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The map label for this gene is yqjC [H]

Identifier: 194333709

GI number: 194333709

Start: 957838

End: 958242

Strand: Reverse

Name: yqjC [H]

Synonym: Paes_0877

Alternate gene names: 194333709

Gene position: 958242-957838 (Counterclockwise)

Preceding gene: 194333710

Following gene: 194333708

Centisome position: 38.13

GC content: 46.67

Gene sequence:

>405_bases
ATGATTTCCAACATCGACCATATCGCCATAGCGGTCAATGATCTCGACAGTGCTATCCAGCAATTTAGCGCACTGACAGG
AATAGATCCGGAATCGGTTCACATTGAGCAAGTCCCGTCGGAAAAAGTCAGGGTAGCCTTTATTGCTCTGGGATCATCTA
AAATCGAACTCCTCGAGCCACTCGACAGATCAGGGCCGATCGCGACATTTCTTGAAAAACGAGGAGAGGGCCTGCACCAC
ATAGCTCTGGAAACAGCAAACCTTGACAAAGAGCTCGAAAGAACCCAGAAGGAAAACCTGCACCCCCTTTCATCTCCATC
TACGGGTGCAGGGAAGAAAAAAATTGTATTTTTCAACCCGAAAGACACAAGCAGGGTTCTTATAGAATTTGTCCAGAAGA
TGTAA

Upstream 100 bases:

>100_bases
CTGTCGGCTACCCGAAGTAATGTTTGAGCCTGCCCGGACAGAATGCAATCTGTCCGGGCAGGTTCAATCGTTCAGCAACG
CAACAAGTCAATACTCTTCC

Downstream 100 bases:

>100_bases
CCGTCATCCATCCATCGTGAAGCATTTTTATCTGCCTTTTGAAAAAAAACAGGATTTCGATTATTCGGCAGCCGCTATCG
AAAAGTTGAGCGAATATGAA

Product: methylmalonyl-CoA epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MISNIDHIAIAVNDLDSAIQQFSALTGIDPESVHIEQVPSEKVRVAFIALGSSKIELLEPLDRSGPIATFLEKRGEGLHH
IALETANLDKELERTQKENLHPLSSPSTGAGKKKIVFFNPKDTSRVLIEFVQKM

Sequences:

>Translated_134_residues
MISNIDHIAIAVNDLDSAIQQFSALTGIDPESVHIEQVPSEKVRVAFIALGSSKIELLEPLDRSGPIATFLEKRGEGLHH
IALETANLDKELERTQKENLHPLSSPSTGAGKKKIVFFNPKDTSRVLIEFVQKM
>Mature_134_residues
MISNIDHIAIAVNDLDSAIQQFSALTGIDPESVHIEQVPSEKVRVAFIALGSSKIELLEPLDRSGPIATFLEKRGEGLHH
IALETANLDKELERTQKENLHPLSSPSTGAGKKKIVFFNPKDTSRVLIEFVQKM

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family [H]

Homologues:

Organism=Homo sapiens, GI188035928, Length=134, Percent_Identity=37.3134328358209, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17506387, Length=135, Percent_Identity=32.5925925925926, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 14768; Mature: 14768

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNIDHIAIAVNDLDSAIQQFSALTGIDPESVHIEQVPSEKVRVAFIALGSSKIELLEP
CCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCEEHCCCCCCCEEEEEEEECCCCCHHHCC
LDRSGPIATFLEKRGEGLHHIALETANLDKELERTQKENLHPLSSPSTGAGKKKIVFFNP
CCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECC
KDTSRVLIEFVQKM
CCHHHHHHHHHHHC
>Mature Secondary Structure
MISNIDHIAIAVNDLDSAIQQFSALTGIDPESVHIEQVPSEKVRVAFIALGSSKIELLEP
CCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCEEHCCCCCCCEEEEEEEECCCCCHHHCC
LDRSGPIATFLEKRGEGLHHIALETANLDKELERTQKENLHPLSSPSTGAGKKKIVFFNP
CCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECC
KDTSRVLIEFVQKM
CCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]