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The map label for this gene is fnr [C]

Identifier: 193212626

GI number: 193212626

Start: 1073523

End: 1075490

Strand: Direct

Name: fnr [C]

Synonym: Cpar_0971

Alternate gene names: 193212626

Gene position: 1073523-1075490 (Clockwise)

Preceding gene: 193212625

Following gene: 193212627

Centisome position: 46.89

GC content: 55.79

Gene sequence:

>1968_bases
ATGAACAACGCTACTCCGTCCAACACCATTGTCGAGAGGGTCGCTGCCGATCTCGGCAAATATCCACCTTTTGACCATCT
TTCCGAAGAACGGATTCGCAAAATAGCTGAATCGTTGTTTGTCGAGTACCATGAGGAGGGCGAAATGCTTTTCCGGAAAG
GTGATGAGCTCGGTAAGGTTTCCTACATGGTGATGAAGGGGGCTGTCCGCCTGTACGATACCATCGACGGCGAGGAGGTG
CTTGTCGATCTGTGTGACGAGGGCGATCTGTTCGGCGTGCGGGCCATTTTCGGTACCAGTGACTACCTGCTTTCGGCGCA
GGTCGTTGAAGAGAGTCTGCTGTTTGCCATTCCGGTTGAGACGATTCGCGAGCTGTCCCAGTCCGAACCTTCGGTTGCGG
CATTCTTTACCGGCGCGATCGCAAAAAGCGTGCAGAATATCGAGCACTCGCTCTCCGAAGCGTTCGACTTGCGCCGGGGT
TCTATGGAACCCTCCGAGCTTACCCTCAGATGCCTGCTCGATAACGAGCCTCTCGTGGTCGATCAGGTGCGTGACGTGAT
CACCTGTTCGCCAGATATTTCTATCCGGGAGGCGGCCAAAATCATGTCCGACAACAACATCGGCTCGATTATCGTCGTCT
CCGAAGAGCGCCATCCACTTGGCATCATCACCGATACCGACCTGCGCAAAAAGGTTGTGGCCGTGCCAGGCCAGGTCAGC
GATCGCCCGGTGAGCGAGATCATGAGCAGTCCGGTCTATACGATCACCGCTGGCAAGACCGTGGCCGACATGACGATGCT
CATGGTCAGAACCAAGCTTCGACACTTTTGCATCACCGAGGACGGCACTCTGAACAGTCCGATTACGGGCATCATTTCGG
AGCACGACATCGTGACCTCCGAAGGGGTTAATCCCGCGGTGCTCATGAAGTCGATCATGCAGTCGGAGAGCGTAGAGCAG
CTGAGCGCCGAGCGCGACAAGGCCGAAAAGCTTCTGCAGATGTACATCGCTCAGGAGGTTTCAATCCACTTCGTGCTGAA
TATTTTCGCCGAGCTGAACGACGCGGTGATCGTCAAGGCGATTGACTTCGCCATTGCTGAAATGAACGCAGAGGGCTTGG
CGATGCCCGATGTGGAGTTCTGCTGGCTGTCGCTGGGCAGCGAGGGACGCAAGGAGCAGTTGCTCCGCACCGATCAGGAC
AACGCGATTCTCTACGCCGATCCGCCTCCGGAAGGCAGGGAAGCGGCGGAGCGCTACTTCCTCGAACTTGGCAAGCGGGT
GTGCGCCACGCTGGTGGCTTGCGGTTTTACGAAGTGCCCGGCGGATATCATGGCCAGCAATCCGCAATGGTGCCAGCCGC
TCGGCGGGTGGATGAACTATTTCCGCAAGTGGATCCAGACGCCTGAGCCGAAAGCGTTGATGCACTCGACGATCTTTTTC
GATTTCCGTCCGGTCTATGGCAGCACTTCGCTGGCTGTCGAGATGAAACGGCAGATTCTGAAGGAGGTCGAACAGGGCCG
TGGCTTCCTGCAGTTTTTTGCCAAGAACGCCTTGCAGAATCCGCCACCGCTCGGATTTTTCAGGAACTTCCTTGTGGAGA
AAAGCCGCGAACACGCTCACGAGTTCGACATCAAGGCTCGGGCCATGATGCCGCTTTCCGATGCGGCTCGAGTGCTGGTG
TACGAGCAGAAGATCGGAGAATTTCTGAGTACAACCGAACGGTTCAGGCGGCTCGGTCAGGTGATTTCAGGTTTCGAAGA
GCTGGCTTCGGAAGCAATTGAGGCCTATGAGTTTCTGATTCTTCTGAAAACAAAGCATGGCCTGGCCAACGACTCTTCAG
GTCGTTATATCGATCCGGAAGGGCTTAACAAGATCGAACGCCAGATGCTCAGAAACGTCTTTTCAACCATCGGCAAGGTG
CAGAGCATGCTCAACCTCCGGTTCCAGCTCGACTACATCCGTGATTGA

Upstream 100 bases:

>100_bases
CACCGCATGCTGGTCTGACTTTCTGTCCCATTCCTGTCACATCGTTCCGGTGCGGCCATAGATAAGAGGATGAACCCGCC
AATCTTCGGGAGTCTCAGGC

Downstream 100 bases:

>100_bases
GCTGATCCAGAAAAAGCTGCTCTTGCGGAAGTGCCGGAACGGAGAGCTGCCGGAGAGCGTCTGCCGCTACCTGCACCGGT
TCGACGAAGGCTTTCGCGCA

Product: putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase

Products: NA

Alternate protein names: OrfX [H]

Number of amino acids: Translated: 655; Mature: 655

Protein sequence:

>655_residues
MNNATPSNTIVERVAADLGKYPPFDHLSEERIRKIAESLFVEYHEEGEMLFRKGDELGKVSYMVMKGAVRLYDTIDGEEV
LVDLCDEGDLFGVRAIFGTSDYLLSAQVVEESLLFAIPVETIRELSQSEPSVAAFFTGAIAKSVQNIEHSLSEAFDLRRG
SMEPSELTLRCLLDNEPLVVDQVRDVITCSPDISIREAAKIMSDNNIGSIIVVSEERHPLGIITDTDLRKKVVAVPGQVS
DRPVSEIMSSPVYTITAGKTVADMTMLMVRTKLRHFCITEDGTLNSPITGIISEHDIVTSEGVNPAVLMKSIMQSESVEQ
LSAERDKAEKLLQMYIAQEVSIHFVLNIFAELNDAVIVKAIDFAIAEMNAEGLAMPDVEFCWLSLGSEGRKEQLLRTDQD
NAILYADPPPEGREAAERYFLELGKRVCATLVACGFTKCPADIMASNPQWCQPLGGWMNYFRKWIQTPEPKALMHSTIFF
DFRPVYGSTSLAVEMKRQILKEVEQGRGFLQFFAKNALQNPPPLGFFRNFLVEKSREHAHEFDIKARAMMPLSDAARVLV
YEQKIGEFLSTTERFRRLGQVISGFEELASEAIEAYEFLILLKTKHGLANDSSGRYIDPEGLNKIERQMLRNVFSTIGKV
QSMLNLRFQLDYIRD

Sequences:

>Translated_655_residues
MNNATPSNTIVERVAADLGKYPPFDHLSEERIRKIAESLFVEYHEEGEMLFRKGDELGKVSYMVMKGAVRLYDTIDGEEV
LVDLCDEGDLFGVRAIFGTSDYLLSAQVVEESLLFAIPVETIRELSQSEPSVAAFFTGAIAKSVQNIEHSLSEAFDLRRG
SMEPSELTLRCLLDNEPLVVDQVRDVITCSPDISIREAAKIMSDNNIGSIIVVSEERHPLGIITDTDLRKKVVAVPGQVS
DRPVSEIMSSPVYTITAGKTVADMTMLMVRTKLRHFCITEDGTLNSPITGIISEHDIVTSEGVNPAVLMKSIMQSESVEQ
LSAERDKAEKLLQMYIAQEVSIHFVLNIFAELNDAVIVKAIDFAIAEMNAEGLAMPDVEFCWLSLGSEGRKEQLLRTDQD
NAILYADPPPEGREAAERYFLELGKRVCATLVACGFTKCPADIMASNPQWCQPLGGWMNYFRKWIQTPEPKALMHSTIFF
DFRPVYGSTSLAVEMKRQILKEVEQGRGFLQFFAKNALQNPPPLGFFRNFLVEKSREHAHEFDIKARAMMPLSDAARVLV
YEQKIGEFLSTTERFRRLGQVISGFEELASEAIEAYEFLILLKTKHGLANDSSGRYIDPEGLNKIERQMLRNVFSTIGKV
QSMLNLRFQLDYIRD
>Mature_655_residues
MNNATPSNTIVERVAADLGKYPPFDHLSEERIRKIAESLFVEYHEEGEMLFRKGDELGKVSYMVMKGAVRLYDTIDGEEV
LVDLCDEGDLFGVRAIFGTSDYLLSAQVVEESLLFAIPVETIRELSQSEPSVAAFFTGAIAKSVQNIEHSLSEAFDLRRG
SMEPSELTLRCLLDNEPLVVDQVRDVITCSPDISIREAAKIMSDNNIGSIIVVSEERHPLGIITDTDLRKKVVAVPGQVS
DRPVSEIMSSPVYTITAGKTVADMTMLMVRTKLRHFCITEDGTLNSPITGIISEHDIVTSEGVNPAVLMKSIMQSESVEQ
LSAERDKAEKLLQMYIAQEVSIHFVLNIFAELNDAVIVKAIDFAIAEMNAEGLAMPDVEFCWLSLGSEGRKEQLLRTDQD
NAILYADPPPEGREAAERYFLELGKRVCATLVACGFTKCPADIMASNPQWCQPLGGWMNYFRKWIQTPEPKALMHSTIFF
DFRPVYGSTSLAVEMKRQILKEVEQGRGFLQFFAKNALQNPPPLGFFRNFLVEKSREHAHEFDIKARAMMPLSDAARVLV
YEQKIGEFLSTTERFRRLGQVISGFEELASEAIEAYEFLILLKTKHGLANDSSGRYIDPEGLNKIERQMLRNVFSTIGKV
QSMLNLRFQLDYIRD

Specific function: Global Transcription Factor That Controls The Expression Of Over 100 Target Genes In Response To Anoxia. It Facilitates The Adaptation To Anaerobic Growth Conditions By Regulating The Expression Of Gene Products That Are Involved In Anaerobic Energy Metab

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 73534; Mature: 73534

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNATPSNTIVERVAADLGKYPPFDHLSEERIRKIAESLFVEYHEEGEMLFRKGDELGKV
CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHH
SYMVMKGAVRLYDTIDGEEVLVDLCDEGDLFGVRAIFGTSDYLLSAQVVEESLLFAIPVE
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHEECHH
TIRELSQSEPSVAAFFTGAIAKSVQNIEHSLSEAFDLRRGSMEPSELTLRCLLDNEPLVV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCEEH
DQVRDVITCSPDISIREAAKIMSDNNIGSIIVVSEERHPLGIITDTDLRKKVVAVPGQVS
HHHHHHEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCHHHHHHEECCCCCC
DRPVSEIMSSPVYTITAGKTVADMTMLMVRTKLRHFCITEDGTLNSPITGIISEHDIVTS
CCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHCCCCCEECC
EGVNPAVLMKSIMQSESVEQLSAERDKAEKLLQMYIAQEVSIHFVLNIFAELNDAVIVKA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
IDFAIAEMNAEGLAMPDVEFCWLSLGSEGRKEQLLRTDQDNAILYADPPPEGREAAERYF
HHHHHHHCCCCCCCCCCHHHHHEECCCCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHH
LELGKRVCATLVACGFTKCPADIMASNPQWCQPLGGWMNYFRKWIQTPEPKALMHSTIFF
HHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEE
DFRPVYGSTSLAVEMKRQILKEVEQGRGFLQFFAKNALQNPPPLGFFRNFLVEKSREHAH
EEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
EFDIKARAMMPLSDAARVLVYEQKIGEFLSTTERFRRLGQVISGFEELASEAIEAYEFLI
HCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKTKHGLANDSSGRYIDPEGLNKIERQMLRNVFSTIGKVQSMLNLRFQLDYIRD
EEEECCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
>Mature Secondary Structure
MNNATPSNTIVERVAADLGKYPPFDHLSEERIRKIAESLFVEYHEEGEMLFRKGDELGKV
CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHH
SYMVMKGAVRLYDTIDGEEVLVDLCDEGDLFGVRAIFGTSDYLLSAQVVEESLLFAIPVE
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHEECHH
TIRELSQSEPSVAAFFTGAIAKSVQNIEHSLSEAFDLRRGSMEPSELTLRCLLDNEPLVV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCEEH
DQVRDVITCSPDISIREAAKIMSDNNIGSIIVVSEERHPLGIITDTDLRKKVVAVPGQVS
HHHHHHEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCHHHHHHEECCCCCC
DRPVSEIMSSPVYTITAGKTVADMTMLMVRTKLRHFCITEDGTLNSPITGIISEHDIVTS
CCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHCCCCCEECC
EGVNPAVLMKSIMQSESVEQLSAERDKAEKLLQMYIAQEVSIHFVLNIFAELNDAVIVKA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
IDFAIAEMNAEGLAMPDVEFCWLSLGSEGRKEQLLRTDQDNAILYADPPPEGREAAERYF
HHHHHHHCCCCCCCCCCHHHHHEECCCCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHH
LELGKRVCATLVACGFTKCPADIMASNPQWCQPLGGWMNYFRKWIQTPEPKALMHSTIFF
HHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEE
DFRPVYGSTSLAVEMKRQILKEVEQGRGFLQFFAKNALQNPPPLGFFRNFLVEKSREHAH
EEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
EFDIKARAMMPLSDAARVLVYEQKIGEFLSTTERFRRLGQVISGFEELASEAIEAYEFLI
HCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKTKHGLANDSSGRYIDPEGLNKIERQMLRNVFSTIGKVQSMLNLRFQLDYIRD
EEEECCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11930014; 8522533 [H]