| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is murB [H]
Identifier: 193212594
GI number: 193212594
Start: 1028197
End: 1029786
Strand: Direct
Name: murB [H]
Synonym: Cpar_0937
Alternate gene names: 193212594
Gene position: 1028197-1029786 (Clockwise)
Preceding gene: 193212593
Following gene: 193212607
Centisome position: 44.91
GC content: 60.31
Gene sequence:
>1590_bases ATGAACACCGCTCCATTTGCCTGCCCGTTCCGTGAACATGTTGATCTTTCGACGGTAGGCTACTACGCGATCGGCGGAGA GGCCAGATGGCTGCTTTTGCCTCGAACCGTTGCGGAACTTGCCGCCGCTCTTGCGCAGTGCCGTCAGCATGCGATTCCGG TGATCATTGCAGGAAAGGGCACCAACATGCTTTTTTCGGATGAGCATTTTCCGGGAGCGGTGATTTTGCTTGAATCGATG AAGCGCATCATCCAGCTTTCAGAAAGCCTCTTTTTCTGCGAAGCGGGGGCTGAGAATAGTGATGTCGCCCTGCGGCTCCA GCAGGCGGGGAGAACAGATGGAGAGTGGCTTTACCGGCTTCCAGGCACCATTGGCGCCACGGTGCGCATGAACGGGCGTT GCTACGGTCAAGAAGTTTCTGCTGTAACCCGGAGTGTGGTGACGGTCGGGCTTGACGGTACGGTTTGCTTTCGGGAAGGC TGCGAGGTGTTTCTCGGTTACAAGCACACCAGCCTGATGCAGAGTCCCGAGATCGTCGTCGGAGCGCTGCTCGAATTCGA CAGCGAGGACGATCCAGAGGCGATCGGAAGGCGAATGCAGGAGTATTCGGATGACCGCGAGGCGAAGCACCAGTTTGATT ATCCAAGCTGCGGCTCGACCTTCAAGAACAGCTATGAAGCCGGACAGCCGAGCGGGCAGATTTTCGACGCTCTCGGCTTC AGGCGGCGGCGCGAGGCTGGGGCGCAGGTTAGCGAGCACCACGCCAACTTCATCTTCAACACCGGCGGCGCGAAAGCTGT CGATGTACTTCGCCTTGCCGCAGCCATGCGCACCGCCGCCAGGGAGCAGGTTGGAGCTAATCTCGACCTCGAATTGCACT GCGCCGGCCTTTTCGAGATGGCGTTGCTCGACCAGTGCGGCATCGCCTCGACGCCAGAGCCATCACGCCCCGGTTACGGC TGGACTGGCCTCTTGCGCTTTCCGGATTTCGGGGCGGCGGTGTTCCCCCGAACGCTCCTCCACGGTCCGATGCTCGGTTA CGCTTGTACCGATGCGGAATTTCCGTTCGGCATCACAGTGAGGGTCGAGCAGCTTGCGTCGCTCGAAGAGGCTCGGCGTG CGCCCGAAAAACCCTTTATCCGCTGGACGACTCGCGACGAGAGCGGCACAGCTTTTCCGCTTCGACCCGATGCTCCGGCA GGCGCATTCGTTGATCGCTTGTGGGCATTCAGCGTCTCGGAGCTTTTCATTGGTGGTAGAGATGGGGAAGGCTATCTCGA ATTCGAGTTAACGCCCGAAGGCCACTGGGTAGCGCTTCGTTTCGACGCCCCGCGCCACCGCGCCGCCGGGCACGAAACGC CTTCGGAAGCGCTGTGGCTAGGCAAGGTGCAGCCGTTTGCTGGTGACCAAGGCTTCGGCATGGAGCTCAGTTACGAAATG CTCGAACCCTTTATTCGTGATGGTTCCTTGCACCTGCAATGCGCTGCTAGCCTCGGAGGCGGGCGCTACGGCCTGTTCCC GTGGTGGTGCGACGAAGGCAAGCCCGATTTCCACCAGCCAGGCCGGTTCTGCGAGTTGGCGTTGGCGTGA
Upstream 100 bases:
>100_bases TCCTTCTGTTGGTTCCGGCGTCCTTTTCCTTTTTGTCTGAATCGTTCCTACCTTTGACTTTGTTGTCGATTGCGCCAATC CTCCCAAGTATTCAGGCCTT
Downstream 100 bases:
