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The map label for this gene is accD [H]

Identifier: 194333708

GI number: 194333708

Start: 956046

End: 957821

Strand: Reverse

Name: accD [H]

Synonym: Paes_0876

Alternate gene names: 194333708

Gene position: 957821-956046 (Counterclockwise)

Preceding gene: 194333709

Following gene: 194333707

Centisome position: 38.12

GC content: 50.79

Gene sequence:

>1776_bases
GTGAAGCATTTTTATCTGCCTTTTGAAAAAAAACAGGATTTCGATTATTCGGCAGCCGCTATCGAAAAGTTGAGCGAATA
TGAAAAATATCAGCTCTCGTTCCATCCCGAACGACCGAAATACCTCGATTATCTTCAGGTTTTCAAAAACGTTGAGCCCT
GCTTTGAAAGCAACCTCCATGGCTCAAACCTGATCCAGACGCACCGTGCAGTTCTTGACACTGCGTCCGGGCCAGTCAAG
GTCATGCTTGTGGGTCAGCAATCCTCACCGACCTCGAACTTTGAGCAACTCCAGCAGTTGATGCGCAAGAACGGCACCGC
AGAACAATGGAACCAGGGCATGCCGACGCCAGCATCATATGAACGCGCGCTCAAGGCAATAAAGCTTGCAGAAAAGGAAG
CACGCCTGATTATCACCATGATCGACACCCCTGGCGCTGACCCGACCGAAGAAGCGGAATCAGGAGGTATAGCATGGAAA
ATAGGTCATTGCATGCAGGCTCTTGCAGAAGCATCCGTCCCGACCATTTCGGTCATCATGAACCGCGGTTGCAGCGGAGG
AGCGATCGCTCTGACCGGATGCGATATTGTTCTTGCTATGGAGTACTCGACCTATCTGGTCATCTCTCCCGAGGCATGCT
CGTCAATTCTTTTCAGAACGAGAGACAAAGCAAACCTGGCAGCCGAAATCTCCCAGATAACCTCAAAAGAAGCGCTCCAC
CACAAGATCATCGACGCAATCATCGCTGAACCTGATGGACCTGCTCACCGTTTCCCTCAATCGGCTATTGCATCGTTGCG
CGCATCACTCTGCAACCATATTGAGCAGCTGAGTGCGATACCGCAGGAGGAGGTGTTTGATGCCCGTGTTCAGCGTTGGA
AACAGATAGGCAGATGGGACAGGATCACCGAAGAAGAGATCGCTTCTTTCGAACAACACCGATCCCGTCGGATTGCCAGG
CCCGAAGGGAATATGTTCGTTCAACGCCATAAAGGATGCCGAGGCAGCGATGGAAAAAGGATCTACGACCCCGTTCTCTA
CTCTGCGCTTATAGACGACAATTATGTATGCAAAGATTGCGGCTACCGCTACACCCGGCTGTCGGCGTATGACTATATCG
ACATCGTGCTCGACCAGGGATCGTTCCGCGAACATGAGGCTACGCGCCACCTTGTCGATCTCGATATTCTCGGATTCCCG
GGCTACAGCCAGAAAATCCTTGAGGAAAGAAAGAAAACCGGTATCGCATCTGCCCTTCTTACAGGAGACGGCACTGTCGG
CGGTAAGCCTGTGGTTATATGCGTAACCGATTTCGGATTCCTCGGCGGTTCATTCTGTATGTCAACCGGTGAAAAAATCT
GGCAGGCATCTCAGATAGCACTCGACAGGAAATGTCCAATCATTATTCAGGCAGCAGGAGGAGGTGCCCGCATGCATGAA
GGGTGCTCCTCGATGGTCAGCATACCGAAAATTCATGTTGCGCTCTCCAGAGTTGAAAAAGCCGGTATCCCCGTCCTCAC
CATCATCACCGACCCGACCCTTGGCGGCGTCGCTATAGGCTTCGGTTCCAGAGGGATTCAACTGTTTGAACACAAAGCCG
GAAACATTGGTTTTTCAGGTAAACGCGTCATCGAACAATACACGGGCAAAAAAACATCCCATGACTTTCAGACGACAACG
TGGCTCCAGGAGAAAGGCTACGCCAATCACATCGTCAATCCCATGTCGATGCACATGGATATTGAAGCAATAATCAATGA
CTTCTATCGCAATTAA

Upstream 100 bases:

>100_bases
ACGGGTGCAGGGAAGAAAAAAATTGTATTTTTCAACCCGAAAGACACAAGCAGGGTTCTTATAGAATTTGTCCAGAAGAT
GTAACCGTCATCCATCCATC

Downstream 100 bases:

>100_bases
CTCCTATCTCGCCATATCGTATGTTTGAGGAATTCAGCCCGGTCAGCAAAGAACAGTGGAAAGAGCGGCTTATACAAGAG
CTCAAAGGAAGCGATTATGA

Product: acetyl-CoA carboxylase subunit alpha-like protein

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MKHFYLPFEKKQDFDYSAAAIEKLSEYEKYQLSFHPERPKYLDYLQVFKNVEPCFESNLHGSNLIQTHRAVLDTASGPVK
VMLVGQQSSPTSNFEQLQQLMRKNGTAEQWNQGMPTPASYERALKAIKLAEKEARLIITMIDTPGADPTEEAESGGIAWK
IGHCMQALAEASVPTISVIMNRGCSGGAIALTGCDIVLAMEYSTYLVISPEACSSILFRTRDKANLAAEISQITSKEALH
HKIIDAIIAEPDGPAHRFPQSAIASLRASLCNHIEQLSAIPQEEVFDARVQRWKQIGRWDRITEEEIASFEQHRSRRIAR
PEGNMFVQRHKGCRGSDGKRIYDPVLYSALIDDNYVCKDCGYRYTRLSAYDYIDIVLDQGSFREHEATRHLVDLDILGFP
GYSQKILEERKKTGIASALLTGDGTVGGKPVVICVTDFGFLGGSFCMSTGEKIWQASQIALDRKCPIIIQAAGGGARMHE
GCSSMVSIPKIHVALSRVEKAGIPVLTIITDPTLGGVAIGFGSRGIQLFEHKAGNIGFSGKRVIEQYTGKKTSHDFQTTT
WLQEKGYANHIVNPMSMHMDIEAIINDFYRN

Sequences:

>Translated_591_residues
MKHFYLPFEKKQDFDYSAAAIEKLSEYEKYQLSFHPERPKYLDYLQVFKNVEPCFESNLHGSNLIQTHRAVLDTASGPVK
VMLVGQQSSPTSNFEQLQQLMRKNGTAEQWNQGMPTPASYERALKAIKLAEKEARLIITMIDTPGADPTEEAESGGIAWK
IGHCMQALAEASVPTISVIMNRGCSGGAIALTGCDIVLAMEYSTYLVISPEACSSILFRTRDKANLAAEISQITSKEALH
HKIIDAIIAEPDGPAHRFPQSAIASLRASLCNHIEQLSAIPQEEVFDARVQRWKQIGRWDRITEEEIASFEQHRSRRIAR
PEGNMFVQRHKGCRGSDGKRIYDPVLYSALIDDNYVCKDCGYRYTRLSAYDYIDIVLDQGSFREHEATRHLVDLDILGFP
GYSQKILEERKKTGIASALLTGDGTVGGKPVVICVTDFGFLGGSFCMSTGEKIWQASQIALDRKCPIIIQAAGGGARMHE
GCSSMVSIPKIHVALSRVEKAGIPVLTIITDPTLGGVAIGFGSRGIQLFEHKAGNIGFSGKRVIEQYTGKKTSHDFQTTT
WLQEKGYANHIVNPMSMHMDIEAIINDFYRN
>Mature_591_residues
MKHFYLPFEKKQDFDYSAAAIEKLSEYEKYQLSFHPERPKYLDYLQVFKNVEPCFESNLHGSNLIQTHRAVLDTASGPVK
VMLVGQQSSPTSNFEQLQQLMRKNGTAEQWNQGMPTPASYERALKAIKLAEKEARLIITMIDTPGADPTEEAESGGIAWK
IGHCMQALAEASVPTISVIMNRGCSGGAIALTGCDIVLAMEYSTYLVISPEACSSILFRTRDKANLAAEISQITSKEALH
HKIIDAIIAEPDGPAHRFPQSAIASLRASLCNHIEQLSAIPQEEVFDARVQRWKQIGRWDRITEEEIASFEQHRSRRIAR
PEGNMFVQRHKGCRGSDGKRIYDPVLYSALIDDNYVCKDCGYRYTRLSAYDYIDIVLDQGSFREHEATRHLVDLDILGFP
GYSQKILEERKKTGIASALLTGDGTVGGKPVVICVTDFGFLGGSFCMSTGEKIWQASQIALDRKCPIIIQAAGGGARMHE
GCSSMVSIPKIHVALSRVEKAGIPVLTIITDPTLGGVAIGFGSRGIQLFEHKAGNIGFSGKRVIEQYTGKKTSHDFQTTT
WLQEKGYANHIVNPMSMHMDIEAIINDFYRN

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family [H]

Homologues:

Organism=Escherichia coli, GI1786382, Length=278, Percent_Identity=34.8920863309352, Blast_Score=152, Evalue=5e-38,
Organism=Escherichia coli, GI1788655, Length=246, Percent_Identity=35.7723577235772, Blast_Score=146, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.2 [H]

Molecular weight: Translated: 65647; Mature: 65647

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS50980 COA_CT_NTER ; PS50989 COA_CT_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHFYLPFEKKQDFDYSAAAIEKLSEYEKYQLSFHPERPKYLDYLQVFKNVEPCFESNLH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCHHHHCCCC
GSNLIQTHRAVLDTASGPVKVMLVGQQSSPTSNFEQLQQLMRKNGTAEQWNQGMPTPASY
CCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCHHH
ERALKAIKLAEKEARLIITMIDTPGADPTEEAESGGIAWKIGHCMQALAEASVPTISVIM
HHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHCCCCEEEHHHHHHHHHHCCCCEEEHHH
NRGCSGGAIALTGCDIVLAMEYSTYLVISPEACSSILFRTRDKANLAAEISQITSKEALH
HCCCCCCEEEEECCEEEEEEECCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
HKIIDAIIAEPDGPAHRFPQSAIASLRASLCNHIEQLSAIPQEEVFDARVQRWKQIGRWD
HHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
RITEEEIASFEQHRSRRIARPEGNMFVQRHKGCRGSDGKRIYDPVLYSALIDDNYVCKDC
CCCHHHHHHHHHHHHCCCCCCCCCEEHEECCCCCCCCCCCHHHHHHHHHHHCCCCEEHHC
GYRYTRLSAYDYIDIVLDQGSFREHEATRHLVDLDILGFPGYSQKILEERKKTGIASALL
CCCEEEECCCCEEEEEECCCCCCHHHHHHHEEEEEEECCCCCHHHHHHHHHHCCHHHEEE
TGDGTVGGKPVVICVTDFGFLGGSFCMSTGEKIWQASQIALDRKCPIIIQAAGGGARMHE
ECCCCCCCCEEEEEEECCCHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH
GCSSMVSIPKIHVALSRVEKAGIPVLTIITDPTLGGVAIGFGSRGIQLFEHKAGNIGFSG
HHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCHHHHCCCCCCCCCH
KRVIEQYTGKKTSHDFQTTTWLQEKGYANHIVNPMSMHMDIEAIINDFYRN
HHHHHHHCCCCCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHFYLPFEKKQDFDYSAAAIEKLSEYEKYQLSFHPERPKYLDYLQVFKNVEPCFESNLH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCHHHHCCCC
GSNLIQTHRAVLDTASGPVKVMLVGQQSSPTSNFEQLQQLMRKNGTAEQWNQGMPTPASY
CCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCHHH
ERALKAIKLAEKEARLIITMIDTPGADPTEEAESGGIAWKIGHCMQALAEASVPTISVIM
HHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHCCCCEEEHHHHHHHHHHCCCCEEEHHH
NRGCSGGAIALTGCDIVLAMEYSTYLVISPEACSSILFRTRDKANLAAEISQITSKEALH
HCCCCCCEEEEECCEEEEEEECCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
HKIIDAIIAEPDGPAHRFPQSAIASLRASLCNHIEQLSAIPQEEVFDARVQRWKQIGRWD
HHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
RITEEEIASFEQHRSRRIARPEGNMFVQRHKGCRGSDGKRIYDPVLYSALIDDNYVCKDC
CCCHHHHHHHHHHHHCCCCCCCCCEEHEECCCCCCCCCCCHHHHHHHHHHHCCCCEEHHC
GYRYTRLSAYDYIDIVLDQGSFREHEATRHLVDLDILGFPGYSQKILEERKKTGIASALL
CCCEEEECCCCEEEEEECCCCCCHHHHHHHEEEEEEECCCCCHHHHHHHHHHCCHHHEEE
TGDGTVGGKPVVICVTDFGFLGGSFCMSTGEKIWQASQIALDRKCPIIIQAAGGGARMHE
ECCCCCCCCEEEEEEECCCHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH
GCSSMVSIPKIHVALSRVEKAGIPVLTIITDPTLGGVAIGFGSRGIQLFEHKAGNIGFSG
HHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCHHHHCCCCCCCCCH
KRVIEQYTGKKTSHDFQTTTWLQEKGYANHIVNPMSMHMDIEAIINDFYRN
HHHHHHHCCCCCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA