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The map label for this gene is ybbC [H]

Identifier: 194334172

GI number: 194334172

Start: 1485871

End: 1487133

Strand: Reverse

Name: ybbC [H]

Synonym: Paes_1364

Alternate gene names: 194334172

Gene position: 1487133-1485871 (Counterclockwise)

Preceding gene: 194334173

Following gene: 194334164

Centisome position: 59.18

GC content: 49.88

Gene sequence:

>1263_bases
GTGTACTTTTACTCTGAACCGTTACTTTTTCTGGGGATTGATCGACTCATGAAACGTGTATTGAACGCATTGCTTTTCTC
TTTCTTGCTGTCGCTGCTCTGTTCGACACTCAATGCGGCGTCGTTCCGCTATGGGCTTGATGTTCTTGATGATGATGCAT
GCGCTTTTCTGGAAGGTTCCAGAGTAGGCCTTATTACCAATAAGGCTGGTATCAGCAGTGCCGGTGAATCCAATTACCGC
CTTTTTCTTCGACACGGGGTCGATCTCAGATTTCTCATGGCTCCTGAGCACGGATTCAATGTTGATGTTGCTGCCGGCGC
AACAGTCAGGGATTCCCGTACGTCCGGTTCGCTGAAAGTATATTCCCTGTACGGGTCTTCGAAAAAACCGGACAGGAATC
TTCTCAATACTATCGATATCCTTATTTTCGATCTTCAGGATATAGGGACCCGTTGCTACACCTATATTTCTACAATGTTC
TATGCAATGGAAGCTGCTGAAGATGCCGGAATCAGATTTATGGTTCTTGATCGCCCAAACCCCATAGCCCCTGTTCCTGC
TGACGGGTTTCAGCTTGACCCGGATTGCCGTTCATTCGTGGGGATTGTTCCGGTGCCTTTTATTCATGCCATGACGGTTG
GTGAGCTTGCTTTATGGATGAAAAAACATTTCTTCTCGTCGCTTCGTCTCGATGTGATCAGAATGAAGGGGTATGATCGA
CATCTGTTTGCCGATGAACTTCATGGTTTTCGTTTTATTTCACCTTCGCCAAACATTGGCAGTGTTGAAACTGCGCTTGT
CTATCCTGCCACGGTTTTTCTCGAAGCAACCAATATCAGCGAAGGTCGCGGGACGGATCAGCCGTTCCGGCAGTTCGGTG
CTGTCTTTATCGATTCAGGCGCATTAAAGCGCGCTCTCGATGATTTCAGGCTTCCAGGGGTACGTTTTACTGCGGTTTCG
TTCCGGCCTTCTGCAAGCAAGTATAAGGGGCTTGCATGCAGTGGCGTGAGGCTTGATGTGACCGACCGCATGGTGTTCGA
GCCTTTCAGGACAGGGGTCGCTCTGCTGGTCGCGCTTCATACGCTCTATCCCGGGTTGCTCGATCTGGAATCGCACGGGG
AGTTTTTCGATAAACTTGCCGGGACGCCGCTCTTGCGCAGGATGCTTTTGACCGGCTGCTCCCTTGAGGAGATTCTGGCG
GCTTCGCGTCTTCAGGTTCATGAGTTTGAGGAGGCTAATCCGCAACGCTTTATCTATCCCTGA

Upstream 100 bases:

>100_bases
TGTCTGATACCTTTATTTGTTAGGCCCTCTTCTTGTTTTTCAATCCGATGGCAAGGCTTTGCCGGTTTCTACCGCCTATC
ACGCACGACAGGAGGATGAG

Downstream 100 bases:

>100_bases
TTCGCTCTTCAGATTTCGCGTTCTACCCTGAACGGCCCTACAATTCCCTGATGGGAGAGCAGTAGCTGCCATAACTGAAG
CGTTCTTGCCAGAAAAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MYFYSEPLLFLGIDRLMKRVLNALLFSFLLSLLCSTLNAASFRYGLDVLDDDACAFLEGSRVGLITNKAGISSAGESNYR
LFLRHGVDLRFLMAPEHGFNVDVAAGATVRDSRTSGSLKVYSLYGSSKKPDRNLLNTIDILIFDLQDIGTRCYTYISTMF
YAMEAAEDAGIRFMVLDRPNPIAPVPADGFQLDPDCRSFVGIVPVPFIHAMTVGELALWMKKHFFSSLRLDVIRMKGYDR
HLFADELHGFRFISPSPNIGSVETALVYPATVFLEATNISEGRGTDQPFRQFGAVFIDSGALKRALDDFRLPGVRFTAVS
FRPSASKYKGLACSGVRLDVTDRMVFEPFRTGVALLVALHTLYPGLLDLESHGEFFDKLAGTPLLRRMLLTGCSLEEILA
ASRLQVHEFEEANPQRFIYP

Sequences:

>Translated_420_residues
MYFYSEPLLFLGIDRLMKRVLNALLFSFLLSLLCSTLNAASFRYGLDVLDDDACAFLEGSRVGLITNKAGISSAGESNYR
LFLRHGVDLRFLMAPEHGFNVDVAAGATVRDSRTSGSLKVYSLYGSSKKPDRNLLNTIDILIFDLQDIGTRCYTYISTMF
YAMEAAEDAGIRFMVLDRPNPIAPVPADGFQLDPDCRSFVGIVPVPFIHAMTVGELALWMKKHFFSSLRLDVIRMKGYDR
HLFADELHGFRFISPSPNIGSVETALVYPATVFLEATNISEGRGTDQPFRQFGAVFIDSGALKRALDDFRLPGVRFTAVS
FRPSASKYKGLACSGVRLDVTDRMVFEPFRTGVALLVALHTLYPGLLDLESHGEFFDKLAGTPLLRRMLLTGCSLEEILA
ASRLQVHEFEEANPQRFIYP
>Mature_420_residues
MYFYSEPLLFLGIDRLMKRVLNALLFSFLLSLLCSTLNAASFRYGLDVLDDDACAFLEGSRVGLITNKAGISSAGESNYR
LFLRHGVDLRFLMAPEHGFNVDVAAGATVRDSRTSGSLKVYSLYGSSKKPDRNLLNTIDILIFDLQDIGTRCYTYISTMF
YAMEAAEDAGIRFMVLDRPNPIAPVPADGFQLDPDCRSFVGIVPVPFIHAMTVGELALWMKKHFFSSLRLDVIRMKGYDR
HLFADELHGFRFISPSPNIGSVETALVYPATVFLEATNISEGRGTDQPFRQFGAVFIDSGALKRALDDFRLPGVRFTAVS
FRPSASKYKGLACSGVRLDVTDRMVFEPFRTGVALLVALHTLYPGLLDLESHGEFFDKLAGTPLLRRMLLTGCSLEEILA
ASRLQVHEFEEANPQRFIYP

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 46802; Mature: 46802

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFYSEPLLFLGIDRLMKRVLNALLFSFLLSLLCSTLNAASFRYGLDVLDDDACAFLEGS
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEECCC
RVGLITNKAGISSAGESNYRLFLRHGVDLRFLMAPEHGFNVDVAAGATVRDSRTSGSLKV
EEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEECCCEEECCCCCCCEEE
YSLYGSSKKPDRNLLNTIDILIFDLQDIGTRCYTYISTMFYAMEAAEDAGIRFMVLDRPN
EEEECCCCCCCHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
PIAPVPADGFQLDPDCRSFVGIVPVPFIHAMTVGELALWMKKHFFSSLRLDVIRMKGYDR
CCCCCCCCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCC
HLFADELHGFRFISPSPNIGSVETALVYPATVFLEATNISEGRGTDQPFRQFGAVFIDSG
CHHHHHHCCEEEECCCCCCCCCEEHEEEEEEEEEEECCCCCCCCCCHHHHHHCCEEECCH
ALKRALDDFRLPGVRFTAVSFRPSASKYKGLACSGVRLDVTDRMVFEPFRTGVALLVALH
HHHHHHHHHCCCCEEEEEEEECCCHHHCCCEEECCEEEECCHHHHHHHHHHHHHHHHHHH
TLYPGLLDLESHGEFFDKLAGTPLLRRMLLTGCSLEEILAASRLQVHEFEEANPQRFIYP
HHCCCCEEEHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCC
>Mature Secondary Structure
MYFYSEPLLFLGIDRLMKRVLNALLFSFLLSLLCSTLNAASFRYGLDVLDDDACAFLEGS
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEECCC
RVGLITNKAGISSAGESNYRLFLRHGVDLRFLMAPEHGFNVDVAAGATVRDSRTSGSLKV
EEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEECCCEEECCCCCCCEEE
YSLYGSSKKPDRNLLNTIDILIFDLQDIGTRCYTYISTMFYAMEAAEDAGIRFMVLDRPN
EEEECCCCCCCHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
PIAPVPADGFQLDPDCRSFVGIVPVPFIHAMTVGELALWMKKHFFSSLRLDVIRMKGYDR
CCCCCCCCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCC
HLFADELHGFRFISPSPNIGSVETALVYPATVFLEATNISEGRGTDQPFRQFGAVFIDSG
CHHHHHHCCEEEECCCCCCCCCEEHEEEEEEEEEEECCCCCCCCCCHHHHHHCCEEECCH
ALKRALDDFRLPGVRFTAVSFRPSASKYKGLACSGVRLDVTDRMVFEPFRTGVALLVALH
HHHHHHHHHCCCCEEEEEEEECCCHHHCCCEEECCEEEECCHHHHHHHHHHHHHHHHHHH
TLYPGLLDLESHGEFFDKLAGTPLLRRMLLTGCSLEEILAASRLQVHEFEEANPQRFIYP
HHCCCCEEEHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]