>100_bases GTTCGTAGGGGCGGGTTTTACACCCGCCCATCAAATACAACAAATTCGCTCATGCGCAGAATATGAAGCGGCTTGTTTGC TTTCAGACCAGCACCATTCC
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase [H]
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MNTAPFACPFREHVDLSTVGYYAIGGEARWLLLPRTVAELAAALAQCRQHAIPVIIAGKGTNMLFSDEHFPGAVILLESM KRIIQLSESLFFCEAGAENSDVALRLQQAGRTDGEWLYRLPGTIGATVRMNGRCYGQEVSAVTRSVVTVGLDGTVCFREG CEVFLGYKHTSLMQSPEIVVGALLEFDSEDDPEAIGRRMQEYSDDREAKHQFDYPSCGSTFKNSYEAGQPSGQIFDALGF RRRREAGAQVSEHHANFIFNTGGAKAVDVLRLAAAMRTAAREQVGANLDLELHCAGLFEMALLDQCGIASTPEPSRPGYG WTGLLRFPDFGAAVFPRTLLHGPMLGYACTDAEFPFGITVRVEQLASLEEARRAPEKPFIRWTTRDESGTAFPLRPDAPA GAFVDRLWAFSVSELFIGGRDGEGYLEFELTPEGHWVALRFDAPRHRAAGHETPSEALWLGKVQPFAGDQGFGMELSYEM LEPFIRDGSLHLQCAASLGGGRYGLFPWWCDEGKPDFHQPGRFCELALA
Sequences:
>Translated_529_residues MNTAPFACPFREHVDLSTVGYYAIGGEARWLLLPRTVAELAAALAQCRQHAIPVIIAGKGTNMLFSDEHFPGAVILLESM KRIIQLSESLFFCEAGAENSDVALRLQQAGRTDGEWLYRLPGTIGATVRMNGRCYGQEVSAVTRSVVTVGLDGTVCFREG CEVFLGYKHTSLMQSPEIVVGALLEFDSEDDPEAIGRRMQEYSDDREAKHQFDYPSCGSTFKNSYEAGQPSGQIFDALGF RRRREAGAQVSEHHANFIFNTGGAKAVDVLRLAAAMRTAAREQVGANLDLELHCAGLFEMALLDQCGIASTPEPSRPGYG WTGLLRFPDFGAAVFPRTLLHGPMLGYACTDAEFPFGITVRVEQLASLEEARRAPEKPFIRWTTRDESGTAFPLRPDAPA GAFVDRLWAFSVSELFIGGRDGEGYLEFELTPEGHWVALRFDAPRHRAAGHETPSEALWLGKVQPFAGDQGFGMELSYEM LEPFIRDGSLHLQCAASLGGGRYGLFPWWCDEGKPDFHQPGRFCELALA >Mature_529_residues MNTAPFACPFREHVDLSTVGYYAIGGEARWLLLPRTVAELAAALAQCRQHAIPVIIAGKGTNMLFSDEHFPGAVILLESM KRIIQLSESLFFCEAGAENSDVALRLQQAGRTDGEWLYRLPGTIGATVRMNGRCYGQEVSAVTRSVVTVGLDGTVCFREG CEVFLGYKHTSLMQSPEIVVGALLEFDSEDDPEAIGRRMQEYSDDREAKHQFDYPSCGSTFKNSYEAGQPSGQIFDALGF RRRREAGAQVSEHHANFIFNTGGAKAVDVLRLAAAMRTAAREQVGANLDLELHCAGLFEMALLDQCGIASTPEPSRPGYG WTGLLRFPDFGAAVFPRTLLHGPMLGYACTDAEFPFGITVRVEQLASLEEARRAPEKPFIRWTTRDESGTAFPLRPDAPA GAFVDRLWAFSVSELFIGGRDGEGYLEFELTPEGHWVALRFDAPRHRAAGHETPSEALWLGKVQPFAGDQGFGMELSYEM LEPFIRDGSLHLQCAASLGGGRYGLFPWWCDEGKPDFHQPGRFCELALA
Specific function: Cell wall formation [H]
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 [H]
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C [H]
EC number: =1.1.1.158 [H]
Molecular weight: Translated: 58167; Mature: 58167
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAPFACPFREHVDLSTVGYYAIGGEARWLLLPRTVAELAAALAQCRQHAIPVIIAGKG CCCCCCCCCHHHCCCEECCEEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCC TNMLFSDEHFPGAVILLESMKRIIQLSESLFFCEAGAENSDVALRLQQAGRTDGEWLYRL CCEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCEEEEEHHCCCCCCCEEEEC PGTIGATVRMNGRCYGQEVSAVTRSVVTVGLDGTVCFREGCEVFLGYKHTSLMQSPEIVV CCCEEEEEEECCEECCHHHHHHHHHHEEECCCCEEEHHCCCEEEECCCHHHHHCCCHHHH GALLEFDSEDDPEAIGRRMQEYSDDREAKHQFDYPSCGSTFKNSYEAGQPSGQIFDALGF HHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHH RRRREAGAQVSEHHANFIFNTGGAKAVDVLRLAAAMRTAAREQVGANLDLELHCAGLFEM HHHHHHCCHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH ALLDQCGIASTPEPSRPGYGWTGLLRFPDFGAAVFPRTLLHGPMLGYACTDAEFPFGITV HHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCCCCEEEE RVEQLASLEEARRAPEKPFIRWTTRDESGTAFPLRPDAPAGAFVDRLWAFSVSELFIGGR EHHHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHEEECC DGEGYLEFELTPEGHWVALRFDAPRHRAAGHETPSEALWLGKVQPFAGDQGFGMELSYEM CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEHHH LEPFIRDGSLHLQCAASLGGGRYGLFPWWCDEGKPDFHQPGRFCELALA HHHHHHCCCEEEEEEEECCCCEECCCEEECCCCCCCCCCCCCCEEEECC >Mature Secondary Structure MNTAPFACPFREHVDLSTVGYYAIGGEARWLLLPRTVAELAAALAQCRQHAIPVIIAGKG CCCCCCCCCHHHCCCEECCEEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCC TNMLFSDEHFPGAVILLESMKRIIQLSESLFFCEAGAENSDVALRLQQAGRTDGEWLYRL CCEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCEEEEEHHCCCCCCCEEEEC PGTIGATVRMNGRCYGQEVSAVTRSVVTVGLDGTVCFREGCEVFLGYKHTSLMQSPEIVV CCCEEEEEEECCEECCHHHHHHHHHHEEECCCCEEEHHCCCEEEECCCHHHHHCCCHHHH GALLEFDSEDDPEAIGRRMQEYSDDREAKHQFDYPSCGSTFKNSYEAGQPSGQIFDALGF HHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHH RRRREAGAQVSEHHANFIFNTGGAKAVDVLRLAAAMRTAAREQVGANLDLELHCAGLFEM HHHHHHCCHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH ALLDQCGIASTPEPSRPGYGWTGLLRFPDFGAAVFPRTLLHGPMLGYACTDAEFPFGITV HHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCCCCEEEE RVEQLASLEEARRAPEKPFIRWTTRDESGTAFPLRPDAPAGAFVDRLWAFSVSELFIGGR EHHHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHEEECC DGEGYLEFELTPEGHWVALRFDAPRHRAAGHETPSEALWLGKVQPFAGDQGFGMELSYEM CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEHHH LEPFIRDGSLHLQCAASLGGGRYGLFPWWCDEGKPDFHQPGRFCELALA HHHHHHCCCEEEEEEEECCCCEECCCEEECCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA