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The map label for this gene is yaaJ [C]

Identifier: 193212511

GI number: 193212511

Start: 926441

End: 927847

Strand: Direct

Name: yaaJ [C]

Synonym: Cpar_0849

Alternate gene names: 193212511

Gene position: 926441-927847 (Clockwise)

Preceding gene: 193212510

Following gene: 193212512

Centisome position: 40.47

GC content: 62.26

Gene sequence:

>1407_bases
ATGCAATCACTTGAAACCCTTCTCTTGCAAGTCGCCGATGTTGTCTGGGGCATTCCGCTGCTGGTGGCGTTGTTCGGGAC
GCATCTGTTTCTGACGTTCAGGCTCGGCATTATCCAGAAGCATCTGCCGGAGGCGATTCGGATCTCTTTTACCCGGACGA
GCGAAGGGGAGGGGGAGATCAGCCATTTCGGGGCATTGGTGACTTCGCTGGCGGCGACGATTGGCACGGGCAACATCGTC
GGCGTTTCGACCGCCGTGGCGCTTGGCGGGCCGGGGGCGGTGCTGTGGATGTGGCTGACCGGCGTGTTCGGCATCGCGAC
CAAGTATGGCGAGGCGCTACTGTCGGTGAAGTACCGCGTGATCGGCGAGGATGGCTCGGTGGCTGGCGGGCCGATGTATG
TGCTCGAAAAGGGGCTGAATATGAAGTGGCTCGGCGTGCTGTTCGCGGTGTTCACCGTCGTGGCGTCGTTCGGGATCGGC
AACATGGTGCAGTCCAACTCGATTGCGTCGCTGCTTGAGGCGAAGTACCAGGTGTCGCCGTGGCTGACCGGCGTGGTGCT
GACCGTGTTCACCGGTGTGGTGATTATCGGCGGTATCAAGTCCATCGCCCGCGTATGCGAGTACCTCGTGCCGTTTATGG
CCGCGCTCTACCTGCTTGGCTGCATCGTGTTGCTGGTGATGGGCCACCACTCGATTGGCGAGACGCTCGGCGTGATCTTT
AGCTCGGCGTTTTCGGGACAGGCGGCGTTTGGCGGATTCGCGGGCGTCGGCGCGCGCGAGGCGGTGCGGTACGGCATTTC
GCGCGGGTTGTTCTCCAACGAGTCTGGTCTTGGCAGTGCGCCTATCGTAGCGGCGGCGGCGCAGACCACCAATCCTGTTC
GTCAGGCGCTGATCTCCTCGACCGGCACCTTCTGGGATACGGTGGTGGTGTGCGCCGTGACCGGCATCGTCATCGTCAAT
TCGGGAGCGTGGACGACCGGCCTGAAGGGTGCGGAACTGACCAACGCGGCCTTCGCGGACATGGGGGCTGTCGGACCGCT
GGTGCTCTCGTTCGGCCTGCTGACCTTCGTGTTTTCGTACCATCCTCGGCTGGTCGTACTACGGCGAGAAAGCGCTCGAA
TATCTTGCGGGCAAGCGTGCGATCAAGCCCTATCGCTGGGCCTGGGTCGCGGCGGTGATGATCGGCTCGGTTGCTTCGCT
GCAAGCGGTCTGGACCTTCGCCGATATCGCCAATGGCCTCATGGCGGTGCCGAACCTCGTTTCGCTACTGTTGCTGAGCC
CGGTGATCGCCAGCGAAACGAAAGCATACTTCGCGCGGCGGGAGTGAAAGAGGGAGACCCGGAGGCAACGGAACGGCAAG
CGTACAAGTGCATGGCTTTGCGTTCGGACAAAGAGGCAAAGAGGTGA

Upstream 100 bases:

>100_bases
GCACAAACATTTCACCAGGATCGCGATGTCATAGGGCTTCAGTGGGCTGCTTCTGGCATCTATCATCGCCTCTCCCACAC
ATTCATCCTAACCCAAAATC

Downstream 100 bases:

>100_bases
TTCGGGGGAGGGCAGCTGCGAGGGCTGCCCCTACTTTTTTCTGGAAGGTTTGAAAAAAAATTCTATTTTGGCTCACCTTC
CATCAACACCATCAAGATAA

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MQSLETLLLQVADVVWGIPLLVALFGTHLFLTFRLGIIQKHLPEAIRISFTRTSEGEGEISHFGALVTSLAATIGTGNIV
GVSTAVALGGPGAVLWMWLTGVFGIATKYGEALLSVKYRVIGEDGSVAGGPMYVLEKGLNMKWLGVLFAVFTVVASFGIG
NMVQSNSIASLLEAKYQVSPWLTGVVLTVFTGVVIIGGIKSIARVCEYLVPFMAALYLLGCIVLLVMGHHSIGETLGVIF
SSAFSGQAAFGGFAGVGAREAVRYGISRGLFSNESGLGSAPIVAAAAQTTNPVRQALISSTGTFWDTVVVCAVTGIVIVN
SGAWTTGLKGAELTNAAFADMGAVGPLVLSFGLLTFVFSYHPRLVVLRRESARISCGQACDQALSLGLGRGGDDRLGCFA
ASGLDLRRYRQWPHGGAEPRFATVAEPGDRQRNESILRAAGVKEGDPEATERQAYKCMALRSDKEAKR

Sequences:

>Translated_468_residues
MQSLETLLLQVADVVWGIPLLVALFGTHLFLTFRLGIIQKHLPEAIRISFTRTSEGEGEISHFGALVTSLAATIGTGNIV
GVSTAVALGGPGAVLWMWLTGVFGIATKYGEALLSVKYRVIGEDGSVAGGPMYVLEKGLNMKWLGVLFAVFTVVASFGIG
NMVQSNSIASLLEAKYQVSPWLTGVVLTVFTGVVIIGGIKSIARVCEYLVPFMAALYLLGCIVLLVMGHHSIGETLGVIF
SSAFSGQAAFGGFAGVGAREAVRYGISRGLFSNESGLGSAPIVAAAAQTTNPVRQALISSTGTFWDTVVVCAVTGIVIVN
SGAWTTGLKGAELTNAAFADMGAVGPLVLSFGLLTFVFSYHPRLVVLRRESARISCGQACDQALSLGLGRGGDDRLGCFA
ASGLDLRRYRQWPHGGAEPRFATVAEPGDRQRNESILRAAGVKEGDPEATERQAYKCMALRSDKEAKR
>Mature_468_residues
MQSLETLLLQVADVVWGIPLLVALFGTHLFLTFRLGIIQKHLPEAIRISFTRTSEGEGEISHFGALVTSLAATIGTGNIV
GVSTAVALGGPGAVLWMWLTGVFGIATKYGEALLSVKYRVIGEDGSVAGGPMYVLEKGLNMKWLGVLFAVFTVVASFGIG
NMVQSNSIASLLEAKYQVSPWLTGVVLTVFTGVVIIGGIKSIARVCEYLVPFMAALYLLGCIVLLVMGHHSIGETLGVIF
SSAFSGQAAFGGFAGVGAREAVRYGISRGLFSNESGLGSAPIVAAAAQTTNPVRQALISSTGTFWDTVVVCAVTGIVIVN
SGAWTTGLKGAELTNAAFADMGAVGPLVLSFGLLTFVFSYHPRLVVLRRESARISCGQACDQALSLGLGRGGDDRLGCFA
ASGLDLRRYRQWPHGGAEPRFATVAEPGDRQRNESILRAAGVKEGDPEATERQAYKCMALRSDKEAKR

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=417, Percent_Identity=33.5731414868106, Blast_Score=201, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 49299; Mature: 49299

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLETLLLQVADVVWGIPLLVALFGTHLFLTFRLGIIQKHLPEAIRISFTRTSEGEGEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCHH
SHFGALVTSLAATIGTGNIVGVSTAVALGGPGAVLWMWLTGVFGIATKYGEALLSVKYRV
HHHHHHHHHHHHHHCCCCEEEHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
IGEDGSVAGGPMYVLEKGLNMKWLGVLFAVFTVVASFGIGNMVQSNSIASLLEAKYQVSP
ECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCH
WLTGVVLTVFTGVVIIGGIKSIARVCEYLVPFMAALYLLGCIVLLVMGHHSIGETLGVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SSAFSGQAAFGGFAGVGAREAVRYGISRGLFSNESGLGSAPIVAAAAQTTNPVRQALISS
HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHC
TGTFWDTVVVCAVTGIVIVNSGAWTTGLKGAELTNAAFADMGAVGPLVLSFGLLTFVFSY
CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHC
HPRLVVLRRESARISCGQACDQALSLGLGRGGDDRLGCFAASGLDLRRYRQWPHGGAEPR
CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCCCC
FATVAEPGDRQRNESILRAAGVKEGDPEATERQAYKCMALRSDKEAKR
EEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQSLETLLLQVADVVWGIPLLVALFGTHLFLTFRLGIIQKHLPEAIRISFTRTSEGEGEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCHH
SHFGALVTSLAATIGTGNIVGVSTAVALGGPGAVLWMWLTGVFGIATKYGEALLSVKYRV
HHHHHHHHHHHHHHCCCCEEEHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
IGEDGSVAGGPMYVLEKGLNMKWLGVLFAVFTVVASFGIGNMVQSNSIASLLEAKYQVSP
ECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCH
WLTGVVLTVFTGVVIIGGIKSIARVCEYLVPFMAALYLLGCIVLLVMGHHSIGETLGVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SSAFSGQAAFGGFAGVGAREAVRYGISRGLFSNESGLGSAPIVAAAAQTTNPVRQALISS
HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHC
TGTFWDTVVVCAVTGIVIVNSGAWTTGLKGAELTNAAFADMGAVGPLVLSFGLLTFVFSY
CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHC
HPRLVVLRRESARISCGQACDQALSLGLGRGGDDRLGCFAASGLDLRRYRQWPHGGAEPR
CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCCCC
FATVAEPGDRQRNESILRAAGVKEGDPEATERQAYKCMALRSDKEAKR
EEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]