| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212510
Identifier: 193212510
GI number: 193212510
Start: 925181
End: 926125
Strand: Direct
Name: 193212510
Synonym: Cpar_0848
Alternate gene names: NA
Gene position: 925181-926125 (Clockwise)
Preceding gene: 193212509
Following gene: 193212511
Centisome position: 40.41
GC content: 38.62
Gene sequence:
>945_bases ATGCCTAATAAGAGGATTGTGATTATAACGAACGCAGGCTCATTTAAAGGTTCTCTAATAGAGTGGATGGCTGGCTGCTG GACTGATGCCGGTTACTCTGTAGAGTTTATTTCTAATCTGAAGACAAAGGTAGAAGCTGATATTGCTTTTCTTCATGTTG ATTTGACTCAAGTCCCATTGACTTATTTGGACTTCTCGAAAAGGTTTCCTGTTGTAATAAACAGGAATACCGACAGCATT AGTAAAGAGCTTTTCAGTAATCAGATTGTAGAACAGCCTTTTGGTTATGATGGAAAAGTGATTGTAAAAACGAAAGAAAA TTTTGGGGGTTTATCAGAGTTATACAGAGGGGATTGTTCAATAATAAGACGTAAAGCTATGGTTATAATCAGGGATATTG CTTTATCAAAATCCCTGAATAGCCGCTTTTTAAAATCTTTTTTTTGGAAAAACGTACGAATTCTCGATCCTAATAATTAT CCGATTTTCGATTCAATAAAAGATGTTCCTCCGGGGGTATGGAAAAATCCCCGCTTGATCGTAGAAAAGTTTTTACCTGA ACAGGATGCAGATGGGAGGTATGTCTTGCGGCACTGGTATTTTTTCGGTGATAAGGAGTTCAATAGAACACTATCATCTT TTAATCCAATACCAAAATGGAGCAACCTGAATGAGGAAGAGAAAAAACGGTCTCGAGAAGAATGGTGGAACATAGAAATT GTAAGTAACGCAAATGTTCCTCAAGAGGTCCGTGCTGTTCGTGAAAAACTCGGTATGGATTTTGGCAGAATAGACTGGGC TTTAAATGATGGCAAGCCAATAGTATTCGATGCAAACAAGACGCCGGGCGGGATTGGGGTAAGATCATTTGATTCAGATT TAGACCGTAAACGCCACTCTCTTATCTGCGAGTTCTCTGAGGGTGTTGAATATTTTAAGGTATAG
Upstream 100 bases:
>100_bases AGAGGCCTATCGCTTCTGTTCAAGAGACGCGACGATTACTTGGTCTGGGTACTACAATTAGCCAACATAAAATGAAGTAC TAAGTAAGATTGGTAAAGCT
Downstream 100 bases:
>100_bases TAGTTGTGTATTACCTGTATTGCGGGTGTTTTATGGCAGCCTCTCGCACTGCTTCCTGGCGGAGAGGCCTGCGTAGATTT GGGTGATCGAGAGCGAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPNKRIVIITNAGSFKGSLIEWMAGCWTDAGYSVEFISNLKTKVEADIAFLHVDLTQVPLTYLDFSKRFPVVINRNTDSI SKELFSNQIVEQPFGYDGKVIVKTKENFGGLSELYRGDCSIIRRKAMVIIRDIALSKSLNSRFLKSFFWKNVRILDPNNY PIFDSIKDVPPGVWKNPRLIVEKFLPEQDADGRYVLRHWYFFGDKEFNRTLSSFNPIPKWSNLNEEEKKRSREEWWNIEI VSNANVPQEVRAVREKLGMDFGRIDWALNDGKPIVFDANKTPGGIGVRSFDSDLDRKRHSLICEFSEGVEYFKV
Sequences:
>Translated_314_residues MPNKRIVIITNAGSFKGSLIEWMAGCWTDAGYSVEFISNLKTKVEADIAFLHVDLTQVPLTYLDFSKRFPVVINRNTDSI SKELFSNQIVEQPFGYDGKVIVKTKENFGGLSELYRGDCSIIRRKAMVIIRDIALSKSLNSRFLKSFFWKNVRILDPNNY PIFDSIKDVPPGVWKNPRLIVEKFLPEQDADGRYVLRHWYFFGDKEFNRTLSSFNPIPKWSNLNEEEKKRSREEWWNIEI VSNANVPQEVRAVREKLGMDFGRIDWALNDGKPIVFDANKTPGGIGVRSFDSDLDRKRHSLICEFSEGVEYFKV >Mature_313_residues PNKRIVIITNAGSFKGSLIEWMAGCWTDAGYSVEFISNLKTKVEADIAFLHVDLTQVPLTYLDFSKRFPVVINRNTDSIS KELFSNQIVEQPFGYDGKVIVKTKENFGGLSELYRGDCSIIRRKAMVIIRDIALSKSLNSRFLKSFFWKNVRILDPNNYP IFDSIKDVPPGVWKNPRLIVEKFLPEQDADGRYVLRHWYFFGDKEFNRTLSSFNPIPKWSNLNEEEKKRSREEWWNIEIV SNANVPQEVRAVREKLGMDFGRIDWALNDGKPIVFDANKTPGGIGVRSFDSDLDRKRHSLICEFSEGVEYFKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36337; Mature: 36206
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNKRIVIITNAGSFKGSLIEWMAGCWTDAGYSVEFISNLKTKVEADIAFLHVDLTQVPL CCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEEEHHHCCH TYLDFSKRFPVVINRNTDSISKELFSNQIVEQPFGYDGKVIVKTKENFGGLSELYRGDCS HHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHCHHH IIRRKAMVIIRDIALSKSLNSRFLKSFFWKNVRILDPNNYPIFDSIKDVPPGVWKNPRLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHCCCCCCCCCHHHH VEKFLPEQDADGRYVLRHWYFFGDKEFNRTLSSFNPIPKWSNLNEEEKKRSREEWWNIEI HHHHCCCCCCCCCEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCEEEEE VSNANVPQEVRAVREKLGMDFGRIDWALNDGKPIVFDANKTPGGIGVRSFDSDLDRKRHS EECCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH LICEFSEGVEYFKV EEEEHHCCCHHHCC >Mature Secondary Structure PNKRIVIITNAGSFKGSLIEWMAGCWTDAGYSVEFISNLKTKVEADIAFLHVDLTQVPL CCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEEEHHHCCH TYLDFSKRFPVVINRNTDSISKELFSNQIVEQPFGYDGKVIVKTKENFGGLSELYRGDCS HHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHCHHH IIRRKAMVIIRDIALSKSLNSRFLKSFFWKNVRILDPNNYPIFDSIKDVPPGVWKNPRLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHCCCCCCCCCHHHH VEKFLPEQDADGRYVLRHWYFFGDKEFNRTLSSFNPIPKWSNLNEEEKKRSREEWWNIEI HHHHCCCCCCCCCEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCEEEEE VSNANVPQEVRAVREKLGMDFGRIDWALNDGKPIVFDANKTPGGIGVRSFDSDLDRKRHS EECCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH LICEFSEGVEYFKV EEEEHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA