| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194333993
Identifier: 194333993
GI number: 194333993
Start: 1286233
End: 1286784
Strand: Reverse
Name: 194333993
Synonym: Paes_1177
Alternate gene names: NA
Gene position: 1286784-1286233 (Counterclockwise)
Preceding gene: 194334000
Following gene: 194333992
Centisome position: 51.21
GC content: 49.28
Gene sequence:
>552_bases ATGTCGATAATTTCCGTTGAAAACGTTCTTGTTGAAAAGGATGTTACAACAGCTTGTTTCCGTTGCAACCTTGGCCTTTG CCATGGGGCCTGCTGTGTTGAAGGCGAGCTTGGCGCTCCACTCAAAACAGAGGAGGTTGCCGCTCTGGAGGATGGCGTGG AGCTCCTGCGGGACCGGCTTCCGGAAAAAAACCTGCGATATATACGGCGCTACGGCTGCATCGAGGTGTATCAGGGGGAT ATTTATACCAGAACGATTGATGGCGGCGAGTGCGTTTTTGCTGTCAAGAATGGCACAACTACCCTGTGCGCCATCGAAGA GGCTATGCTCGATGGGGTGAATATCGCCAGGAAACCGCTTTCCTGCAGGCTCTTTCCTATTAGGGTGCGAAAAAAATTCG GTTTGGATTATCTTGTCTATGAACAGCATTACATGTGTCGTCATGCGAGGAAGGAGGGAACGCAGAACAGTGTGCTGCTT GTTGACTTTCTGAAGGATGTGCTTGAAGATGCCTATGGAACCTCATTTTACAACCGTTTGAAGGATTTTTAG
Upstream 100 bases:
>100_bases CTGTCCCCGATGGTTTTGTGTTGTTGTGATCTGCCGTTTGTTTTGAATTTACGTTCTTGTATACATTATTTTCAGGTTTT TCTCCAAAAAATTCTTTCCG
Downstream 100 bases:
>100_bases TACCATTAGTACCAGTCAATACTCCCATGACCAATGCCAGACTTTAAGCTTCAGCAAAGCCAGAGGGCCCAGCTTTCTGC ACAGCAGATTCTTTCGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSIISVENVLVEKDVTTACFRCNLGLCHGACCVEGELGAPLKTEEVAALEDGVELLRDRLPEKNLRYIRRYGCIEVYQGD IYTRTIDGGECVFAVKNGTTTLCAIEEAMLDGVNIARKPLSCRLFPIRVRKKFGLDYLVYEQHYMCRHARKEGTQNSVLL VDFLKDVLEDAYGTSFYNRLKDF
Sequences:
>Translated_183_residues MSIISVENVLVEKDVTTACFRCNLGLCHGACCVEGELGAPLKTEEVAALEDGVELLRDRLPEKNLRYIRRYGCIEVYQGD IYTRTIDGGECVFAVKNGTTTLCAIEEAMLDGVNIARKPLSCRLFPIRVRKKFGLDYLVYEQHYMCRHARKEGTQNSVLL VDFLKDVLEDAYGTSFYNRLKDF >Mature_182_residues SIISVENVLVEKDVTTACFRCNLGLCHGACCVEGELGAPLKTEEVAALEDGVELLRDRLPEKNLRYIRRYGCIEVYQGDI YTRTIDGGECVFAVKNGTTTLCAIEEAMLDGVNIARKPLSCRLFPIRVRKKFGLDYLVYEQHYMCRHARKEGTQNSVLLV DFLKDVLEDAYGTSFYNRLKDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20733; Mature: 20602
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIISVENVLVEKDVTTACFRCNLGLCHGACCVEGELGAPLKTEEVAALEDGVELLRDRL CCEEEHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC PEKNLRYIRRYGCIEVYQGDIYTRTIDGGECVFAVKNGTTTLCAIEEAMLDGVNIARKPL CHHHHHHHHHCCCEEEEECCEEEEEECCCEEEEEECCCCEEEEHHHHHHHCCCHHHCCCC SCRLFPIRVRKKFGLDYLVYEQHYMCRHARKEGTQNSVLLVDFLKDVLEDAYGTSFYNRL CEEEEEEEEHHHHCCEEEEHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCHHHHHHH KDF HCC >Mature Secondary Structure SIISVENVLVEKDVTTACFRCNLGLCHGACCVEGELGAPLKTEEVAALEDGVELLRDRL CEEEHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC PEKNLRYIRRYGCIEVYQGDIYTRTIDGGECVFAVKNGTTTLCAIEEAMLDGVNIARKPL CHHHHHHHHHCCCEEEEECCEEEEEECCCEEEEEECCCCEEEEHHHHHHHCCCHHHCCCC SCRLFPIRVRKKFGLDYLVYEQHYMCRHARKEGTQNSVLLVDFLKDVLEDAYGTSFYNRL CEEEEEEEEHHHHCCEEEEHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCHHHHHHH KDF HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA