Click here to switch to the map view.

The map label for this gene is 193213205

Identifier: 193213205

GI number: 193213205

Start: 1707443

End: 1708378

Strand: Direct

Name: 193213205

Synonym: Cpar_1560

Alternate gene names: NA

Gene position: 1707443-1708378 (Clockwise)

Preceding gene: 193213204

Following gene: 193213210

Centisome position: 74.59

GC content: 56.09

Gene sequence:

>936_bases
ATGAAAAAAACCATCCTTTCCGCCACGCTGGCGATCATGGTCCTGCTCTGGCACTCGCTGAGCTTCGCCGCTATCAACCA
GTTTACCGGCCACTGGAAAAACACCGACTCGAACACCCGGGGCATCACCACTCTGGACATCACCGGTAACGCCAATGCCC
TGAAGATGCACGCCTGGGGCAAGTGCCATCCGAACGATTGCGACTGGGGCGAAGTCAAGGCCTATGCTTACGCTCCAAGC
GTTTCCTCGCCAATGGAGCAGAATGCACGAGCCGTCTCCGCCGTCTACAACACAGGTTTCAGCCAGACGCTCGTCATCGT
CAAAGCGTTGGGAAACAACAAGATCCGCGCCGAAGTGTTCACCCGCTTCACCGACAACAGCAACCGCAGCAACTACACCG
CGATCTACACCTTTAAACGTCAGCTTCAGGTCGCCCCGATCAAGCCGATGCCAATTCCGATGAAACCGATGATGCCGGTT
GTCAAAGAAGACTGCATCTCGTTCAACCCGGCCACCACGACCCTCAGAAACATCGACGGGCGCTGGACGATTGTTGACGG
CAACCACCTGATGTTCAACTTCGGCGACAAAAAGGCTGAGGCCATCAAAGCGCTGAGCATCATCAAGCACTACAAAATGA
ACCAGAGCTGCTTCGTTGGTCGCCCCGACCCCAGCTTCAGCTACCTGCTGGTTAACGGCCAGGCGCCTCAGGGCAGCATG
CAGGGCGAAGACTGCGTGAGCTTCAACCCGAACACCATCGAGGTCAAGAAAATCAACGGCCGCTGGAAGATCGTTGACGG
CAGCCACTGGGTTTTCGATTTCAACGATAAGGAAGGCGAAGCCAGAACCGCGTTTGCGATCATCAAAAAGTACGGCTTCA
ACCGCTCCTGCTACGTCGGCCGCCCCGACCCCAGCTTCATTTACCTGAGGAAGTAA

Upstream 100 bases:

>100_bases
CGAAATCATGCCGGCTACCGTTTGTTCTGCGCCAATGATTCTCTAACTTTTCAATGTTGATTCAAACCTCACCCCTAACC
ACCGATTAACAGGAACCATC

Downstream 100 bases:

>100_bases
GCACGACTTTTTCGTAAATGCACAAAACCCCCGGTTTCAGCTCATGGAACCGGGGGTTTTTCAGTTTTGTGGGGATTAAT
TGGGACAAGCTTGCTAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MKKTILSATLAIMVLLWHSLSFAAINQFTGHWKNTDSNTRGITTLDITGNANALKMHAWGKCHPNDCDWGEVKAYAYAPS
VSSPMEQNARAVSAVYNTGFSQTLVIVKALGNNKIRAEVFTRFTDNSNRSNYTAIYTFKRQLQVAPIKPMPIPMKPMMPV
VKEDCISFNPATTTLRNIDGRWTIVDGNHLMFNFGDKKAEAIKALSIIKHYKMNQSCFVGRPDPSFSYLLVNGQAPQGSM
QGEDCVSFNPNTIEVKKINGRWKIVDGSHWVFDFNDKEGEARTAFAIIKKYGFNRSCYVGRPDPSFIYLRK

Sequences:

>Translated_311_residues
MKKTILSATLAIMVLLWHSLSFAAINQFTGHWKNTDSNTRGITTLDITGNANALKMHAWGKCHPNDCDWGEVKAYAYAPS
VSSPMEQNARAVSAVYNTGFSQTLVIVKALGNNKIRAEVFTRFTDNSNRSNYTAIYTFKRQLQVAPIKPMPIPMKPMMPV
VKEDCISFNPATTTLRNIDGRWTIVDGNHLMFNFGDKKAEAIKALSIIKHYKMNQSCFVGRPDPSFSYLLVNGQAPQGSM
QGEDCVSFNPNTIEVKKINGRWKIVDGSHWVFDFNDKEGEARTAFAIIKKYGFNRSCYVGRPDPSFIYLRK
>Mature_311_residues
MKKTILSATLAIMVLLWHSLSFAAINQFTGHWKNTDSNTRGITTLDITGNANALKMHAWGKCHPNDCDWGEVKAYAYAPS
VSSPMEQNARAVSAVYNTGFSQTLVIVKALGNNKIRAEVFTRFTDNSNRSNYTAIYTFKRQLQVAPIKPMPIPMKPMMPV
VKEDCISFNPATTTLRNIDGRWTIVDGNHLMFNFGDKKAEAIKALSIIKHYKMNQSCFVGRPDPSFSYLLVNGQAPQGSM
QGEDCVSFNPNTIEVKKINGRWKIVDGSHWVFDFNDKEGEARTAFAIIKKYGFNRSCYVGRPDPSFIYLRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34970; Mature: 34970

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTILSATLAIMVLLWHSLSFAAINQFTGHWKNTDSNTRGITTLDITGNANALKMHAWG
CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEECC
KCHPNDCDWGEVKAYAYAPSVSSPMEQNARAVSAVYNTGFSQTLVIVKALGNNKIRAEVF
CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEE
TRFTDNSNRSNYTAIYTFKRQLQVAPIKPMPIPMKPMMPVVKEDCISFNPATTTLRNIDG
EEECCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHEECCCC
RWTIVDGNHLMFNFGDKKAEAIKALSIIKHYKMNQSCFVGRPDPSFSYLLVNGQAPQGSM
EEEEEECCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCCC
QGEDCVSFNPNTIEVKKINGRWKIVDGSHWVFDFNDKEGEARTAFAIIKKYGFNRSCYVG
CCCCCEECCCCEEEEEEECCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEC
RPDPSFIYLRK
CCCCCEEEEEC
>Mature Secondary Structure
MKKTILSATLAIMVLLWHSLSFAAINQFTGHWKNTDSNTRGITTLDITGNANALKMHAWG
CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEECC
KCHPNDCDWGEVKAYAYAPSVSSPMEQNARAVSAVYNTGFSQTLVIVKALGNNKIRAEVF
CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEE
TRFTDNSNRSNYTAIYTFKRQLQVAPIKPMPIPMKPMMPVVKEDCISFNPATTTLRNIDG
EEECCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHEECCCC
RWTIVDGNHLMFNFGDKKAEAIKALSIIKHYKMNQSCFVGRPDPSFSYLLVNGQAPQGSM
EEEEEECCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCCC
QGEDCVSFNPNTIEVKKINGRWKIVDGSHWVFDFNDKEGEARTAFAIIKKYGFNRSCYVG
CCCCCEECCCCEEEEEEECCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEC
RPDPSFIYLRK
CCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA