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The map label for this gene is 193212521

Identifier: 193212521

GI number: 193212521

Start: 939706

End: 940710

Strand: Direct

Name: 193212521

Synonym: Cpar_0860

Alternate gene names: NA

Gene position: 939706-940710 (Clockwise)

Preceding gene: 193212520

Following gene: 193212525

Centisome position: 41.05

GC content: 35.92

Gene sequence:

>1005_bases
ATGCACTGGAGATATTTTATTTTTGGCCGCGGACGTGGTTTAGCTAAAATGTTGCCTTTGAATACACCTAATAAAGTCCA
TGTCGATCCGGCAAGTGGGTGCAATTTCAAGTGTTTCTTTTGCCCGCAATCAGACCTTGAATCTCTAAAGTTGGCTGGCT
TTAAGACTGGGGTAATGAAACTAGAGTTATTTAAAAAAATGATTAATGATTTTGTGTGGTTTCCAAATAAAATCGATGAA
TTGGTTCTAGGAAACTATGGAGAACTTTTGTTAAATAAAGATATATCTGAAATGATCGAGTACGCGGTATCTTCGAAATC
TGTAAGGGAGGTTTCTTTGATTACCAATGCTGCTTTACTTGATAAGGAAATAGGTGAAAAAATTGCATTAGCTGGTTTGC
ATAAAATAAGAATATCGATTGAGGGTTTATCTGACGAAGCATACAAAAACACAGTCAACGTTAATGTTTCTTTCGATAAA
ATCGTAAAAAATATTACAGATTTTTATAAATCTGTAAGGCGGTACGGTAACAAAACATTCATTTACGTAAAAATTATTGA
TATTGGATTAACACCAGAAGATAAACGAAAATTTTTTAATGTATTTTCTCCTATTTCTGATTCCGTTGGGATTGAAAACC
TTATGCCTGTAACTGAGAAGGCGGAAAAATTGATCGGAGATAAAAAGAGGGGCATGACAGGTGTAAGTATATCTGAGGGA
AGGTTCGTATGCCCTTCTCCATTCTATTCGCTCTCTGTTCATGTGAATGGAGATGTTGGTGTCTGTTGTTCTGATTGGCA
CCATCAAACCAATATCGGGTCAATAAAGAATTCGACGATGCAAGAAATATGGAGAGGTTCCGAGTTAAATAAATTTCGGT
TAGCACATTTGCAAAATTCATGGAGAAGTGTAGATGCTTGCAGTGGTTGTATTATGGTCGATCATTATCCACCTTACGAA
GATATTGACCATATTCGTGATAACTTGCAAAAGCACTACCAATGA

Upstream 100 bases:

>100_bases
TTTAATTGAAGTAGTTATGACTGCAATCGGGCGGCTATTTGATGTTGCGAAAGATGCAGGATTCTTTCGTGCATTAAAAG
TTATTGTCGGCTTGGTAAGA

Downstream 100 bases:

>100_bases
TTATTACAACCTATACCACCCCGACAAGAAGAAAATCTGTCTACCAACGAAAAAAGGGGAAGAGGCTCCATTCAGGAAAC
TCTTCCCCTTCGTCATTTCA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein; Radical Sam Domain Protein; Fe-S Oxidoreductase Containing Radical SAM Domain; Molybdopterin Cofactor Synthesis Protein A; Molybdenum Cofactor Biosynthesis Protein; Fe-S Oxidoreductases; Fe-S Oxidoreductase-Like Protein; Fe-S Oxidoreductase; Fe-S Oxidoreductase SAM Radical Superfamily; Radical SAM Protein; Radical SAM

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MHWRYFIFGRGRGLAKMLPLNTPNKVHVDPASGCNFKCFFCPQSDLESLKLAGFKTGVMKLELFKKMINDFVWFPNKIDE
LVLGNYGELLLNKDISEMIEYAVSSKSVREVSLITNAALLDKEIGEKIALAGLHKIRISIEGLSDEAYKNTVNVNVSFDK
IVKNITDFYKSVRRYGNKTFIYVKIIDIGLTPEDKRKFFNVFSPISDSVGIENLMPVTEKAEKLIGDKKRGMTGVSISEG
RFVCPSPFYSLSVHVNGDVGVCCSDWHHQTNIGSIKNSTMQEIWRGSELNKFRLAHLQNSWRSVDACSGCIMVDHYPPYE
DIDHIRDNLQKHYQ

Sequences:

>Translated_334_residues
MHWRYFIFGRGRGLAKMLPLNTPNKVHVDPASGCNFKCFFCPQSDLESLKLAGFKTGVMKLELFKKMINDFVWFPNKIDE
LVLGNYGELLLNKDISEMIEYAVSSKSVREVSLITNAALLDKEIGEKIALAGLHKIRISIEGLSDEAYKNTVNVNVSFDK
IVKNITDFYKSVRRYGNKTFIYVKIIDIGLTPEDKRKFFNVFSPISDSVGIENLMPVTEKAEKLIGDKKRGMTGVSISEG
RFVCPSPFYSLSVHVNGDVGVCCSDWHHQTNIGSIKNSTMQEIWRGSELNKFRLAHLQNSWRSVDACSGCIMVDHYPPYE
DIDHIRDNLQKHYQ
>Mature_334_residues
MHWRYFIFGRGRGLAKMLPLNTPNKVHVDPASGCNFKCFFCPQSDLESLKLAGFKTGVMKLELFKKMINDFVWFPNKIDE
LVLGNYGELLLNKDISEMIEYAVSSKSVREVSLITNAALLDKEIGEKIALAGLHKIRISIEGLSDEAYKNTVNVNVSFDK
IVKNITDFYKSVRRYGNKTFIYVKIIDIGLTPEDKRKFFNVFSPISDSVGIENLMPVTEKAEKLIGDKKRGMTGVSISEG
RFVCPSPFYSLSVHVNGDVGVCCSDWHHQTNIGSIKNSTMQEIWRGSELNKFRLAHLQNSWRSVDACSGCIMVDHYPPYE
DIDHIRDNLQKHYQ

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37977; Mature: 37977

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHWRYFIFGRGRGLAKMLPLNTPNKVHVDPASGCNFKCFFCPQSDLESLKLAGFKTGVMK
CCEEEEEEECCCCCEEECCCCCCCEEEECCCCCCCEEEEECCCCCHHHHHHCCHHHHHHH
LELFKKMINDFVWFPNKIDELVLGNYGELLLNKDISEMIEYAVSSKSVREVSLITNAALL
HHHHHHHHHHHCCCCCHHHHHHHCCCHHHEECCCHHHHHHHHHCCCCHHHHHHHHHHHHH
DKEIGEKIALAGLHKIRISIEGLSDEAYKNTVNVNVSFDKIVKNITDFYKSVRRYGNKTF
HHHHHHHHHHCCEEEEEEEEECCCCCHHCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEE
IYVKIIDIGLTPEDKRKFFNVFSPISDSVGIENLMPVTEKAEKLIGDKKRGMTGVSISEG
EEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHCHHHCCCCCEEECCC
RFVCPSPFYSLSVHVNGDVGVCCSDWHHQTNIGSIKNSTMQEIWRGSELNKFRLAHLQNS
CEECCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
WRSVDACSGCIMVDHYPPYEDIDHIRDNLQKHYQ
HCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHWRYFIFGRGRGLAKMLPLNTPNKVHVDPASGCNFKCFFCPQSDLESLKLAGFKTGVMK
CCEEEEEEECCCCCEEECCCCCCCEEEECCCCCCCEEEEECCCCCHHHHHHCCHHHHHHH
LELFKKMINDFVWFPNKIDELVLGNYGELLLNKDISEMIEYAVSSKSVREVSLITNAALL
HHHHHHHHHHHCCCCCHHHHHHHCCCHHHEECCCHHHHHHHHHCCCCHHHHHHHHHHHHH
DKEIGEKIALAGLHKIRISIEGLSDEAYKNTVNVNVSFDKIVKNITDFYKSVRRYGNKTF
HHHHHHHHHHCCEEEEEEEEECCCCCHHCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEE
IYVKIIDIGLTPEDKRKFFNVFSPISDSVGIENLMPVTEKAEKLIGDKKRGMTGVSISEG
EEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHCHHHCCCCCEEECCC
RFVCPSPFYSLSVHVNGDVGVCCSDWHHQTNIGSIKNSTMQEIWRGSELNKFRLAHLQNS
CEECCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
WRSVDACSGCIMVDHYPPYEDIDHIRDNLQKHYQ
HCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA