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The map label for this gene is ygcI [C]

Identifier: 194334222

GI number: 194334222

Start: 1539513

End: 1540244

Strand: Reverse

Name: ygcI [C]

Synonym: Paes_1414

Alternate gene names: 194334222

Gene position: 1540244-1539513 (Counterclockwise)

Preceding gene: 194334223

Following gene: 194334221

Centisome position: 61.29

GC content: 45.49

Gene sequence:

>732_bases
ATGAGTAACGTATACCTCTTGCTTTGGCTTGAAGCACCATTGCAGTCATGGGGGGCTGACTCGAGATTTGGTCGAAGGGG
CACACTCGAATTCCCAACAAAATCAGGTGTACTGGGTATGTTATGCTGTTCCCTTGGTGCAGGTGGTGAGCAAAAAGAGC
TTCTTGAAAAAATGGCTCCGCTAAAACAGTCAGCCATCTCCTTTTGCAGAACCAGTAAATTCAGACAGGAGGAGATAAAA
AAACTCGACAGGGAACCCTTACTGAGGGATTTCCATATGGTAGGCAGCGGCTATGACGACAAGAACCCTTGGGAAACCCT
CCTGATCCCAAAAAAAAGTGATGGAACGACGGCTGTTAATGGCGGTTCAAAAATAACCTACCGGTACTATCTTCAGGATG
CTGTTTTTGCTGTCATCATGGAAGTGCCTTCCGAAAAGTTAACTCTATTCGCTGATGCACTTGAAAATCCATGCTGGGAT
ATTTATTTCGGCAGGAAATGCTGTGCTCCTACGGATTTTATCTATCGAGGATGTTTCAATACTGAATCCCTCGCAATAGG
GAAGGCGCTTGAAATTGCTCAAGAAAAAAGGTTGATGGAGGATTTCAGGGTTGTAGATGGTGAACACGAAGGGGAAGCCA
TCGTCTTGAACGATGTGCCGATACAGTTTGGAGAGCAGAAGCTGTACCGGGAACGCAGAGTAACCGTAATTTCATGTGCA
AATGAAAACTGA

Upstream 100 bases:

>100_bases
CATTATTTGGCAAAGAAAAAGAATTTACTTTCGGCGAGGACGTAAACTTCAGCATTGATGATCTTATTAAGGGATTGAAA
CTAACTGTAGCGGAGGTTCA

Downstream 100 bases:

>100_bases
AAAGATAGTACCCGAGAGCAAGCCATCTCGGTTGCTGATAAAAATCACCCGAGACACCTTACCGCAGGTGAAGGATAAAT
ACCCGTTTCTCTATCTTGAG

Product: CRISPR-associated protein Cas5 family protein

Products: NA

Alternate protein names: CRISPR-Associated Cas5 Family Protein; CRISPR-Associated Protein; CRISPR-Associated Protein Cas5e Family; Cas5 Family CRISPR-Associated Protein; Crispr-Associated Protein; CRISPR-Associated Family Protein; CRISPR-Associated Cse5e Family Protein; CRISPR-Associated Protein CT; CRISPR-Associated Subtype; CRISPR-Associated Ecoli Subtype; CRISPR-Associated Cas5e Family Protein

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSNVYLLLWLEAPLQSWGADSRFGRRGTLEFPTKSGVLGMLCCSLGAGGEQKELLEKMAPLKQSAISFCRTSKFRQEEIK
KLDREPLLRDFHMVGSGYDDKNPWETLLIPKKSDGTTAVNGGSKITYRYYLQDAVFAVIMEVPSEKLTLFADALENPCWD
IYFGRKCCAPTDFIYRGCFNTESLAIGKALEIAQEKRLMEDFRVVDGEHEGEAIVLNDVPIQFGEQKLYRERRVTVISCA
NEN

Sequences:

>Translated_243_residues
MSNVYLLLWLEAPLQSWGADSRFGRRGTLEFPTKSGVLGMLCCSLGAGGEQKELLEKMAPLKQSAISFCRTSKFRQEEIK
KLDREPLLRDFHMVGSGYDDKNPWETLLIPKKSDGTTAVNGGSKITYRYYLQDAVFAVIMEVPSEKLTLFADALENPCWD
IYFGRKCCAPTDFIYRGCFNTESLAIGKALEIAQEKRLMEDFRVVDGEHEGEAIVLNDVPIQFGEQKLYRERRVTVISCA
NEN
>Mature_242_residues
SNVYLLLWLEAPLQSWGADSRFGRRGTLEFPTKSGVLGMLCCSLGAGGEQKELLEKMAPLKQSAISFCRTSKFRQEEIKK
LDREPLLRDFHMVGSGYDDKNPWETLLIPKKSDGTTAVNGGSKITYRYYLQDAVFAVIMEVPSEKLTLFADALENPCWDI
YFGRKCCAPTDFIYRGCFNTESLAIGKALEIAQEKRLMEDFRVVDGEHEGEAIVLNDVPIQFGEQKLYRERRVTVISCAN
EN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27502; Mature: 27371

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVYLLLWLEAPLQSWGADSRFGRRGTLEFPTKSGVLGMLCCSLGAGGEQKELLEKMAP
CCCEEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
LKQSAISFCRTSKFRQEEIKKLDREPLLRDFHMVGSGYDDKNPWETLLIPKKSDGTTAVN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEC
GGSKITYRYYLQDAVFAVIMEVPSEKLTLFADALENPCWDIYFGRKCCAPTDFIYRGCFN
CCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCC
TESLAIGKALEIAQEKRLMEDFRVVDGEHEGEAIVLNDVPIQFGEQKLYRERRVTVISCA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHCHHHHHHHHCEEEEEEC
NEN
CCC
>Mature Secondary Structure 
SNVYLLLWLEAPLQSWGADSRFGRRGTLEFPTKSGVLGMLCCSLGAGGEQKELLEKMAP
CCEEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
LKQSAISFCRTSKFRQEEIKKLDREPLLRDFHMVGSGYDDKNPWETLLIPKKSDGTTAVN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEC
GGSKITYRYYLQDAVFAVIMEVPSEKLTLFADALENPCWDIYFGRKCCAPTDFIYRGCFN
CCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCC
TESLAIGKALEIAQEKRLMEDFRVVDGEHEGEAIVLNDVPIQFGEQKLYRERRVTVISCA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHCHHHHHHHHCEEEEEEC
NEN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA