKIVAIRERNE
EEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEEEEECHHH
IAQWFSEKAPASWGFTVNSATLEVKTLPVKQFVKKEHRVTQGGAELTGELDVVDRTLFIK
HHHHHHHCCCCCCCEEECCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
SFKQGIGRGRAFGFGLLQIAPLKVSFTN
HHHHHHCCCCEEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA