| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212707
Identifier: 193212707
GI number: 193212707
Start: 1160277
End: 1162580
Strand: Direct
Name: 193212707
Synonym: Cpar_1052
Alternate gene names: NA
Gene position: 1160277-1162580 (Clockwise)
Preceding gene: 193212706
Following gene: 193212708
Centisome position: 50.68
GC content: 43.06
Gene sequence:
>2304_bases ATGTACGATTTCAAGACATTGTCTGCCTACGACTTTGAGTTGCTTGTTCGTGATCTTTTGCAAAAGAAACTTGGTATAGT ACTCGAAAGCTTTAAGTCTGGGAGAGACGGTGGCGTTGATTTGCGCTATGCGCCCTCAGCTGATGATTCACTTGTAGTGC AATGCAAGCACTATGCAGAAACGGGATACTCCGGACTACTATTTGCCCTAAAAAAAGAGAATTCAAAGGTTAACCGACTT GCCCCCAATCGGTACTGTATTGCAACATCAGTTCCGCTCTCACCTGCTAACAAGCAAGAAATTCGCGCAATATTCGAACC ACACTGCAAAATCGACGAAGACATCTTGGGGCTTGAGGATCTTAACAACTTGCTCACTCTTTACCCGGACATTGAGCGAA ACCATTACAAGCTGTGGCTGACCAGCACGACAGTTTTAGAGCGGATCGTTCACAGTGATGTATATAATCAAACAGTGTTA CTCGTTGAGTCAATACAGCGAAAAGCTCGGCTCTATGTTCAAAACAGTAGCTTTTTTGATGCCCTTAAACTGCTAAGAAG CTACAAGTATTGCATAATCTCAGGAAATCCCGGCATAGGAAAGACATTTTTAGCTGAAATGTTACTCCTTGAACATATTT GCCAAGGTTTTGAGCCGGTTGTTGTAAGAAGCCATATTTCTGAGGCCTTTAAATTACTCAAGGCCAACACGAAACAGGTC TTCTATTATGATGATTTCCTTGGTCAGACGGGATGGGAGGATAAGCTTGAGAAGAATGAAGAGCAGAGCATTTTAGATTT CGTTGCCTACGTTAGAAATCATGAGCACGCGGTTTTTATTTTAACGACTCGGGAGTATATTTTACAGCAGGCTCGAACTG TATACGAGAAACTTCATGCTGCGGATTTTGATCATGCTAAGTGCATCATTGAACTTGGATCCTACACTCGCCGAAACAAG GCTCATATCCTCTTGAATCATGTGTTCTTTTCGGACTTGACGCCAGAGCATAAAAATGCGTTAGTACGAAAGAAGAGTCT ATTGGCCATTGTTGATCACAGAAATTACTCGCCTCGAATAGTGGAATGGATGTCTGGAGTCCAGAACATCCGAGACTGCA CTCCGGCTGAATATCCAAATGTCTTCATAAGCACACTAAATGACCCAGAGAATCTCTGGCGGCATGCCTACCGAAACCAC CTTTCTCCAGCTGCACGCAGCATGCTACTTGTACTATACTCCTTCCAAGGGTCAGTTGACTTGGAGGATTTACGGGAAGC ATTTGAAGCATTCAGGCGACTGGAAGCTCAGCAACTTAGCGCGATGCGTGCTGCTAACGAGTTCACTACTGTACTTGATG AGCTAGAAGGATCATTAATTCGATGTGAACGTAATGCCTATAGTGTTGCTGTAGCTTTTCATGATCCATCAGTGCGTGAC TTTCTTGAGAAGCATATGTCGATTAACTCTGATCAAGCTCTGATACTATGTGATAGTCTTGTTTTCTATGATCAATTCCG GGGAGTATTCACCCCACATGCGACACTATATCAACGAAATCCTACGCGAATTGGTGAAGGATTAGAACAGAGCGCAATTT TATCGGCAGCGCTTCGTACAGTAACGCGTGCGGCTAAAAAACCTATTTTACGCATCAATTGGGATGGAGCTGCAAGAGTC TCTAATTTAATCTGTACAAGCTTAGAGCAAAATATCGTTCATGCGATACGCATGTCAAATGATCTACCAAGCTTAGAGCG CGCTTCTTTCATAGTTCAAGTGCTGATGCACGAAGAAAAGAGAATAATAACGGGAAATGTTAATCTTTCTGATTTACCTC AAGTTATTTCAGCTGCTAAGTCAGTCCCTGAAATTTCTGATGCTTGTGAGCGATTGATTGAGTTGGCCACTCGACTCTAT GAAAATACCGATGACTACGAGGAGCTTAAACAATATATAGCTCTTAAGGACTTCGTTGAGGCGGCGCCTAATGCAATTGA AGACGACAAAATTCAGGTGGTTAGAACACGTCTTATAGAGGAAGGATACGACATCTTTTATTTTGATATTAGCCGAGCTG ATGACGAAAATGAACTGGATGAACTTGACAATACAGCAGCTGCTTTTGAACTGACTTTTGATGTGTCTTTGGACAGCATT CATGAGCGAATTGAAGAGGCCAAAGAGGAATTACTAACACGCATTGAGGAACCTCCTAACGACTGGCTTGACGATGAACC AAGGCAAACGCGAGACGCTGATGACACCGAAATAGTAGAGATGTTCGGATGCTTGTCGGAATGA
Upstream 100 bases:
>100_bases TGGCGGTGAACCGGTATCGGAAGACTTCGGAGTGAGAGGGGGGGGGCTCCTGTGTGTTTTGAAGAATTAATAGATAATGT TCGAGGTAGGAGAAAAAAAG
Downstream 100 bases:
>100_bases GATACTGTTGAATAAAATTTTCCTCGCCTCATCATCCGAAATGCGCGAAGATCGCGACGCCTTCGACCTTTATTTCCGGC AACAAAACGACCGGTTGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 767; Mature: 767
Protein sequence:
>767_residues MYDFKTLSAYDFELLVRDLLQKKLGIVLESFKSGRDGGVDLRYAPSADDSLVVQCKHYAETGYSGLLFALKKENSKVNRL APNRYCIATSVPLSPANKQEIRAIFEPHCKIDEDILGLEDLNNLLTLYPDIERNHYKLWLTSTTVLERIVHSDVYNQTVL LVESIQRKARLYVQNSSFFDALKLLRSYKYCIISGNPGIGKTFLAEMLLLEHICQGFEPVVVRSHISEAFKLLKANTKQV FYYDDFLGQTGWEDKLEKNEEQSILDFVAYVRNHEHAVFILTTREYILQQARTVYEKLHAADFDHAKCIIELGSYTRRNK AHILLNHVFFSDLTPEHKNALVRKKSLLAIVDHRNYSPRIVEWMSGVQNIRDCTPAEYPNVFISTLNDPENLWRHAYRNH LSPAARSMLLVLYSFQGSVDLEDLREAFEAFRRLEAQQLSAMRAANEFTTVLDELEGSLIRCERNAYSVAVAFHDPSVRD FLEKHMSINSDQALILCDSLVFYDQFRGVFTPHATLYQRNPTRIGEGLEQSAILSAALRTVTRAAKKPILRINWDGAARV SNLICTSLEQNIVHAIRMSNDLPSLERASFIVQVLMHEEKRIITGNVNLSDLPQVISAAKSVPEISDACERLIELATRLY ENTDDYEELKQYIALKDFVEAAPNAIEDDKIQVVRTRLIEEGYDIFYFDISRADDENELDELDNTAAAFELTFDVSLDSI HERIEEAKEELLTRIEEPPNDWLDDEPRQTRDADDTEIVEMFGCLSE
Sequences:
>Translated_767_residues MYDFKTLSAYDFELLVRDLLQKKLGIVLESFKSGRDGGVDLRYAPSADDSLVVQCKHYAETGYSGLLFALKKENSKVNRL APNRYCIATSVPLSPANKQEIRAIFEPHCKIDEDILGLEDLNNLLTLYPDIERNHYKLWLTSTTVLERIVHSDVYNQTVL LVESIQRKARLYVQNSSFFDALKLLRSYKYCIISGNPGIGKTFLAEMLLLEHICQGFEPVVVRSHISEAFKLLKANTKQV FYYDDFLGQTGWEDKLEKNEEQSILDFVAYVRNHEHAVFILTTREYILQQARTVYEKLHAADFDHAKCIIELGSYTRRNK AHILLNHVFFSDLTPEHKNALVRKKSLLAIVDHRNYSPRIVEWMSGVQNIRDCTPAEYPNVFISTLNDPENLWRHAYRNH LSPAARSMLLVLYSFQGSVDLEDLREAFEAFRRLEAQQLSAMRAANEFTTVLDELEGSLIRCERNAYSVAVAFHDPSVRD FLEKHMSINSDQALILCDSLVFYDQFRGVFTPHATLYQRNPTRIGEGLEQSAILSAALRTVTRAAKKPILRINWDGAARV SNLICTSLEQNIVHAIRMSNDLPSLERASFIVQVLMHEEKRIITGNVNLSDLPQVISAAKSVPEISDACERLIELATRLY ENTDDYEELKQYIALKDFVEAAPNAIEDDKIQVVRTRLIEEGYDIFYFDISRADDENELDELDNTAAAFELTFDVSLDSI HERIEEAKEELLTRIEEPPNDWLDDEPRQTRDADDTEIVEMFGCLSE >Mature_767_residues MYDFKTLSAYDFELLVRDLLQKKLGIVLESFKSGRDGGVDLRYAPSADDSLVVQCKHYAETGYSGLLFALKKENSKVNRL APNRYCIATSVPLSPANKQEIRAIFEPHCKIDEDILGLEDLNNLLTLYPDIERNHYKLWLTSTTVLERIVHSDVYNQTVL LVESIQRKARLYVQNSSFFDALKLLRSYKYCIISGNPGIGKTFLAEMLLLEHICQGFEPVVVRSHISEAFKLLKANTKQV FYYDDFLGQTGWEDKLEKNEEQSILDFVAYVRNHEHAVFILTTREYILQQARTVYEKLHAADFDHAKCIIELGSYTRRNK AHILLNHVFFSDLTPEHKNALVRKKSLLAIVDHRNYSPRIVEWMSGVQNIRDCTPAEYPNVFISTLNDPENLWRHAYRNH LSPAARSMLLVLYSFQGSVDLEDLREAFEAFRRLEAQQLSAMRAANEFTTVLDELEGSLIRCERNAYSVAVAFHDPSVRD FLEKHMSINSDQALILCDSLVFYDQFRGVFTPHATLYQRNPTRIGEGLEQSAILSAALRTVTRAAKKPILRINWDGAARV SNLICTSLEQNIVHAIRMSNDLPSLERASFIVQVLMHEEKRIITGNVNLSDLPQVISAAKSVPEISDACERLIELATRLY ENTDDYEELKQYIALKDFVEAAPNAIEDDKIQVVRTRLIEEGYDIFYFDISRADDENELDELDNTAAAFELTFDVSLDSI HERIEEAKEELLTRIEEPPNDWLDDEPRQTRDADDTEIVEMFGCLSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88012; Mature: 88012
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDFKTLSAYDFELLVRDLLQKKLGIVLESFKSGRDGGVDLRYAPSADDSLVVQCKHYAE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEHHHHH TGYSGLLFALKKENSKVNRLAPNRYCIATSVPLSPANKQEIRAIFEPHCKIDEDILGLED CCCCCEEEEEECCCCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCHHCCHHH LNNLLTLYPDIERNHYKLWLTSTTVLERIVHSDVYNQTVLLVESIQRKARLYVQNSSFFD HHHHEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHH ALKLLRSYKYCIISGNPGIGKTFLAEMLLLEHICQGFEPVVVRSHISEAFKLLKANTKQV HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEE FYYDDFLGQTGWEDKLEKNEEQSILDFVAYVRNHEHAVFILTTREYILQQARTVYEKLHA EEEHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHH ADFDHAKCIIELGSYTRRNKAHILLNHVFFSDLTPEHKNALVRKKSLLAIVDHRNYSPRI CCCCHHHHHHHHHCCCCCCCHHEEEHHHHHHCCCCHHHHHHHHHHHHEEEEECCCCCHHH VEWMSGVQNIRDCTPAEYPNVFISTLNDPENLWRHAYRNHLSPAARSMLLVLYSFQGSVD HHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC LEDLREAFEAFRRLEAQQLSAMRAANEFTTVLDELEGSLIRCERNAYSVAVAFHDPSVRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCHHHH FLEKHMSINSDQALILCDSLVFYDQFRGVFTPHATLYQRNPTRIGEGLEQSAILSAALRT HHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHH VTRAAKKPILRINWDGAARVSNLICTSLEQNIVHAIRMSNDLPSLERASFIVQVLMHEEK HHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC RIITGNVNLSDLPQVISAAKSVPEISDACERLIELATRLYENTDDYEELKQYIALKDFVE EEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AAPNAIEDDKIQVVRTRLIEEGYDIFYFDISRADDENELDELDNTAAAFELTFDVSLDSI HCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHCCCCEEEEEEEECCHHHH HERIEEAKEELLTRIEEPPNDWLDDEPRQTRDADDTEIVEMFGCLSE HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MYDFKTLSAYDFELLVRDLLQKKLGIVLESFKSGRDGGVDLRYAPSADDSLVVQCKHYAE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEHHHHH TGYSGLLFALKKENSKVNRLAPNRYCIATSVPLSPANKQEIRAIFEPHCKIDEDILGLED CCCCCEEEEEECCCCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCHHCCHHH LNNLLTLYPDIERNHYKLWLTSTTVLERIVHSDVYNQTVLLVESIQRKARLYVQNSSFFD HHHHEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHH ALKLLRSYKYCIISGNPGIGKTFLAEMLLLEHICQGFEPVVVRSHISEAFKLLKANTKQV HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEE FYYDDFLGQTGWEDKLEKNEEQSILDFVAYVRNHEHAVFILTTREYILQQARTVYEKLHA EEEHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHH ADFDHAKCIIELGSYTRRNKAHILLNHVFFSDLTPEHKNALVRKKSLLAIVDHRNYSPRI CCCCHHHHHHHHHCCCCCCCHHEEEHHHHHHCCCCHHHHHHHHHHHHEEEEECCCCCHHH VEWMSGVQNIRDCTPAEYPNVFISTLNDPENLWRHAYRNHLSPAARSMLLVLYSFQGSVD HHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC LEDLREAFEAFRRLEAQQLSAMRAANEFTTVLDELEGSLIRCERNAYSVAVAFHDPSVRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCHHHH FLEKHMSINSDQALILCDSLVFYDQFRGVFTPHATLYQRNPTRIGEGLEQSAILSAALRT HHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHH VTRAAKKPILRINWDGAARVSNLICTSLEQNIVHAIRMSNDLPSLERASFIVQVLMHEEK HHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC RIITGNVNLSDLPQVISAAKSVPEISDACERLIELATRLYENTDDYEELKQYIALKDFVE EEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AAPNAIEDDKIQVVRTRLIEEGYDIFYFDISRADDENELDELDNTAAAFELTFDVSLDSI HCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHCCCCEEEEEEEECCHHHH HERIEEAKEELLTRIEEPPNDWLDDEPRQTRDADDTEIVEMFGCLSE HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]